RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Ccdc162pQ0VG85 912 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 DbnlQ62418 436 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 PicalmQ7M6Y3 660 aaKnown RBP10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 SybuQ8BHS8 665 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Stx19Q8R1Q0 292 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Cnpy2Q9QXT0 182 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Lzts3A2AHG0 700 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Surf6P70279 355 aaKnown RBP10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Nucb1Q02819 459 aaKnown RBP10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Zc3h12cQ5DTV4 884 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 LgsnQ8CIX8 563 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 NonoQ99K48 473 aaKnown RBP10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Krt27Q9Z320 448 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Abtb2Q7TQI7 1024 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Cd2bp2Q9CWK3 342 aaKnown RBP10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Phldb3E9QAF4 648 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 GsnP13020 780 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ppp1r15aP17564 657 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Nkx1-2P42580 305 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 OtulinQ3UCV8 352 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Atp12aQ9Z1W8 1035 aa10.25□□□□□ -0.77
Col6a5-201ENSMUST00000165165 E4f1Q8CCE9 783 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Adi1Q99JT9 179 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Dph5Q9CWQ0 281 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Eef1gQ9D8N0 437 aaKnown RBP10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Slc13a1Q9JHI4 594 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ppp2r3dQ9Z176 491 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 RpsaP14206 295 aaKnown RBP10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Yipf3Q3UDR8 347 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gm14685Q52KH6 695 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Arhgap10Q6Y5D8 786 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ppp6r3Q922D4 844 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gm5936A2BG95 728 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gm5640A3KG49 728 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Apol11aE9PZG0 334 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ms4a1P19437 291 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Hcls1P49710 486 aaKnown RBP10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tbx22Q8K402 517 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Acsbg1Q99PU5 721 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Pcf11G3X9Z4 1553 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Akap5D3YVF0 745 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gm4297D3YWB7 211 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 F2rP30558 430 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Bag5Q8CI32 447 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Myl7Q9QVP4 175 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Cfap36Q8C6E0 343 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Sar1bQ9CQC9 198 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Hdac4Q6NZM9 1076 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Lyve1Q8BHC0 318 aa10.24□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ola1Q9CZ30 396 aaKnown RBP10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Rgs3Q9DC04 966 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 AW822073A0A0N4SUK1 652 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gbp4A4UUI3 631 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Nup58Q8R332 587 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mylk2Q8VCR8 613 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Sugt1Q9CX34 336 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Trim42Q9D2H5 723 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mcf2A2AEU1 1111 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gm10354K7N6A0 256 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Stx1bP61264 288 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Wdr44Q6NVE8 915 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ccdc85bQ6PDY0 202 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Fam160b2Q80YR2 744 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Spdl1Q923A2 608 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mroh2bQ7M6Y6 1581 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Evi5P97366 809 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Nr1h4Q60641 488 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 InsrP15208 1372 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 ByslO54825 436 aaKnown RBP10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 InhbaQ04998 424 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Enox1Q8BHR2 643 aaKnown RBP10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 NelfbQ8C4Y3 580 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 ParnQ8VDG3 624 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Prc1Q99K43 603 aaKnown RBP10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 4930449I24RikQ9D5E3 319 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Azi2Q9QYP6 405 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Bnip3lQ9Z2F7 218 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Tbc1d4Q8BYJ6 1307 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Gm6121L7MUF1 212 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 EmbP21995 330 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ankrd45Q810N6 248 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Mrps22Q9CXW2 359 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Slx4ipQ9D7Y9 413 aa10.23□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Atf2P16951 487 aaKnown RBP10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Zswim7Q9CWQ2 152 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Dydc2Q9D3X8 139 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Sos2Q02384 1333 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Pdcd2P46718 343 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Trim38Q5SZ99 471 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Foxd4Q60688 444 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ankle2Q6P1H6 964 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Efcab14Q8BGQ6 484 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Nol11Q8BJW5 723 aaKnown RBP10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 SmtnQ921U8 923 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ccdc103Q9D9P2 237 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Nfil3O08750 462 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Ddit3P35639 168 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 G3bp2P97379 482 aaKnown RBP10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 Slc7a6osQ7TPE5 306 aa10.22□□□□□ -0.77
Col6a5-201ENSMUST00000165165 MgarpQ8VI64 283 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms