RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 CABP5Q9NP86 173 aa13.49□□□□□ -0.25
TREM1-201ENST00000244709 ZNF112Q9UJU3 913 aa13.49□□□□□ -0.25
TREM1-201ENST00000244709 ZBTB21Q9ULJ3 1066 aa13.49□□□□□ -0.25
TREM1-201ENST00000244709 TPCN1Q9ULQ1 816 aa13.49□□□□□ -0.25
TREM1-201ENST00000244709 PHIPQ8WWQ0 1821 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 USP2O75604 605 aaPredicted RBP13.48□□□□□ -0.25
TREM1-201ENST00000244709 LARGE1O95461 756 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 LIFRP42702 1097 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 MCM2P49736 904 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 RAB3GAP1Q15042 981 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 CCDC178Q5BJE1 867 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 NFXL1Q6ZNB6 911 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 SGMS1Q86VZ5 419 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 DGKHQ86XP1 1220 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 MTMR4Q9NYA4 1195 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 BRPF3Q9ULD4 1205 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 STX8Q9UNK0 236 aa13.48□□□□□ -0.25
TREM1-201ENST00000244709 KLF18A0A0U1RQI7 1052 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 CCDC69A6NI79 296 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 PPP1R12BO60237 982 aaPredicted RBP13.47□□□□□ -0.25
TREM1-201ENST00000244709 CTNND1O60716 968 aaKnown RBP13.47□□□□□ -0.25
TREM1-201ENST00000244709 YY1P25490 414 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 NOVP48745 357 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 ICA1Q05084 483 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.47□□□□□ -0.25
TREM1-201ENST00000244709 ANKS1AQ92625 1134 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 ZKSCAN4Q969J2 545 aaPredicted RBP13.47□□□□□ -0.25
TREM1-201ENST00000244709 ZNF408Q9H9D4 720 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 NAP1L2Q9ULW6 460 aaPredicted RBP13.47□□□□□ -0.25
TREM1-201ENST00000244709 LIMCH1Q9UPQ0 1083 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 K7ELQ4 463 aaPredicted RBP13.47□□□□□ -0.25
TREM1-201ENST00000244709 TTLL1O95922 423 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 TTLL12Q14166 644 aaPredicted RBP13.47□□□□□ -0.25
TREM1-201ENST00000244709 ME3Q16798 604 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 MOB2Q70IA6 237 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
TREM1-201ENST00000244709 RAB11FIP4Q86YS3 637 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 TMTC2Q8N394 836 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 TMX3Q96JJ7 454 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 TMEM47Q9BQJ4 181 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 KANSL2Q9H9L4 492 aa13.47□□□□□ -0.25
TREM1-201ENST00000244709 ITGBL1O95965 494 aaPredicted RBP13.46□□□□□ -0.26
TREM1-201ENST00000244709 ASNSP08243 561 aa13.46□□□□□ -0.26
TREM1-201ENST00000244709 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.26
TREM1-201ENST00000244709 EVCP57679 992 aa13.46□□□□□ -0.26
TREM1-201ENST00000244709 ATP2B2Q01814 1243 aa13.46□□□□□ -0.26
TREM1-201ENST00000244709 STK3Q13188 491 aa13.46□□□□□ -0.26
TREM1-201ENST00000244709 BECN1Q14457 450 aa13.46□□□□□ -0.26
TREM1-201ENST00000244709 SCYL3Q8IZE3 742 aa13.46□□□□□ -0.26
TREM1-201ENST00000244709 LRRC47Q8N1G4 583 aaKnown RBP13.46□□□□□ -0.26
TREM1-201ENST00000244709 MYL10Q9BUA6 226 aa13.46□□□□□ -0.26
TREM1-201ENST00000244709 KAT14Q9H8E8 782 aa13.46□□□□□ -0.26
TREM1-201ENST00000244709 CLIP2Q9UDT6 1046 aa13.46□□□□□ -0.26
TREM1-201ENST00000244709 GOLGA8BA8MQT2 603 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 TOP1P11387 765 aaKnown RBP13.45□□□□□ -0.26
TREM1-201ENST00000244709 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
TREM1-201ENST00000244709 RXRAP19793 462 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 PDIA3P30101 505 aaKnown RBP13.45□□□□□ -0.26
TREM1-201ENST00000244709 MAP3K9P80192 1104 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 MAP3K11Q16584 847 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 NOL9Q5SY16 702 aaKnown RBP13.45□□□□□ -0.26
TREM1-201ENST00000244709 APOA5Q6Q788 366 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.45□□□□□ -0.26
TREM1-201ENST00000244709 MICU3Q86XE3 530 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 SIAH1Q8IUQ4 282 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 ZNF654Q8IZM8 581 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 ZNF274Q96GC6 653 aaPredicted RBP13.45□□□□□ -0.26
TREM1-201ENST00000244709 ZSCAN31Q96LW9 406 aaPredicted RBP13.45□□□□□ -0.26
TREM1-201ENST00000244709 GINM1Q9NU53 330 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 NYAP2Q9P242 653 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 SLC12A7Q9Y666 1083 aa13.45□□□□□ -0.26
TREM1-201ENST00000244709 CELF2O95319 508 aaKnown RBP13.44□□□□□ -0.26
TREM1-201ENST00000244709 ST3GAL1Q11201 340 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 VGLL4Q14135 290 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 PPP4R3BQ5MIZ7 849 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 ARMC9Q7Z3E5 817 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 CATIPQ7Z7H3 387 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 NECAB1Q8N987 351 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 ZNF784Q8NCA9 323 aaPredicted RBP13.44□□□□□ -0.26
TREM1-201ENST00000244709 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 A0A1W2PRG0 241 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 ZBTB43O43298 467 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 PFKFB2O60825 505 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 SLC4A3P48751 1232 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 CCT2P78371 535 aaKnown RBP13.44□□□□□ -0.26
TREM1-201ENST00000244709 SCRN1Q12765 414 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 SYNE3Q6ZMZ3 975 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 RASGRP2Q7LDG7 609 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 ACER1Q8TDN7 264 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 NUP133Q8WUM0 1156 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 MKL1Q969V6 931 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 SLKQ9H2G2 1235 aaPredicted RBP13.44□□□□□ -0.26
TREM1-201ENST00000244709 ARHGEF10LQ9HCE6 1279 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 PICK1Q9NRD5 415 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
TREM1-201ENST00000244709 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
TREM1-201ENST00000244709 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
TREM1-201ENST00000244709 SNCAIPQ9Y6H5 919 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms