RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Krtap4-1Q3UUY3 169 aa4.88□□□□□ -1.63
Ptpre-207ENSMUST00000211140 Hmcn2A2AJ76 5100 aa4.86□□□□□ -1.63
Ptpre-207ENSMUST00000211140 2300003K06RikA2A4M0 262 aa4.84□□□□□ -1.63
Ptpre-207ENSMUST00000211140 4932415D10RikA0A1W2P6U8 4986 aa4.81□□□□□ -1.64
Ptpre-207ENSMUST00000211140 Fat4Q2PZL6 4981 aa4.8□□□□□ -1.64
Ptpre-207ENSMUST00000211140 Abca13Q5SSE9 5034 aa4.79□□□□□ -1.64
Ptpre-207ENSMUST00000211140 Krtap4-7Q9D732 168 aa4.78□□□□□ -1.64
Ptpre-207ENSMUST00000211140 Gm11564A2A4L9 201 aa4.77□□□□□ -1.65
Ptpre-207ENSMUST00000211140 Gm11563B1AQ90 168 aa4.77□□□□□ -1.65
Ptpre-207ENSMUST00000211140 Gm11595B1AQA7 289 aa4.77□□□□□ -1.65
Ptpre-207ENSMUST00000211140 Krtap4-8B1AQA8 209 aa4.77□□□□□ -1.65
Ptpre-207ENSMUST00000211140 Krtap4-16Q91W93 202 aa4.77□□□□□ -1.65
Ptpre-207ENSMUST00000211140 Lce1kJ3QP15 125 aa4.77□□□□□ -1.65
Ptpre-207ENSMUST00000211140 ZanO88799 5376 aa4.76□□□□□ -1.65
Ptpre-207ENSMUST00000211140 Krtap4-9B1AQA9 244 aa4.75□□□□□ -1.65
Ptpre-207ENSMUST00000211140 Gm11596B1AQB0 205 aa4.75□□□□□ -1.65
Ptpre-207ENSMUST00000211140 Mt3P28184 68 aa4.7□□□□□ -1.66
Ptpre-207ENSMUST00000211140 Muc5bE9Q5I3 4800 aa4.68□□□□□ -1.66
Ptpre-207ENSMUST00000211140 Krtap4-13Q9D7P3 165 aa4.65□□□□□ -1.67
Ptpre-207ENSMUST00000211140 A0A1Y7VLE6 161 aa4.64□□□□□ -1.67
Ptpre-207ENSMUST00000211140 Rnf213E9Q555 5152 aaKnown RBP4.54□□□□□ -1.68
Ptpre-207ENSMUST00000211140 Fsip2A2ARZ3 6995 aa4.46□□□□□ -1.7
Ptpre-207ENSMUST00000211140 Lce1a1Q9CQH5 143 aa4.43□□□□□ -1.7
Ptpre-207ENSMUST00000211140 Mt1P02802 61 aaKnown RBP4.36□□□□□ -1.71
Ptpre-207ENSMUST00000211140 Ush2AQ2QI47 5193 aa4.35□□□□□ -1.71
Ptpre-207ENSMUST00000211140 Syne2Q6ZWQ0 6874 aaKnown RBP4.34□□□□□ -1.71
Ptpre-207ENSMUST00000211140 SspoQ8CG65 4998 aa4.27□□□□□ -1.73
Ptpre-207ENSMUST00000211140 Sprr2bO70554 98 aa4.26□□□□□ -1.73
Ptpre-207ENSMUST00000211140 A0A1Y7VJH8 109 aa4.23□□□□□ -1.73
Ptpre-207ENSMUST00000211140 Gm11554B1AQB2 190 aa4.21□□□□□ -1.74
Ptpre-207ENSMUST00000211140 A030003K21RikA0A1Y7VIM3 128 aa4.19□□□□□ -1.74
Ptpre-207ENSMUST00000211140 Krtap28-10A0A1Y7VP58 119 aa4.19□□□□□ -1.74
Ptpre-207ENSMUST00000211140 Krtap6-3A0A087WQL6 57 aa4.18□□□□□ -1.74
Ptpre-207ENSMUST00000211140 Krtap31-2Q8CAY5 177 aa4.17□□□□□ -1.74
Ptpre-207ENSMUST00000211140 Muc16A0A140LJ72 8478 aa4.14□□□□□ -1.75
Ptpre-207ENSMUST00000211140 ObscnA2AAJ9 8891 aaKnown RBP4.09□□□□□ -1.75
Ptpre-207ENSMUST00000211140 Krtap20-2E9Q0A8 60 aa4.06□□□□□ -1.76
Ptpre-207ENSMUST00000211140 Krtap28-13A0A087WQP5 138 aa4.01□□□□□ -1.77
Ptpre-207ENSMUST00000211140 Gm6217A0A1Y7VJK9 128 aa3.94□□□□□ -1.78
Ptpre-207ENSMUST00000211140 A030005K14RikA0A1Y7VNY1 122 aa3.92□□□□□ -1.78
Ptpre-207ENSMUST00000211140 A030005L19RikA0A1Y7VIU2 113 aa3.88□□□□□ -1.79
Ptpre-207ENSMUST00000211140 Gm7544A0A1Y7VJ58 118 aa3.87□□□□□ -1.79
Ptpre-207ENSMUST00000211140 A0A1Y7VJ07 166 aa3.84□□□□□ -1.79
Ptpre-207ENSMUST00000211140 Kmt2dQ6PDK2 5588 aa3.63□□□□□ -1.83
Ptpre-207ENSMUST00000211140 1110025L11RikO09048 78 aa3.59□□□□□ -1.83
Ptpre-207ENSMUST00000211140 Krtap6-5Q925H3 78 aa3.59□□□□□ -1.83
Ptpre-207ENSMUST00000211140 DstQ91ZU6 7393 aaKnown RBP3.57□□□□□ -1.84
Ptpre-207ENSMUST00000211140 A030014E15RikA0A1Y7VJV2 120 aa3.55□□□□□ -1.84
Ptpre-207ENSMUST00000211140 Macf1Q9QXZ0 7354 aaKnown RBP3.54□□□□□ -1.84
Ptpre-207ENSMUST00000211140 Eppk1Q8R0W0 6548 aa3.52□□□□□ -1.85
Ptpre-207ENSMUST00000211140 NebE9Q1W3 7152 aa3.46□□□□□ -1.85
Ptpre-207ENSMUST00000211140 Gm11555B1AQ89 175 aa3.45□□□□□ -1.86
Ptpre-207ENSMUST00000211140 Gm10229O08631 77 aa3.41□□□□□ -1.86
Ptpre-207ENSMUST00000211140 Phgr1Q8K0G7 91 aa3.3□□□□□ -1.88
Ptpre-207ENSMUST00000211140 Muc19Q6PZE0 7524 aa3.26□□□□□ -1.89
Ptpre-207ENSMUST00000211140 Gm11568A2A4M2 211 aa3.21□□□□□ -1.9
Ptpre-207ENSMUST00000211140 Krtap9-1Q64526 186 aa3.21□□□□□ -1.9
Ptpre-207ENSMUST00000211140 Gm11559Q9D3H7 191 aa3.16□□□□□ -1.9
Ptpre-207ENSMUST00000211140 Gm11639A0A1D5RLM8 5808 aa2.97□□□□□ -1.93
Ptpre-207ENSMUST00000211140 A0A286YCP9 139 aa2.79□□□□□ -1.96
Ptpre-207ENSMUST00000211140 Krtap5-2Q9D5Z7 189 aa2.75□□□□□ -1.97
Ptpre-207ENSMUST00000211140 Gpr98Q8VHN7 6298 aaKnown RBP2.73□□□□□ -1.97
Ptpre-207ENSMUST00000211140 Krtap6-2O08884 159 aa2.7□□□□□ -1.98
Ptpre-207ENSMUST00000211140 Hmcn1D3YXG0 5634 aa2.66□□□□□ -1.98
Ptpre-207ENSMUST00000211140 Gm4553A0A1B0GSA9 284 aa2.55□□□□□ -2
Ptpre-207ENSMUST00000211140 Gm11567Q9D141 195 aa2.54□□□□□ -2
Ptpre-207ENSMUST00000211140 Krtap21-1Q925H4 128 aa2.52□□□□□ -2.01
Ptpre-207ENSMUST00000211140 Gm2431E9Q8S1 172 aa2.41□□□□□ -2.02
Ptpre-207ENSMUST00000211140 AhnakE9Q616 5656 aaKnown RBP2.38□□□□□ -2.03
Ptpre-207ENSMUST00000211140 Gm10153A0A1B0GRL1 320 aa2.35□□□□□ -2.03
Ptpre-207ENSMUST00000211140 Gm45337A0A1B0GS71 263 aa2.16□□□□□ -2.06
Ptpre-207ENSMUST00000211140 Gm40460A0A1B0GR10 244 aa2.15□□□□□ -2.07
Ptpre-207ENSMUST00000211140 Gm7579A0A1B0GRJ4 243 aa2.15□□□□□ -2.07
Ptpre-207ENSMUST00000211140 Krtap5-5Q2TA51 241 aa2.15□□□□□ -2.07
Ptpre-207ENSMUST00000211140 Krtap5-4Q62220 223 aa2.15□□□□□ -2.07
Ptpre-207ENSMUST00000211140 Gm39115A0A1B0GSH7 232 aa1.94□□□□□ -2.1
Ptpre-207ENSMUST00000211140 Gm45618A0A1B0GSA0 219 aa1.85□□□□□ -2.11
Ptpre-207ENSMUST00000211140 Gm29735A0A1B0GT06 219 aa1.64□□□□□ -2.15
Ptpre-207ENSMUST00000211140 Krtap5-1Q64507 230 aa1.35□□□□□ -2.19
Ptpre-207ENSMUST00000211140 Gm4559A4IF42 199 aa1.1□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 204.1 ms