RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 BTBD18B2RXH4 712 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 TMTC3Q6ZXV5 915 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 FAM200AQ8TCP9 573 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 ANKS1AQ92625 1134 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 IL17RBQ9NRM6 502 aa18.46■□□□□ 0.55
ITGA4-201ENST00000233573 ZNF646O15015 1829 aaPredicted RBP18.45■□□□□ 0.54
ITGA4-201ENST00000233573 TSPY2A6NKD2 308 aa18.45■□□□□ 0.54
ITGA4-201ENST00000233573 PPP6R2O75170 966 aa18.45■□□□□ 0.54
ITGA4-201ENST00000233573 WDHD1O75717 1129 aaPredicted RBP18.45■□□□□ 0.54
ITGA4-201ENST00000233573 SCNN1DP51172 638 aa18.45■□□□□ 0.54
ITGA4-201ENST00000233573 DIS3L2Q8IYB7 885 aaKnown RBP18.45■□□□□ 0.54
ITGA4-201ENST00000233573 PPP1R1BQ9UD71 204 aaPredicted RBP18.45■□□□□ 0.54
ITGA4-201ENST00000233573 DAGLAQ9Y4D2 1042 aa18.45■□□□□ 0.54
ITGA4-201ENST00000233573 PLCD1P51178 756 aa18.45■□□□□ 0.54
ITGA4-201ENST00000233573 NDUFA8P51970 172 aa18.45■□□□□ 0.54
ITGA4-201ENST00000233573 MAPKAPK5Q8IW41 473 aa18.45■□□□□ 0.54
ITGA4-201ENST00000233573 USP25Q9UHP3 1055 aa18.45■□□□□ 0.54
ITGA4-201ENST00000233573 TTF2Q9UNY4 1162 aaKnown RBP18.45■□□□□ 0.54
ITGA4-201ENST00000233573 MYH1P12882 1939 aa18.44■□□□□ 0.54
ITGA4-201ENST00000233573 A0A1B0GVL5 298 aa18.44■□□□□ 0.54
ITGA4-201ENST00000233573 KINO60870 393 aaKnown RBP18.44■□□□□ 0.54
ITGA4-201ENST00000233573 PLCG2P16885 1265 aa18.44■□□□□ 0.54
ITGA4-201ENST00000233573 CMA1P23946 247 aa18.44■□□□□ 0.54
ITGA4-201ENST00000233573 TOB1P50616 345 aaPredicted RBP18.44■□□□□ 0.54
ITGA4-201ENST00000233573 GNL2Q13823 731 aaKnown RBP18.44■□□□□ 0.54
ITGA4-201ENST00000233573 PODNQ7Z5L7 613 aa18.44■□□□□ 0.54
ITGA4-201ENST00000233573 DGKHQ86XP1 1220 aa18.44■□□□□ 0.54
ITGA4-201ENST00000233573 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.44■□□□□ 0.54
ITGA4-201ENST00000233573 TCP11L1Q9NUJ3 509 aa18.44■□□□□ 0.54
ITGA4-201ENST00000233573 SAP30BPQ9UHR5 308 aaKnown RBP18.44■□□□□ 0.54
ITGA4-201ENST00000233573 CNTNAP5Q8WYK1 1306 aa18.44■□□□□ 0.54
ITGA4-201ENST00000233573 UTRNP46939 3433 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 POLD1P28340 1107 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 TFAP4Q01664 338 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 KIAA2012Q0VF49 1180 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 SAFBQ15424 915 aaKnown RBP eCLIP18.43■□□□□ 0.54
ITGA4-201ENST00000233573 ANO6Q4KMQ2 910 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 SLF2Q8IX21 1173 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 SUGT1Q9Y2Z0 365 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 AP5Z1O43299 807 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 PPIP5K2O43314 1243 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 CCDC93Q567U6 631 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 CC2D2BQ6DHV5 1058 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 SASS6Q6UVJ0 657 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 TEX11Q8IYF3 940 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 SRBD1Q8N5C6 995 aaKnown RBP18.43■□□□□ 0.54
ITGA4-201ENST00000233573 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
ITGA4-201ENST00000233573 FLT1P17948 1338 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 FAM237AA0A1B0GTK4 181 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 MARCKSP29966 332 aaPredicted RBP18.42■□□□□ 0.54
