RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Elp3Q9CZX0 547 aa19.04■□□□□ 0.64
Tpm1-215ENSMUST00000113705 SmapQ9R0P4 181 aaKnown RBP19.04■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Zscan18E9PUD6 809 aa19.03■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Fgfr2P21803 821 aa19.03■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Ccdc174Q3U155 467 aa19.03■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Scfd1Q8BRF7 639 aaKnown RBP19.03■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Defb15Q8R2I5 79 aa19.03■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Tdrd1Q99MV1 1172 aa19.03■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Zbtb43Q9DAI4 467 aa19.03■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Usp14Q9JMA1 493 aaKnown RBP19.03■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Alppl2P24823 529 aa19.02■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Prdm1Q60636 856 aa19.02■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Usp50Q6P8X6 390 aa19.02■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Usp44Q8C2S0 711 aa19.02■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Krt84Q99M73 603 aa19.02■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Lonrf3Q9D4H7 753 aa19.02■□□□□ 0.64
Tpm1-215ENSMUST00000113705 Rad50P70388 1312 aa19.02■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Copb2O55029 905 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 SelpQ01102 768 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Htatsf1Q8BGC0 757 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 QarsQ8BML9 775 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Ttll1Q91V51 423 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Anapc15-psA0A140T8L6 141 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Casp12O08736 419 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Myl3P09542 204 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Clul1Q3ZRW6 464 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 DlatQ8BMF4 642 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 GorabQ8BRM2 368 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Jakmip1Q8BVL9 626 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Dppa3Q8QZY3 150 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Trmt112Q9DCG9 125 aa19.01■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Lipo1J3QME6 396 aa19■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Usp5P56399 858 aaKnown RBP19■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Slc16a10Q3U9N9 512 aa19■□□□□ 0.63
Tpm1-215ENSMUST00000113705 HlcsQ920N2 722 aa19■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Vta1Q9CR26 309 aa19■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Cyp3a59D3Z2W7 503 aa18.99■□□□□ 0.63
Tpm1-215ENSMUST00000113705 B020004C17RikJ3QP07 232 aa18.99■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Myl10Q62082 202 aa18.99■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Sapcd2Q9D818 391 aa18.99■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Znf326O88291 580 aa18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Sfi1Q3UZY0 1216 aaKnown RBP18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Fndc3bQ6NWW9 1207 aaKnown RBP18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Slc45a1Q8BIV7 751 aa18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Ralgps2Q9ERD6 590 aa18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Dnajc2P54103 621 aaKnown RBP18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Grm1P97772 1199 aa18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Pdlim7Q3TJD7 457 aa18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Cnnm2Q3TWN3 875 aa18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Srgap1Q91Z69 1062 aa18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Traf7Q922B6 594 aa18.98■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Rexo5D3YW29 759 aa18.97■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Stx8O88983 236 aa18.97■□□□□ 0.63
Tpm1-215ENSMUST00000113705 TbcaP48428 108 aaKnown RBP18.97■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Fbxo28Q8BIG4 368 aa18.97■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Bco2Q99NF1 532 aa18.97■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Trim30dE9PWL0 497 aa18.96■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Flot1O08917 428 aa18.96■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Sap30bpQ02614 308 aa18.96■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Swap70Q6A028 585 aaKnown RBP18.96■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Slc4a8Q8JZR6 1089 aa18.96■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Pls1Q3V0K9 630 aa18.96■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Tmem47Q9JJG6 181 aa18.96■□□□□ 0.63
Tpm1-215ENSMUST00000113705 Gm42715A0A087WP63 3095 aaKnown RBP18.95■□□□□ 0.62
Tpm1-215ENSMUST00000113705 SafbD3YXK2 937 aaKnown RBP18.95■□□□□ 0.62
Tpm1-215ENSMUST00000113705 OgdhlE9Q7L0 1029 aa18.95■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Igfbp4P47879 254 aa18.95■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Tdrd3Q91W18 743 aaKnown RBP18.95■□□□□ 0.62
Tpm1-215ENSMUST00000113705 BaatQ91X34 420 aa18.95■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Katnbl1Q9CWJ3 299 aa18.95■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Irgm2A0A140LIF8 407 aa18.94■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Prr16A3KMN5 304 aa18.94■□□□□ 0.62
Tpm1-215ENSMUST00000113705 MyocO70624 490 aa18.94■□□□□ 0.62
Tpm1-215ENSMUST00000113705 RubcnlQ3TD16 648 aa18.94■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Ccdc158Q8CDI6 1109 aa18.94■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Pbx4Q99NE9 378 aa18.94■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Dock2Q8C3J5 1828 aa18.94■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Cyp2d34L7N463 504 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 CenpbP27790 599 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Rnf20Q5DTM8 973 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Kctd1Q5M956 257 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Siglec10Q80ZE3 688 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 IrgqQ8VIM9 583 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Pcdhb22Q91XZ8 794 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Atp11aP98197 1187 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Ppp4r2Q0VGB7 417 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Haus6Q6NV99 933 aaKnown RBP18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Slc44a1Q6X893 653 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Wdr43Q6ZQL4 677 aaKnown RBP18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Pus7lQ8CE46 702 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Ttc8Q8VD72 515 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Myh7bA2AQP0 1941 aa18.93■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Ms4a5Q810P8 197 aa18.92■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Adgra1Q8C4G9 578 aa18.92■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Ccdc178Q8CDV0 866 aa18.92■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Bst2Q8R2Q8 172 aa18.92■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Nop2Q922K7 793 aaKnown RBP18.92■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Odf2lQ9D478 642 aa18.92■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Tmod4Q9JLH8 345 aa18.92■□□□□ 0.62
Tpm1-215ENSMUST00000113705 Igsf9bE9PZ19 1328 aa18.92■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms