RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Prkab1Q9R078 270 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 SmapQ9R0P4 181 aaKnown RBP16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Clip2Q9Z0H8 1047 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Plcg1Q62077 1302 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Atp8b3Q6UQ17 1335 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Pus7B7ZNL8 666 aaKnown RBP16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Lipo1J3QME6 396 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Rfpl4bJ3QPR6 266 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 DaxxO35613 739 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 QarsQ8BML9 775 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Jakmip1Q8BVL9 626 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Lrch3Q8BVU0 778 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 MyocdQ8VIM5 935 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Tomm22Q9CPQ3 142 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Zbtb43Q9DAI4 467 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Eid1Q9DCR4 169 aa16.59■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Zscan18E9PUD6 809 aa16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 A430078G23RikE9Q7Y4 484 aa16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Fam83hQ148V8 1209 aa16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Glra4Q61603 456 aa16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Gba2Q69ZF3 918 aa16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Tekt3Q6X6Z7 490 aa16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Tacc1Q6Y685 774 aa16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Scfd1Q8BRF7 639 aaKnown RBP16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 H2-Q4Q8HWB2 354 aa16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Itm2cQ91VK4 269 aa16.58■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Tbc1d8bA3KGB4 1114 aa16.57■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Lamp1P11438 406 aaKnown RBP16.57■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Dync1li2Q6PDL0 492 aaKnown RBP16.57■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Krt84Q99M73 603 aa16.57■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Tdrd1Q99MV1 1172 aa16.57■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Mov10l1Q99MV5 1187 aa16.57■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Med23Q80YQ2 1367 aa16.57■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Anp32aO35381 247 aa16.56■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Prdm1Q60636 856 aa16.56■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Usp50Q6P8X6 390 aa16.56■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 GorabQ8BRM2 368 aa16.56■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Pcdhb22Q91XZ8 794 aa16.56■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Traf7Q922B6 594 aa16.56■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Trmt112Q9DCG9 125 aa16.56■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Nudt12Q9DCN1 462 aa16.56■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Ngly1Q9JI78 651 aa16.56■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Trim30dE9PWL0 497 aa16.55■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Alppl2P24823 529 aa16.55■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Pald1P70261 859 aa16.55■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Cnnm2Q3TWN3 875 aa16.55■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Dll1Q61483 722 aa16.55■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Pip5kl1Q6U7H8 395 aa16.55■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Slc18a1Q8R090 521 aa16.55■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Ttll1Q91V51 423 aa16.55■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Brca1P48754 1812 aa16.55■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Rnf123Q5XPI3 1314 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Ccdc183A2AJB1 534 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 B020004C17RikJ3QP07 232 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 NefhP19246 1090 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Nbr1P97432 988 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 PcQ05920 1178 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Slc44a1Q6X893 653 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 DlatQ8BMF4 642 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Atad2Q8CDM1 1040 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Pus7lQ8CE46 702 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Defb15Q8R2I5 79 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Mettl16Q9CQG2 553 aaKnown RBP16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Fsip1Q9D3V5 435 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Tmem47Q9JJG6 181 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Usp14Q9JMA1 493 aaKnown RBP16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Dicer1Q8R418 1916 aa16.54■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Fam71e1A1L3C1 212 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Kcnb2A6H8H5 907 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Gm29094F6Q785 221 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Cyp2b10P12791 500 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Ppm1jQ149T7 507 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Slc16a10Q3U9N9 512 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Dppa3Q8QZY3 150 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Srgap1Q91Z69 1062 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Nop2Q922K7 793 aaKnown RBP16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Vta1Q9CR26 309 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Hmg20bQ9Z104 317 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Fndc3c1Q6DFV6 1356 aa16.53■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Irgm2A0A140LIF8 407 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Rexo5D3YW29 759 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Sec23aQ01405 765 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Rnf20Q5DTM8 973 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Myl10Q62082 202 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Slc45a1Q8BIV7 751 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Terb1Q8C0V1 768 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Ccdc158Q8CDI6 1109 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Atf7Q8R0S1 413 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 C1qtnf12Q8R2Z0 308 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Lonrf3Q9D4H7 753 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Sapcd2Q9D818 391 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Dock5B2RY04 1868 aa16.52■□□□□ 0.24
Ccdc171-204ENSMUST00000126429 Prr16A3KMN5 304 aa16.51■□□□□ 0.23
Ccdc171-204ENSMUST00000126429 Myl3P09542 204 aa16.51■□□□□ 0.23
Ccdc171-204ENSMUST00000126429 Sp4Q62445 782 aa16.51■□□□□ 0.23
Ccdc171-204ENSMUST00000126429 Sgsm2Q80U12 1005 aa16.51■□□□□ 0.23
Ccdc171-204ENSMUST00000126429 Nek9Q8K1R7 984 aa16.51■□□□□ 0.23
Ccdc171-204ENSMUST00000126429 Usp5P56399 858 aaKnown RBP16.51■□□□□ 0.23
Ccdc171-204ENSMUST00000126429 Exosc10P56960 887 aaKnown RBP16.51■□□□□ 0.23
Ccdc171-204ENSMUST00000126429 Sfi1Q3UZY0 1216 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms