RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SLAIN2Q9P270 581 aa11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 CDC23Q9UJX2 597 aa11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 CEP131Q9UPN4 1083 aa11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 PDE8BO95263 885 aa11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 DEXIO95424 95 aa11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 BRD3Q15059 726 aa11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 FILIP1LQ4L180 1135 aa11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 WWC2Q6AWC2 1192 aa11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 ELOA2Q8IYF1 753 aaPredicted RBP11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 SLC35F6Q8N357 371 aa11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 CDC5LQ99459 802 aaKnown RBP11.94□□□□□ -0.5
CX3CL1-201ENST00000006053 A0A087X0B3 334 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 TCRBV5S4A2TA0A5A2 114 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 ERCC5P28715 1186 aaPredicted RBP11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 SPATA1Q5VX52 437 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 CRACR2BQ8N4Y2 399 aaPredicted RBP11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 PNKPQ96T60 521 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 KRT23Q9C075 422 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 VPS54Q9P1Q0 977 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 TRMT112Q9UI30 125 aaKnown RBP11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 IRS4O14654 1257 aaPredicted RBP11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 CTSWP56202 376 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 MAP3K12Q12852 859 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 CEP112Q8N8E3 955 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 MIGA1Q8NAN2 632 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 PLA2G12BQ9BX93 195 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 CNNM2Q9H8M5 875 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 ANKZF1Q9H8Y5 726 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 SLC4A4Q9Y6R1 1079 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 GLI3P10071 1580 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 CTAGE9A4FU28 777 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 ABL1P00519 1130 aa11.93□□□□□ -0.5
CX3CL1-201ENST00000006053 TRIM75PA6NK02 468 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 MFAP3LO75121 409 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 PRDM1O75626 825 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 UQCRFS1P1P0C7P4 283 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 TRIM28Q13263 835 aaKnown RBP11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 SPATA5Q8NB90 893 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 ABCB6Q9NP58 842 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 ADD3Q9UEY8 706 aaKnown RBP11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 CTNND2Q9UQB3 1225 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 GSG1L2A8MUP6 293 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 MINDY4BA8MYZ0 360 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 CDC25AP30304 524 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 APTXQ7Z2E3 356 aaKnown RBP11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 NLRP10Q86W26 655 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 C10orf67Q8IYJ2 551 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 ZNF654Q8IZM8 581 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 LCORLQ8N3X6 602 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 FANCBQ8NB91 859 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 SYMPKQ92797 1274 aaKnown RBP11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 PAGE5Q96GU1 130 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 UBAC1Q9BSL1 405 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 VPS16Q9H269 839 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 RASSF4Q9H2L5 321 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 TMOD3Q9NYL9 352 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 LAMB4A4D0S4 1761 aa11.92□□□□□ -0.5
CX3CL1-201ENST00000006053 CCDC196A0A1B0GTZ2 297 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 N4BP3O15049 544 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 N4BP1O75113 896 aaKnown RBP11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 PHACTR2O75167 634 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 ERLIN1O75477 346 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 ALX1Q15699 326 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 BEND6Q5SZJ8 279 aaPredicted RBP11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 HDXQ7Z353 690 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 VGLL2Q8N8G2 317 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 NAA15Q9BXJ9 866 aaKnown RBP11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 NACAP1Q9BZK3 213 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 BLZF1Q9H2G9 400 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 ASAP1Q9ULH1 1129 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 ZNF174Q15697 407 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 EARS2Q5JPH6 523 aaKnown RBP11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 CCDC102AQ96A19 550 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 EXOC4Q96A65 974 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 NUP88Q99567 741 aaPredicted RBP11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 MAP2K7O14733 419 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 GYPCP04921 128 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 RASGRF1Q13972 1273 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 ZNF512BQ96KM6 892 aaPredicted RBP11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
CX3CL1-201ENST00000006053 MAP3K15Q6ZN16 1313 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 CTAGE15A4D2H0 777 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 CTAGE8P0CG41 777 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 ARID4AP29374 1257 aaPredicted RBP11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 CUL4BQ13620 913 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 RASGRP2Q7LDG7 609 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 CTAGE6Q86UF2 777 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 CNGA4Q8IV77 575 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 CTAGE4Q8IX94 777 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 SPATA20Q8TB22 786 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 MYCBPQ99417 103 aaPredicted RBP11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 SLF1Q9BQI6 1058 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 CWC15Q9P013 229 aaKnown RBP11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 ATRNO75882 1429 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 MYH7P12883 1935 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms