RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 NLRP2Q9NX02 1062 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 EXOC5O00471 708 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 NR5A1Q13285 461 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 MMS19Q96T76 1030 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 SAMM50Q9Y512 469 aa16.04■□□□□ 0.16
SHPK-201ENST00000225519 PXDNQ92626 1479 aa16.03■□□□□ 0.16
SHPK-201ENST00000225519 UBXN1Q04323 297 aa16.03■□□□□ 0.16
SHPK-201ENST00000225519 SARSP49591 514 aaKnown RBP16.03■□□□□ 0.16
SHPK-201ENST00000225519 SND1Q7KZF4 910 aaKnown RBP eCLIP16.03■□□□□ 0.16
SHPK-201ENST00000225519 TBC1D10CQ8IV04 446 aa16.03■□□□□ 0.16
SHPK-201ENST00000225519 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
SHPK-201ENST00000225519 GNL3LQ9NVN8 582 aaKnown RBP16.03■□□□□ 0.16
SHPK-201ENST00000225519 CPDO75976 1380 aa16.03■□□□□ 0.16
SHPK-201ENST00000225519 CDHR2Q9BYE9 1310 aa16.03■□□□□ 0.16
SHPK-201ENST00000225519 RANBP6O60518 1105 aaKnown RBP16.03■□□□□ 0.16
SHPK-201ENST00000225519 SUGP1Q8IWZ8 645 aaKnown RBP16.03■□□□□ 0.16
SHPK-201ENST00000225519 CMTR1Q8N1G2 835 aaKnown RBP16.03■□□□□ 0.16
SHPK-201ENST00000225519 SELENOOQ9BVL4 669 aa16.03■□□□□ 0.16
SHPK-201ENST00000225519 CD44P16070 742 aaKnown RBP16.02■□□□□ 0.16
SHPK-201ENST00000225519 MATR3P43243 847 aaKnown RBP eCLIP16.02■□□□□ 0.16
SHPK-201ENST00000225519 TEX2Q8IWB9 1127 aa16.02■□□□□ 0.16
SHPK-201ENST00000225519 PCMTD1Q96MG8 357 aaPredicted RBP16.02■□□□□ 0.16
SHPK-201ENST00000225519 ZBTB3Q9H5J0 574 aa16.02■□□□□ 0.16
SHPK-201ENST00000225519 SLC52A2Q9HAB3 445 aa16.02■□□□□ 0.16
SHPK-201ENST00000225519 HEG1Q9ULI3 1381 aa16.02■□□□□ 0.16
SHPK-201ENST00000225519 AARSP49588 968 aaKnown RBP eCLIP16.02■□□□□ 0.16
SHPK-201ENST00000225519 TMEM87BQ96K49 555 aa16.02■□□□□ 0.16
SHPK-201ENST00000225519 CHP1Q99653 195 aa16.02■□□□□ 0.16
SHPK-201ENST00000225519 MRC1P22897 1456 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.15
SHPK-201ENST00000225519 KCNA6P17658 529 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 IRAK1P51617 712 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 KRT31Q15323 416 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 NT5DC1Q5TFE4 455 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 IQCEQ6IPM2 695 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 POTEDQ86YR6 584 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 EPSTI1Q96J88 318 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 CAPN7Q9Y6W3 813 aa16.02■□□□□ 0.15
SHPK-201ENST00000225519 NDUFA10O95299 355 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 MMP1P03956 469 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 ATP1A1P05023 1023 aaKnown RBP16.01■□□□□ 0.15
SHPK-201ENST00000225519 ARHGAP25P42331 645 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 FOXO4P98177 505 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 NBPF14Q5TI25 921 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 JAKMIP2Q96AA8 810 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 MAPK8IP1Q9UQF2 711 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 KDM3BQ7LBC6 1761 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 TRIM75PA6NK02 468 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 NDUFAB1O14561 156 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 GUCY1A2P33402 732 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 TOB1P50616 345 aaPredicted RBP16.01■□□□□ 0.15
SHPK-201ENST00000225519 SPAG1Q07617 926 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 PPFIA1Q13136 1202 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 SCARF1Q14162 830 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 RTN1Q16799 776 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 ELOA2Q8IYF1 753 aaPredicted RBP16.01■□□□□ 0.15
SHPK-201ENST00000225519 EHD4Q9H223 541 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 HAUS4Q9H6D7 363 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 INCENPQ9NQS7 918 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 TBX22Q9Y458 520 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 SRPRBQ9Y5M8 271 aaKnown RBP16.01■□□□□ 0.15
SHPK-201ENST00000225519 ERICH2A1L162 156 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 PRPF6O94906 941 aaKnown RBP16.01■□□□□ 0.15
SHPK-201ENST00000225519 RDXP35241 583 aaKnown RBP16.01■□□□□ 0.15
SHPK-201ENST00000225519 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 OTUD6BQ8N6M0 293 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 ZKSCAN3Q9BRR0 538 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 BLZF1Q9H2G9 400 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 TFR2Q9UP52 801 aa16.01■□□□□ 0.15
SHPK-201ENST00000225519 LUC7L2Q9Y383 392 aaKnown RBP16.01■□□□□ 0.15
SHPK-201ENST00000225519 FOXP2O15409 715 aa16■□□□□ 0.15
SHPK-201ENST00000225519 IBSPP21815 317 aaPredicted RBP16■□□□□ 0.15
SHPK-201ENST00000225519 COPB1P53618 953 aaKnown RBP16■□□□□ 0.15
SHPK-201ENST00000225519 FKBP15Q5T1M5 1219 aa16■□□□□ 0.15
SHPK-201ENST00000225519 CEP89Q96ST8 783 aa16■□□□□ 0.15
SHPK-201ENST00000225519 KRT86O43790 486 aa16■□□□□ 0.15
SHPK-201ENST00000225519 ZEB2O60315 1214 aa16■□□□□ 0.15
SHPK-201ENST00000225519 CPP00450 1065 aa16■□□□□ 0.15
SHPK-201ENST00000225519 HNRNPH1P31943 449 aaKnown RBP16■□□□□ 0.15
SHPK-201ENST00000225519 TRIM14Q14142 442 aa16■□□□□ 0.15
SHPK-201ENST00000225519 ZNHIT6Q9NWK9 470 aaKnown RBP16■□□□□ 0.15
SHPK-201ENST00000225519 GCP02774 474 aa16■□□□□ 0.15
SHPK-201ENST00000225519 CSB-PGBD3P0DP91 1061 aa16■□□□□ 0.15
SHPK-201ENST00000225519 ATP6V1AP38606 617 aa16■□□□□ 0.15
SHPK-201ENST00000225519 AIDAQ96BJ3 306 aa16■□□□□ 0.15
SHPK-201ENST00000225519 PAGE5Q96GU1 130 aa16■□□□□ 0.15
SHPK-201ENST00000225519 CXorf56Q9H5V9 222 aa16■□□□□ 0.15
SHPK-201ENST00000225519 WDR19Q8NEZ3 1342 aa16■□□□□ 0.15
SHPK-201ENST00000225519 MED1Q15648 1581 aaPredicted RBP15.99■□□□□ 0.15
SHPK-201ENST00000225519 IDEP14735 1019 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 AMPD2Q01433 879 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 EHBP1Q8NDI1 1231 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 DIP2AQ14689 1571 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 MACROD2A1Z1Q3 448 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 C2orf54Q08AI8 447 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 TTF1Q15361 905 aaPredicted RBP15.99■□□□□ 0.15
SHPK-201ENST00000225519 TRAPPC11Q7Z392 1133 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 419.9 ms