RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SHISA4Q96DD7 197 aa34.22■■■■□ 3.07
PABPN1-201ENST00000216727 SAP30BPQ9UHR5 308 aaKnown RBP34.22■■■■□ 3.07
PABPN1-201ENST00000216727 TSPY3P0CV98 308 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 TSPY8P0CW00 308 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 PFKFB1P16118 471 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 C16orf86Q6ZW13 317 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 SDF4Q9BRK5 362 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 DAGLAQ9Y4D2 1042 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 CUTAO60888 179 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 ZNF165P49910 485 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 NR5A1Q13285 461 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 OLFM4Q6UX06 510 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 VPS54Q9P1Q0 977 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 HPSEQ9Y251 543 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 QSER1Q2KHR3 1735 aa34.21■■■■□ 3.07
PABPN1-201ENST00000216727 ZNF202O95125 648 aa34.2■■■■□ 3.07
PABPN1-201ENST00000216727 RASA1P20936 1047 aa34.2■■■■□ 3.07
PABPN1-201ENST00000216727 MSL1Q68DK7 614 aa34.2■■■■□ 3.07
PABPN1-201ENST00000216727 LUZP1Q86V48 1076 aa34.2■■■■□ 3.07
PABPN1-201ENST00000216727 TIGD1Q96MW7 591 aa34.2■■■■□ 3.07
PABPN1-201ENST00000216727 DNAJC25Q9H1X3 360 aa34.2■■■■□ 3.07
PABPN1-201ENST00000216727 OXER1Q8TDS5 423 aa34.2■■■■□ 3.06
PABPN1-201ENST00000216727 EYA3Q99504 573 aa34.2■■■■□ 3.06
PABPN1-201ENST00000216727 PNMA1Q8ND90 353 aa34.19■■■■□ 3.06
PABPN1-201ENST00000216727 FOCADQ5VW36 1801 aa34.19■■■■□ 3.06
PABPN1-201ENST00000216727 KRT2P35908 639 aa34.18■■■■□ 3.06
PABPN1-201ENST00000216727 RESP18Q5W5W9 173 aa34.18■■■■□ 3.06
PABPN1-201ENST00000216727 SHC4Q6S5L8 630 aa34.18■■■■□ 3.06
PABPN1-201ENST00000216727 SLC44A5Q8NCS7 719 aa34.18■■■■□ 3.06
PABPN1-201ENST00000216727 STYK1Q6J9G0 422 aa34.18■■■■□ 3.06
PABPN1-201ENST00000216727 MORC2Q9Y6X9 1032 aaPredicted RBP34.18■■■■□ 3.06
PABPN1-201ENST00000216727 AP5Z1O43299 807 aa34.17■■■■□ 3.06
PABPN1-201ENST00000216727 CDK8P49336 464 aa34.17■■■■□ 3.06
PABPN1-201ENST00000216727 CERS5Q8N5B7 392 aa34.17■■■■□ 3.06
PABPN1-201ENST00000216727 KRI1Q8N9T8 703 aaKnown RBP34.17■■■■□ 3.06
PABPN1-201ENST00000216727 ANO10Q9NW15 660 aa34.17■■■■□ 3.06
PABPN1-201ENST00000216727 USP17L3A6NCW0 530 aa34.16■■■■□ 3.06
PABPN1-201ENST00000216727 USP17L4A6NCW7 530 aa34.16■■■■□ 3.06
PABPN1-201ENST00000216727 USP17L1Q7RTZ2 530 aa34.16■■■■□ 3.06
PABPN1-201ENST00000216727 C2CD5Q86YS7 1000 aa34.16■■■■□ 3.06
PABPN1-201ENST00000216727 ZNF622Q969S3 477 aaKnown RBP eCLIP34.16■■■■□ 3.062e-8■■□□□ 11.7
PABPN1-201ENST00000216727 MYH1P12882 1939 aa34.16■■■■□ 3.06
PABPN1-201ENST00000216727 hCG_1642624A0A1W2PR95 340 aa34.16■■■■□ 3.06
PABPN1-201ENST00000216727 BRMS1Q9HCU9 246 aa34.16■■■■□ 3.06
PABPN1-201ENST00000216727 KIAA1468Q9P260 1216 aa34.16■■■■□ 3.06
PABPN1-201ENST00000216727 CEP131Q9UPN4 1083 aa34.16■■■■□ 3.06
PABPN1-201ENST00000216727 MSNP26038 577 aaKnown RBP34.15■■■■□ 3.06
PABPN1-201ENST00000216727 SYKP43405 635 aa34.15■■■■□ 3.06
PABPN1-201ENST00000216727 GRM4Q14833 912 aa34.15■■■■□ 3.06
PABPN1-201ENST00000216727 PFKFB3Q16875 520 aaPredicted RBP34.15■■■■□ 3.06
PABPN1-201ENST00000216727 ZKSCAN5Q9Y2L8 839 aa34.15■■■■□ 3.06
PABPN1-201ENST00000216727 SNED1Q8TER0 1413 aa34.15■■■■□ 3.06
PABPN1-201ENST00000216727 PTMAP06454 111 aaKnown RBP34.14■■■■□ 3.06
PABPN1-201ENST00000216727 SCG2P13521 617 aa34.14■■■■□ 3.06
PABPN1-201ENST00000216727 GNAQP50148 359 aa34.14■■■■□ 3.06
PABPN1-201ENST00000216727 CABP5Q9NP86 173 aa34.14■■■■□ 3.06
PABPN1-201ENST00000216727 H0YIN7 160 aa34.14■■■■□ 3.06
PABPN1-201ENST00000216727 NEDD1Q8NHV4 660 aa34.14■■■■□ 3.06
PABPN1-201ENST00000216727 PTPREP23469 700 aa34.13■■■■□ 3.05
PABPN1-201ENST00000216727 NPY5RQ15761 445 aa34.13■■■■□ 3.05
PABPN1-201ENST00000216727 SLC15A2Q16348 729 aa34.13■■■■□ 3.05
PABPN1-201ENST00000216727 DOK7Q18PE1 504 aa34.13■■■■□ 3.05
PABPN1-201ENST00000216727 FBXW7Q969H0 707 aa34.13■■■■□ 3.05
PABPN1-201ENST00000216727 TTF2Q9UNY4 1162 aaKnown RBP34.13■■■■□ 3.05
PABPN1-201ENST00000216727 IQCB1Q15051 598 aa34.13■■■■□ 3.05
PABPN1-201ENST00000216727 PODNQ7Z5L7 613 aa34.13■■■■□ 3.05
PABPN1-201ENST00000216727 CLIC6Q96NY7 704 aa34.13■■■■□ 3.05
PABPN1-201ENST00000216727 EIF2AK3Q9NZJ5 1116 aaKnown RBP34.13■■■■□ 3.05
PABPN1-201ENST00000216727 PCDHB6Q9Y5E3 794 aa34.13■■■■□ 3.05
PABPN1-201ENST00000216727 PLCB2Q00722 1185 aa34.12■■■■□ 3.05
PABPN1-201ENST00000216727 C11orf57Q6ZUT1 292 aaPredicted RBP34.12■■■■□ 3.05
PABPN1-201ENST00000216727 TNFRSF25Q93038 417 aa34.12■■■■□ 3.05
PABPN1-201ENST00000216727 TMEM47Q9BQJ4 181 aa34.11■■■■□ 3.05
PABPN1-201ENST00000216727 ANO8Q9HCE9 1232 aaPredicted RBP34.11■■■■□ 3.05
PABPN1-201ENST00000216727 FBXO2Q9UK22 296 aaPredicted RBP34.11■■■■□ 3.05
PABPN1-201ENST00000216727 ZNF579Q8NAF0 562 aaKnown RBP34.11■■■■□ 3.05
PABPN1-201ENST00000216727 CAMKK2Q96RR4 588 aa34.11■■■■□ 3.05
PABPN1-201ENST00000216727 RGS17Q9UGC6 210 aaPredicted RBP34.11■■■■□ 3.05
PABPN1-201ENST00000216727 MAD2L2Q9UI95 211 aa34.11■■■■□ 3.05
PABPN1-201ENST00000216727 G3V3G9 751 aa34.1■■■■□ 3.05
PABPN1-201ENST00000216727 DCAF8Q5TAQ9 597 aa34.1■■■■□ 3.05
PABPN1-201ENST00000216727 HHIPL2Q6UWX4 724 aa34.1■■■■□ 3.05
PABPN1-201ENST00000216727 STX8Q9UNK0 236 aa34.09■■■■□ 3.05
PABPN1-201ENST00000216727 SH3GLB2Q9NR46 395 aa34.09■■■■□ 3.05
PABPN1-201ENST00000216727 SRPRBQ9Y5M8 271 aaKnown RBP34.09■■■■□ 3.05
PABPN1-201ENST00000216727 TRIM75PA6NK02 468 aa34.08■■■■□ 3.05
PABPN1-201ENST00000216727 F8W031 263 aaPredicted RBP34.08■■■■□ 3.05
PABPN1-201ENST00000216727 NOVP48745 357 aa34.08■■■■□ 3.05
PABPN1-201ENST00000216727 CEP57L1Q8IYX8 460 aa34.08■■■■□ 3.05
PABPN1-201ENST00000216727 NAT10Q9H0A0 1025 aaKnown RBP34.08■■■■□ 3.05
PABPN1-201ENST00000216727 KCNH3Q9ULD8 1083 aa34.08■■■■□ 3.05
PABPN1-201ENST00000216727 ELOA2Q8IYF1 753 aaPredicted RBP34.08■■■■□ 3.05
PABPN1-201ENST00000216727 STAG2Q8N3U4 1231 aa34.08■■■■□ 3.05
PABPN1-201ENST00000216727 ERCC4Q92889 916 aaPredicted RBP34.08■■■■□ 3.05
PABPN1-201ENST00000216727 LZTS2Q9BRK4 669 aa34.08■■■■□ 3.05
PABPN1-201ENST00000216727 STK32BQ9NY57 414 aa34.08■■■■□ 3.05
PABPN1-201ENST00000216727 BMP15O95972 392 aa34.07■■■■□ 3.04
PABPN1-201ENST00000216727 EZH2Q15910 746 aaKnown RBP34.07■■■■□ 3.04
PABPN1-201ENST00000216727 PALM3A6NDB9 673 aaPredicted RBP34.06■■■■□ 3.04
PABPN1-201ENST00000216727 FKBP1AP62942 108 aaKnown RBP34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms