RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Sprr2kO70562 68 aa4.28□□□□□ -1.72
Pdlim5-209ENSMUST00000196908 Krtap19-2Q925I0 141 aa4.28□□□□□ -1.72
Pdlim5-209ENSMUST00000196908 Gm9955Q8CEJ8 102 aa4.26□□□□□ -1.73
Pdlim5-209ENSMUST00000196908 Gm17606F6ZL36 78 aa4.25□□□□□ -1.73
Pdlim5-209ENSMUST00000196908 Gm20537G3UYK7 97 aa4.22□□□□□ -1.73
Pdlim5-209ENSMUST00000196908 Gm6358A0A087WPH4 74 aa4.17□□□□□ -1.74
Pdlim5-209ENSMUST00000196908 Gm11568A2A4M2 211 aa4.15□□□□□ -1.75
Pdlim5-209ENSMUST00000196908 Gm10382Q3V0T5 144 aa4.15□□□□□ -1.75
Pdlim5-209ENSMUST00000196908 Krtap9-1Q64526 186 aa4.13□□□□□ -1.75
Pdlim5-209ENSMUST00000196908 Gm3880A0A1B0GSB3 72 aa4.1□□□□□ -1.75
Pdlim5-209ENSMUST00000196908 Krtap20-2E9Q0A8 60 aa4.07□□□□□ -1.76
Pdlim5-209ENSMUST00000196908 Gm4553A0A1B0GSA9 284 aa4.05□□□□□ -1.76
Pdlim5-209ENSMUST00000196908 Krtap13-1Q8K198 168 aa4.05□□□□□ -1.76
Pdlim5-209ENSMUST00000196908 Gm12216A0A1W2P827 62 aa4.04□□□□□ -1.76
Pdlim5-209ENSMUST00000196908 Romo1P60603 79 aa4.03□□□□□ -1.76
Pdlim5-209ENSMUST00000196908 BC029722A0A0N4SW31 51 aa4.01□□□□□ -1.77
Pdlim5-209ENSMUST00000196908 Gm17402F6Z0L5 76 aa4.01□□□□□ -1.77
Pdlim5-209ENSMUST00000196908 Sprr2gO70558 76 aa4.01□□□□□ -1.77
Pdlim5-209ENSMUST00000196908 Eppk1Q8R0W0 6548 aa3.99□□□□□ -1.77
Pdlim5-209ENSMUST00000196908 Gm7579A0A1B0GRJ4 243 aa3.96□□□□□ -1.78
Pdlim5-209ENSMUST00000196908 2310046K23RikA0A0A6YVW6 87 aa3.95□□□□□ -1.78
Pdlim5-209ENSMUST00000196908 Krtap5-1Q64507 230 aa3.94□□□□□ -1.78
Pdlim5-209ENSMUST00000196908 Gm19426M0QWC7 77 aa3.9□□□□□ -1.79
Pdlim5-209ENSMUST00000196908 Krtap8-1O08633 61 aa3.9□□□□□ -1.79
Pdlim5-209ENSMUST00000196908 Krtap5-2Q9D5Z7 189 aa3.89□□□□□ -1.79
Pdlim5-209ENSMUST00000196908 Krtap19-9aF8WH65 55 aa3.82□□□□□ -1.8
Pdlim5-209ENSMUST00000196908 Mt2P02798 61 aa3.82□□□□□ -1.8
Pdlim5-209ENSMUST00000196908 CriptO70333 101 aa3.81□□□□□ -1.8
Pdlim5-209ENSMUST00000196908 Gm11639A0A1D5RLM8 5808 aa3.81□□□□□ -1.8
Pdlim5-209ENSMUST00000196908 Sprr2a3Q4KL71 83 aa3.79□□□□□ -1.8
Pdlim5-209ENSMUST00000196908 Sprr2a1Q9CQK8 83 aa3.79□□□□□ -1.8
Pdlim5-209ENSMUST00000196908 Gm40193A0A1B0GT39 78 aa3.78□□□□□ -1.8
Pdlim5-209ENSMUST00000196908 Gm4559A4IF42 199 aa3.74□□□□□ -1.81
Pdlim5-209ENSMUST00000196908 Gm20538F6Z9R1 75 aa3.71□□□□□ -1.82
Pdlim5-209ENSMUST00000196908 Mp68P56379 58 aa3.71□□□□□ -1.82
Pdlim5-209ENSMUST00000196908 Spink7Q6IE32 76 aa3.71□□□□□ -1.82
Pdlim5-209ENSMUST00000196908 Gpr98Q8VHN7 6298 aaKnown RBP3.7□□□□□ -1.82
Pdlim5-209ENSMUST00000196908 Macf1Q9QXZ0 7354 aaKnown RBP3.68□□□□□ -1.82
Pdlim5-209ENSMUST00000196908 Krtap22-2J3QNX6 67 aa3.66□□□□□ -1.82
Pdlim5-209ENSMUST00000196908 Krtap7-1Q9D3I6 87 aa3.66□□□□□ -1.82
Pdlim5-209ENSMUST00000196908 Camk2n1Q6QWF9 78 aa3.59□□□□□ -1.83
Pdlim5-209ENSMUST00000196908 Kmt2dQ6PDK2 5588 aa3.56□□□□□ -1.84
Pdlim5-209ENSMUST00000196908 Muc19Q6PZE0 7524 aa3.54□□□□□ -1.84
Pdlim5-209ENSMUST00000196908 Tnp1P10856 55 aa3.43□□□□□ -1.86
Pdlim5-209ENSMUST00000196908 Sprr2iO70560 76 aa3.42□□□□□ -1.86
Pdlim5-209ENSMUST00000196908 Ndufaf8A2AMZ4 74 aa3.41□□□□□ -1.86
Pdlim5-209ENSMUST00000196908 Lce3dE9Q8V1 98 aa3.34□□□□□ -1.87
Pdlim5-209ENSMUST00000196908 Lce3aQ497I5 98 aa3.34□□□□□ -1.87
Pdlim5-209ENSMUST00000196908 Krtap19-9bQ99NG9 58 aa3.31□□□□□ -1.88
Pdlim5-209ENSMUST00000196908 DstQ91ZU6 7393 aaKnown RBP3.29□□□□□ -1.88
Pdlim5-209ENSMUST00000196908 NebE9Q1W3 7152 aa3.26□□□□□ -1.89
Pdlim5-209ENSMUST00000196908 Krtap4-16Q91W93 202 aa3.22□□□□□ -1.89
Pdlim5-209ENSMUST00000196908 Hmcn1D3YXG0 5634 aa3.2□□□□□ -1.9
Pdlim5-209ENSMUST00000196908 Krtap5-5Q2TA51 241 aa3.14□□□□□ -1.91
Pdlim5-209ENSMUST00000196908 Syne1Q6ZWR6 8799 aa3.11□□□□□ -1.91
Pdlim5-209ENSMUST00000196908 Lce3bQ9CQM7 98 aa3.08□□□□□ -1.92
Pdlim5-209ENSMUST00000196908 Gm9112A2AI92 75 aa3.07□□□□□ -1.92
Pdlim5-209ENSMUST00000196908 Sprr2fO70557 76 aa3.06□□□□□ -1.92
Pdlim5-209ENSMUST00000196908 Krtap19-4Q925H7 84 aa3.06□□□□□ -1.92
Pdlim5-209ENSMUST00000196908 Gm40460A0A1B0GR10 244 aa3.05□□□□□ -1.92
Pdlim5-209ENSMUST00000196908 Lce3fQ6PAI4 98 aa3.01□□□□□ -1.93
Pdlim5-209ENSMUST00000196908 Lce3cQ91V05 98 aa3.01□□□□□ -1.93
Pdlim5-209ENSMUST00000196908 AhnakE9Q616 5656 aaKnown RBP2.99□□□□□ -1.93
Pdlim5-209ENSMUST00000196908 Krtap6-5Q925H3 78 aa2.98□□□□□ -1.93
Pdlim5-209ENSMUST00000196908 4933428G20RikQ9D3X4 101 aa2.89□□□□□ -1.95
Pdlim5-209ENSMUST00000196908 Sprr2dO70555 85 aa2.87□□□□□ -1.95
Pdlim5-209ENSMUST00000196908 Gm10229O08631 77 aa2.85□□□□□ -1.95
Pdlim5-209ENSMUST00000196908 Gm11938Q9D3H4 131 aa2.84□□□□□ -1.95
Pdlim5-209ENSMUST00000196908 Mt1P02802 61 aaKnown RBP2.82□□□□□ -1.96
Pdlim5-209ENSMUST00000196908 Lce3eF8VQJ0 98 aa2.52□□□□□ -2.01
Pdlim5-209ENSMUST00000196908 Sprr2hO70559 108 aa2.47□□□□□ -2.01
Pdlim5-209ENSMUST00000196908 Krtap6-2O08884 159 aa2.45□□□□□ -2.02
Pdlim5-209ENSMUST00000196908 Sprr2eO70556 76 aa2.45□□□□□ -2.02
Pdlim5-209ENSMUST00000196908 ObscnA2AAJ9 8891 aaKnown RBP2.43□□□□□ -2.02
Pdlim5-209ENSMUST00000196908 Muc16A0A140LJ72 8478 aa2.27□□□□□ -2.05
Pdlim5-209ENSMUST00000196908 Gm10024A0A0A0MQA4 119 aa2.2□□□□□ -2.06
Pdlim5-209ENSMUST00000196908 Krtap21-1Q925H4 128 aa1.92□□□□□ -2.1
Pdlim5-209ENSMUST00000196908 1110025L11RikO09048 78 aa1.9□□□□□ -2.11
Pdlim5-209ENSMUST00000196908 Sprr2bO70554 98 aa1.89□□□□□ -2.11
Pdlim5-209ENSMUST00000196908 Phgr1Q8K0G7 91 aa1.45□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 128 ms