ITGA4-201ENST00000233573 AMOTL1Q8IY63 956 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 OXER1Q8TDS5 423 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 PHF20Q9BVI0 1012 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 V9GY48 417 aaPredicted RBP18.42■□□□□ 0.54
ITGA4-201ENST00000233573 RASA1P20936 1047 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 CLCN1P35523 988 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 NR5A1Q13285 461 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 DACT2Q5SW24 774 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 SLC44A5Q8NCS7 719 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 CBX8Q9HC52 389 aa18.42■□□□□ 0.54
ITGA4-201ENST00000233573 COL4A5P29400 1685 aa18.41■□□□□ 0.54
ITGA4-201ENST00000233573 YDJCA8MPS7 323 aa18.41■□□□□ 0.54
ITGA4-201ENST00000233573 ADCY5O95622 1261 aa18.41■□□□□ 0.54
ITGA4-201ENST00000233573 AKAP17AQ02040 695 aaKnown RBP18.41■□□□□ 0.54
ITGA4-201ENST00000233573 C16orf86Q6ZW13 317 aa18.41■□□□□ 0.54
ITGA4-201ENST00000233573 ZSCAN30Q86W11 494 aa18.41■□□□□ 0.54
ITGA4-201ENST00000233573 KIAA0825Q8IV33 1275 aa18.41■□□□□ 0.54
ITGA4-201ENST00000233573 CTCFLQ8NI51 663 aaPredicted RBP18.41■□□□□ 0.54
ITGA4-201ENST00000233573 ZNF277Q9NRM2 450 aaPredicted RBP18.41■□□□□ 0.54
ITGA4-201ENST00000233573 HPSEQ9Y251 543 aa18.41■□□□□ 0.54
ITGA4-201ENST00000233573 PCDHAC2Q9Y5I4 1007 aa18.41■□□□□ 0.54
ITGA4-201ENST00000233573 PFKFB1P16118 471 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 NPY5RQ15761 445 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 RILPL1Q5EBL4 403 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 SHC4Q6S5L8 630 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 LUZP1Q86V48 1076 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 JMYQ8N9B5 988 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 MKNK2Q9HBH9 465 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.4■□□□□ 0.54
ITGA4-201ENST00000233573 VPS54Q9P1Q0 977 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 hCG_1642624A0A1W2PR95 340 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 CAVIN2O95810 425 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 CCDC178Q5BJE1 867 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 STRIP1Q5VSL9 837 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 SUPT20HQ8NEM7 779 aa18.4■□□□□ 0.54
ITGA4-201ENST00000233573 NOL7Q9UMY1 257 aaKnown RBP18.4■□□□□ 0.54
ITGA4-201ENST00000233573 USP17L3A6NCW0 530 aa18.39■□□□□ 0.53
ITGA4-201ENST00000233573 USP17L4A6NCW7 530 aa18.39■□□□□ 0.53
ITGA4-201ENST00000233573 ZNF202O95125 648 aa18.39■□□□□ 0.53
ITGA4-201ENST00000233573 USP17L1Q7RTZ2 530 aa18.39■□□□□ 0.53
ITGA4-201ENST00000233573 SGIP1Q9BQI5 828 aa18.39■□□□□ 0.53
ITGA4-201ENST00000233573 DNAJC25Q9H1X3 360 aa18.39■□□□□ 0.53
ITGA4-201ENST00000233573 KAT14Q9H8E8 782 aa18.39■□□□□ 0.53
ITGA4-201ENST00000233573 PIM2Q9P1W9 311 aa18.39■□□□□ 0.53
ITGA4-201ENST00000233573 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.53
ITGA4-201ENST00000233573 TSPY3P0CV98 308 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 TSPY8P0CW00 308 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 XBP1P17861 261 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 CDK8P49336 464 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 TGFB2P61812 414 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms