RNA–Protein interactions for RNA: ENSMUST00000170361.8

Pdlim5-205, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 5 BASIC

Gene Pdlim5, Length 2,010 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-205ENSMUST00000170361 Krtap19-1Q925H2 87 aa3.12□□□□□ -1.91
Pdlim5-205ENSMUST00000170361 Gm17402F6Z0L5 76 aa3.11□□□□□ -1.91
Pdlim5-205ENSMUST00000170361 4932415D10RikA0A1W2P6U8 4986 aa3.09□□□□□ -1.91
Pdlim5-205ENSMUST00000170361 Gm10272F7CZ33 110 aa3.07□□□□□ -1.92
Pdlim5-205ENSMUST00000170361 ZanO88799 5376 aa3.05□□□□□ -1.92
Pdlim5-205ENSMUST00000170361 Ubr4A2AN08 5180 aa3.05□□□□□ -1.92
Pdlim5-205ENSMUST00000170361 Rnf213E9Q555 5152 aaKnown RBP3.01□□□□□ -1.93
Pdlim5-205ENSMUST00000170361 Spink7Q6IE32 76 aa3.01□□□□□ -1.93
Pdlim5-205ENSMUST00000170361 2310046K23RikA0A0A6YVW6 87 aa2.98□□□□□ -1.93
Pdlim5-205ENSMUST00000170361 Fat4Q2PZL6 4981 aa2.97□□□□□ -1.93
Pdlim5-205ENSMUST00000170361 Hmcn1D3YXG0 5634 aa2.96□□□□□ -1.93
Pdlim5-205ENSMUST00000170361 Gm11596B1AQB0 205 aa2.95□□□□□ -1.94
Pdlim5-205ENSMUST00000170361 Sprr2iO70560 76 aa2.95□□□□□ -1.94
Pdlim5-205ENSMUST00000170361 2300003K06RikA2A4M0 262 aa2.95□□□□□ -1.94
Pdlim5-205ENSMUST00000170361 Krtap5-5Q2TA51 241 aa2.93□□□□□ -1.94
Pdlim5-205ENSMUST00000170361 SspoQ8CG65 4998 aa2.9□□□□□ -1.95
Pdlim5-205ENSMUST00000170361 Lce1a2Q9D1K4 149 aa2.9□□□□□ -1.95
Pdlim5-205ENSMUST00000170361 Lce1iQ9D6P5 149 aa2.9□□□□□ -1.95
Pdlim5-205ENSMUST00000170361 Gm10061D3Z714 54 aa2.88□□□□□ -1.95
Pdlim5-205ENSMUST00000170361 Krtap12-1Q9Z287 130 aa2.88□□□□□ -1.95
Pdlim5-205ENSMUST00000170361 Gm10142J3KMP7 120 aa2.86□□□□□ -1.95
Pdlim5-205ENSMUST00000170361 Krtap19-9aF8WH65 55 aa2.86□□□□□ -1.95
Pdlim5-205ENSMUST00000170361 Gm11568A2A4M2 211 aa2.81□□□□□ -1.96
Pdlim5-205ENSMUST00000170361 Krtap9-1Q64526 186 aa2.81□□□□□ -1.96
Pdlim5-205ENSMUST00000170361 Gm10024A0A0A0MQA4 119 aa2.78□□□□□ -1.96
Pdlim5-205ENSMUST00000170361 Krtap5-2Q9D5Z7 189 aa2.78□□□□□ -1.96
Pdlim5-205ENSMUST00000170361 Krtap19-2Q925I0 141 aa2.77□□□□□ -1.97
Pdlim5-205ENSMUST00000170361 Krtap4-8B1AQA8 209 aa2.76□□□□□ -1.97
Pdlim5-205ENSMUST00000170361 Sprr2fO70557 76 aa2.76□□□□□ -1.97
Pdlim5-205ENSMUST00000170361 Gm40460A0A1B0GR10 244 aa2.71□□□□□ -1.98
Pdlim5-205ENSMUST00000170361 Muc5bE9Q5I3 4800 aa2.68□□□□□ -1.98
Pdlim5-205ENSMUST00000170361 Gpr98Q8VHN7 6298 aaKnown RBP2.64□□□□□ -1.99
Pdlim5-205ENSMUST00000170361 Krtap8-1O08633 61 aa2.64□□□□□ -1.99
Pdlim5-205ENSMUST00000170361 Krtap19-9bQ99NG9 58 aa2.62□□□□□ -1.99
Pdlim5-205ENSMUST00000170361 Gm6358A0A087WPH4 74 aa2.61□□□□□ -1.99
Pdlim5-205ENSMUST00000170361 Gm7579A0A1B0GRJ4 243 aa2.6□□□□□ -1.99
Pdlim5-205ENSMUST00000170361 Krtap9-3Q3V2C1 136 aa2.59□□□□□ -2
Pdlim5-205ENSMUST00000170361 Mt2P02798 61 aa2.57□□□□□ -2
Pdlim5-205ENSMUST00000170361 Mt3P28184 68 aa2.57□□□□□ -2
Pdlim5-205ENSMUST00000170361 Sprr2gO70558 76 aa2.56□□□□□ -2
Pdlim5-205ENSMUST00000170361 Gm11938Q9D3H4 131 aa2.52□□□□□ -2.01
Pdlim5-205ENSMUST00000170361 Sprr2kO70562 68 aa2.49□□□□□ -2.01
Pdlim5-205ENSMUST00000170361 Sprr2eO70556 76 aa2.46□□□□□ -2.02
Pdlim5-205ENSMUST00000170361 Krtap22-2J3QNX6 67 aa2.45□□□□□ -2.02
Pdlim5-205ENSMUST00000170361 Krtap19-4Q925H7 84 aa2.44□□□□□ -2.02
Pdlim5-205ENSMUST00000170361 Mdn1A2ANY6 5589 aaKnown RBP2.43□□□□□ -2.02
Pdlim5-205ENSMUST00000170361 Syne2Q6ZWQ0 6874 aaKnown RBP2.42□□□□□ -2.02
Pdlim5-205ENSMUST00000170361 Sprr2dO70555 85 aa2.4□□□□□ -2.03
Pdlim5-205ENSMUST00000170361 Gm11564A2A4L9 201 aa2.37□□□□□ -2.03
Pdlim5-205ENSMUST00000170361 Eppk1Q8R0W0 6548 aa2.3□□□□□ -2.04
Pdlim5-205ENSMUST00000170361 Mt4P47945 62 aa2.27□□□□□ -2.05
Pdlim5-205ENSMUST00000170361 Krtap6-3A0A087WQL6 57 aa2.25□□□□□ -2.05
Pdlim5-205ENSMUST00000170361 Krtap4-16Q91W93 202 aa2.24□□□□□ -2.05
Pdlim5-205ENSMUST00000170361 Sprr2hO70559 108 aa2.22□□□□□ -2.05
Pdlim5-205ENSMUST00000170361 Fsip2A2ARZ3 6995 aa2.21□□□□□ -2.06
Pdlim5-205ENSMUST00000170361 Syne1Q6ZWR6 8799 aa2.14□□□□□ -2.07
Pdlim5-205ENSMUST00000170361 Lce3bQ9CQM7 98 aa2.13□□□□□ -2.07
Pdlim5-205ENSMUST00000170361 Kmt2dQ6PDK2 5588 aa2.12□□□□□ -2.07
Pdlim5-205ENSMUST00000170361 Krtap20-2E9Q0A8 60 aa2.09□□□□□ -2.07
Pdlim5-205ENSMUST00000170361 Lce3eF8VQJ0 98 aa2.05□□□□□ -2.08
Pdlim5-205ENSMUST00000170361 Lce3fQ6PAI4 98 aa2.05□□□□□ -2.08
Pdlim5-205ENSMUST00000170361 Lce3dE9Q8V1 98 aa2.03□□□□□ -2.08
Pdlim5-205ENSMUST00000170361 Lce3aQ497I5 98 aa2.03□□□□□ -2.08
Pdlim5-205ENSMUST00000170361 Lce3cQ91V05 98 aa2.01□□□□□ -2.09
Pdlim5-205ENSMUST00000170361 DstQ91ZU6 7393 aaKnown RBP2.01□□□□□ -2.09
Pdlim5-205ENSMUST00000170361 Mt1P02802 61 aaKnown RBP1.95□□□□□ -2.1
Pdlim5-205ENSMUST00000170361 ObscnA2AAJ9 8891 aaKnown RBP1.9□□□□□ -2.11
Pdlim5-205ENSMUST00000170361 Macf1Q9QXZ0 7354 aaKnown RBP1.8□□□□□ -2.12
Pdlim5-205ENSMUST00000170361 Gm11639A0A1D5RLM8 5808 aa1.71□□□□□ -2.14
Pdlim5-205ENSMUST00000170361 Krtap6-5Q925H3 78 aa1.64□□□□□ -2.15
Pdlim5-205ENSMUST00000170361 Gm10229O08631 77 aa1.59□□□□□ -2.16
Pdlim5-205ENSMUST00000170361 Muc19Q6PZE0 7524 aa1.54□□□□□ -2.16
Pdlim5-205ENSMUST00000170361 AhnakE9Q616 5656 aaKnown RBP1.53□□□□□ -2.16
Pdlim5-205ENSMUST00000170361 Muc16A0A140LJ72 8478 aa1.53□□□□□ -2.16
Pdlim5-205ENSMUST00000170361 Sprr2bO70554 98 aa1.49□□□□□ -2.17
Pdlim5-205ENSMUST00000170361 1110025L11RikO09048 78 aa1.47□□□□□ -2.17
Pdlim5-205ENSMUST00000170361 NebE9Q1W3 7152 aa1.41□□□□□ -2.18
Pdlim5-205ENSMUST00000170361 Phgr1Q8K0G7 91 aa1.3□□□□□ -2.2
Pdlim5-205ENSMUST00000170361 Krtap6-2O08884 159 aa1.3□□□□□ -2.2
Pdlim5-205ENSMUST00000170361 Krtap21-1Q925H4 128 aa1.2□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 62.4 ms