RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Hspd1P63038 573 aaKnown RBP10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pkp1P97350 728 aaKnown RBP10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Gtpbp10Q8K013 366 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Taf5lQ91WQ5 589 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Cst12Q9DAN8 128 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Clic4Q9QYB1 253 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 RpgrQ9R0X5 1001 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Syde2E9PUP1 1314 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 DohhA0A1Y7VJ29 135 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Stox1B2RQL2 990 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ctnna1P26231 906 aaKnown RBP10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Rad23aP54726 363 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 AdkP55264 361 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ctnna3Q65CL1 895 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Abcc2Q8VI47 1543 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Rsph10bE9PYQ0 876 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 HarsQ61035 509 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Yars2Q8BYL4 472 aaKnown RBP10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Tbx22Q8K402 517 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ncoa5Q91W39 579 aaKnown RBP10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 AticQ9CWJ9 592 aaKnown RBP10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Serpinb12Q9D7P9 423 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ncapd2Q8K2Z4 1392 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Gm20425E9Q035 978 aaKnown RBP10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 1700113H08RikE9Q9Q5 327 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 SrprbP47758 269 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Nub1P54729 614 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ttc27Q8CD92 847 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Slc26a7Q8R2Z3 656 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Tbc1d31Q6NXY1 996 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Dis3l2Q8CI75 870 aaKnown RBP10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Gimap7Q8R379 293 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pcdha12Q91Y18 950 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ribc1Q9D0B8 379 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Cep83Q9D5R3 692 aa10.87□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ugt1a5B2RT14 529 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Card6E9PWH2 1175 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Nlrp1aQ2LKU9 1182 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 PsdQ5DTT2 1024 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Mpp4Q6P7F1 635 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Atp2a1Q8R429 994 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Hps4Q99KG7 671 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Plcb1Q9Z1B3 1216 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Nphp4P59240 1425 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ppp2r5cQ60996 524 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 TrhQ62361 256 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Lzts2Q91YU6 671 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Kif2cQ922S8 721 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Saal1Q9D2C2 474 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Dennd4bQ3U1Y4 1499 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Nlrx1Q3TL44 975 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Krt9Q6RHW0 743 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Nup58Q8R332 587 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Actn2Q9JI91 894 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 PtprgQ05909 1442 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Xrcc6P23475 608 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Idi1P58044 227 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Esyt2Q3TZZ7 845 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 C130026I21RikQ8C898 291 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ddx24Q9ESV0 857 aaKnown RBP10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pard3Q99NH2 1333 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Zfp174B9EJW5 407 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pik3caP42337 1068 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Asic4Q7TNS7 539 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Crybg3Q80W49 1005 aa10.86□□□□□ -0.67
Syne1-201ENSMUST00000041639 Vwa3bJ9JI28 736 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Cep63Q3UPP8 700 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Bbs9Q811G0 885 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Caps2Q8BUG5 550 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Taf12Q8VE65 161 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ubn1Q4G0F8 1135 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Madcam1Q61826 405 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Stn1Q8K2X3 378 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Scyl1Q9EQC5 806 aaKnown RBP10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Serpinb1cQ5SV42 375 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Cadps2Q8BYR5 1297 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Stac3Q8BZ71 360 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ccdc7Q9D541 371 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Gm6121L7MUF1 212 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Ankrd13cQ3UX43 541 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Tgfb1i1Q62219 461 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Krt18P05784 423 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Gm5169Q5M8P2 212 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Rimbp2Q80U40 1072 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Gli2Q0VGT2 1544 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Gm16486A0A1D5RMD1 1434 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Chl1P70232 1209 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Eya3P97480 510 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Kctd6Q8BNL5 237 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Vps37bQ8R0J7 285 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Klhl40Q9D783 621 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Sept3Q9Z1S5 350 aa10.85□□□□□ -0.67
Syne1-201ENSMUST00000041639 Acot10Q32MW3 439 aa10.84□□□□□ -0.67
Syne1-201ENSMUST00000041639 Gm5168Q4KL04 211 aa10.84□□□□□ -0.67
Syne1-201ENSMUST00000041639 Retreg2Q6NS82 541 aa10.84□□□□□ -0.67
Syne1-201ENSMUST00000041639 Unc5clQ6R653 518 aa10.84□□□□□ -0.67
Syne1-201ENSMUST00000041639 Nxf7Q80SZ6 620 aaKnown RBP10.84□□□□□ -0.67
Syne1-201ENSMUST00000041639 Sh2b1Q91ZM2 756 aa10.84□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pold4Q9CWP8 107 aa10.84□□□□□ -0.67
Syne1-201ENSMUST00000041639 Pla2r1Q62028 1487 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms