RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Gm11562A0PK51 136 aa4.43□□□□□ -1.7
Pdlim5-204ENSMUST00000168967 Tnp1P10856 55 aa4.43□□□□□ -1.7
Pdlim5-204ENSMUST00000168967 Krtap9-1Q64526 186 aa4.43□□□□□ -1.7
Pdlim5-204ENSMUST00000168967 Krtap9-3Q3V2C1 136 aa4.42□□□□□ -1.7
Pdlim5-204ENSMUST00000168967 Krtap16-3Q8C1I6 86 aa4.41□□□□□ -1.7
Pdlim5-204ENSMUST00000168967 Krtap1-4Q3V2D6 188 aa4.38□□□□□ -1.71
Pdlim5-204ENSMUST00000168967 Crct1Q6PAI5 102 aa4.37□□□□□ -1.71
Pdlim5-204ENSMUST00000168967 Gm10318A0A1W2P728 225 aa4.35□□□□□ -1.71
Pdlim5-204ENSMUST00000168967 Krtap19-1Q925H2 87 aa4.35□□□□□ -1.71
Pdlim5-204ENSMUST00000168967 ZanO88799 5376 aa4.34□□□□□ -1.71
Pdlim5-204ENSMUST00000168967 Krtap5-1Q64507 230 aa4.32□□□□□ -1.72
Pdlim5-204ENSMUST00000168967 Krtap19-3Q925H6 87 aa4.29□□□□□ -1.72
Pdlim5-204ENSMUST00000168967 Fat4Q2PZL6 4981 aa4.28□□□□□ -1.72
Pdlim5-204ENSMUST00000168967 Krtap4-6Q3V4B7 195 aa4.27□□□□□ -1.73
Pdlim5-204ENSMUST00000168967 Rnf213E9Q555 5152 aaKnown RBP4.24□□□□□ -1.73
Pdlim5-204ENSMUST00000168967 2310046K23RikA0A0A6YVW6 87 aa4.21□□□□□ -1.74
Pdlim5-204ENSMUST00000168967 Gm4559A4IF42 199 aa4.2□□□□□ -1.74
Pdlim5-204ENSMUST00000168967 Gm4553A0A1B0GSA9 284 aa4.17□□□□□ -1.74
Pdlim5-204ENSMUST00000168967 Krtap19-9aF8WH65 55 aa4.17□□□□□ -1.74
Pdlim5-204ENSMUST00000168967 Gm10061D3Z714 54 aa4.14□□□□□ -1.75
Pdlim5-204ENSMUST00000168967 Krtap8-1O08633 61 aa4.14□□□□□ -1.75
Pdlim5-204ENSMUST00000168967 Gm11568A2A4M2 211 aa4.1□□□□□ -1.75
Pdlim5-204ENSMUST00000168967 Krtap19-9bQ99NG9 58 aa4.04□□□□□ -1.76
Pdlim5-204ENSMUST00000168967 SspoQ8CG65 4998 aa4.04□□□□□ -1.76
Pdlim5-204ENSMUST00000168967 Gm11596B1AQB0 205 aa3.94□□□□□ -1.78
Pdlim5-204ENSMUST00000168967 Syne2Q6ZWQ0 6874 aaKnown RBP3.94□□□□□ -1.78
Pdlim5-204ENSMUST00000168967 Krtap5-5Q2TA51 241 aa3.81□□□□□ -1.8
Pdlim5-204ENSMUST00000168967 4933428G20RikQ9D3X4 101 aa3.79□□□□□ -1.8
Pdlim5-204ENSMUST00000168967 Krtap19-2Q925I0 141 aa3.77□□□□□ -1.81
Pdlim5-204ENSMUST00000168967 Lce3dE9Q8V1 98 aa3.76□□□□□ -1.81
Pdlim5-204ENSMUST00000168967 Lce3aQ497I5 98 aa3.76□□□□□ -1.81
Pdlim5-204ENSMUST00000168967 Muc5bE9Q5I3 4800 aa3.74□□□□□ -1.81
Pdlim5-204ENSMUST00000168967 Sprr2gO70558 76 aa3.73□□□□□ -1.81
Pdlim5-204ENSMUST00000168967 Hmcn1D3YXG0 5634 aa3.7□□□□□ -1.82
Pdlim5-204ENSMUST00000168967 Krtap5-2Q9D5Z7 189 aa3.69□□□□□ -1.82
Pdlim5-204ENSMUST00000168967 Mdn1A2ANY6 5589 aaKnown RBP3.66□□□□□ -1.82
Pdlim5-204ENSMUST00000168967 Sprr2dO70555 85 aa3.66□□□□□ -1.82
Pdlim5-204ENSMUST00000168967 Gm11564A2A4L9 201 aa3.61□□□□□ -1.83
Pdlim5-204ENSMUST00000168967 Gm11938Q9D3H4 131 aa3.61□□□□□ -1.83
Pdlim5-204ENSMUST00000168967 Gm6358A0A087WPH4 74 aa3.6□□□□□ -1.83
Pdlim5-204ENSMUST00000168967 Mt2P02798 61 aa3.56□□□□□ -1.84
Pdlim5-204ENSMUST00000168967 Gm7579A0A1B0GRJ4 243 aa3.56□□□□□ -1.84
Pdlim5-204ENSMUST00000168967 Gm40460A0A1B0GR10 244 aa3.51□□□□□ -1.85
Pdlim5-204ENSMUST00000168967 Mt4P47945 62 aa3.44□□□□□ -1.86
Pdlim5-204ENSMUST00000168967 Lce3fQ6PAI4 98 aa3.4□□□□□ -1.86
Pdlim5-204ENSMUST00000168967 Lce3cQ91V05 98 aa3.4□□□□□ -1.86
Pdlim5-204ENSMUST00000168967 Krtap6-3A0A087WQL6 57 aa3.39□□□□□ -1.87
Pdlim5-204ENSMUST00000168967 Krtap19-4Q925H7 84 aa3.38□□□□□ -1.87
Pdlim5-204ENSMUST00000168967 Fsip2A2ARZ3 6995 aa3.38□□□□□ -1.87
Pdlim5-204ENSMUST00000168967 Krtap22-2J3QNX6 67 aa3.36□□□□□ -1.87
Pdlim5-204ENSMUST00000168967 Sprr2iO70560 76 aa3.35□□□□□ -1.87
Pdlim5-204ENSMUST00000168967 Gm10229O08631 77 aa3.29□□□□□ -1.88
Pdlim5-204ENSMUST00000168967 Sprr2kO70562 68 aa3.28□□□□□ -1.89
Pdlim5-204ENSMUST00000168967 Lce3bQ9CQM7 98 aa3.25□□□□□ -1.89
Pdlim5-204ENSMUST00000168967 Sprr2eO70556 76 aa3.21□□□□□ -1.9
Pdlim5-204ENSMUST00000168967 Sprr2fO70557 76 aa3.18□□□□□ -1.9
Pdlim5-204ENSMUST00000168967 Sprr2hO70559 108 aa3.17□□□□□ -1.9
Pdlim5-204ENSMUST00000168967 Krtap20-2E9Q0A8 60 aa3.12□□□□□ -1.91
Pdlim5-204ENSMUST00000168967 Lce3eF8VQJ0 98 aa3.08□□□□□ -1.92
Pdlim5-204ENSMUST00000168967 Eppk1Q8R0W0 6548 aa3□□□□□ -1.93
Pdlim5-204ENSMUST00000168967 Syne1Q6ZWR6 8799 aa2.88□□□□□ -1.95
Pdlim5-204ENSMUST00000168967 Kmt2dQ6PDK2 5588 aa2.87□□□□□ -1.95
Pdlim5-204ENSMUST00000168967 Krtap6-5Q925H3 78 aa2.86□□□□□ -1.95
Pdlim5-204ENSMUST00000168967 ObscnA2AAJ9 8891 aaKnown RBP2.78□□□□□ -1.96
Pdlim5-204ENSMUST00000168967 Gm11639A0A1D5RLM8 5808 aa2.78□□□□□ -1.97
Pdlim5-204ENSMUST00000168967 Krtap4-16Q91W93 202 aa2.77□□□□□ -1.97
Pdlim5-204ENSMUST00000168967 Mt1P02802 61 aaKnown RBP2.75□□□□□ -1.97
Pdlim5-204ENSMUST00000168967 Gpr98Q8VHN7 6298 aaKnown RBP2.72□□□□□ -1.97
Pdlim5-204ENSMUST00000168967 Macf1Q9QXZ0 7354 aaKnown RBP2.69□□□□□ -1.98
Pdlim5-204ENSMUST00000168967 Gm10024A0A0A0MQA4 119 aa2.62□□□□□ -1.99
Pdlim5-204ENSMUST00000168967 Muc19Q6PZE0 7524 aa2.6□□□□□ -1.99
Pdlim5-204ENSMUST00000168967 Krtap6-2O08884 159 aa2.41□□□□□ -2.02
Pdlim5-204ENSMUST00000168967 NebE9Q1W3 7152 aa2.4□□□□□ -2.03
Pdlim5-204ENSMUST00000168967 DstQ91ZU6 7393 aaKnown RBP2.4□□□□□ -2.03
Pdlim5-204ENSMUST00000168967 Krtap21-1Q925H4 128 aa2.28□□□□□ -2.04
Pdlim5-204ENSMUST00000168967 1110025L11RikO09048 78 aa2.27□□□□□ -2.05
Pdlim5-204ENSMUST00000168967 AhnakE9Q616 5656 aaKnown RBP2.26□□□□□ -2.05
Pdlim5-204ENSMUST00000168967 Sprr2bO70554 98 aa2.22□□□□□ -2.05
Pdlim5-204ENSMUST00000168967 Muc16A0A140LJ72 8478 aa1.97□□□□□ -2.09
Pdlim5-204ENSMUST00000168967 Phgr1Q8K0G7 91 aa1.85□□□□□ -2.11
Retrieved 80 of 22,080 RNA–protein pairs in 80 ms