RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Gm11562A0PK51 136 aa4.92□□□□□ -1.62
Shroom3-204ENSMUST00000168878 Hmcn2A2AJ76 5100 aa4.89□□□□□ -1.63
Shroom3-204ENSMUST00000168878 Fat4Q2PZL6 4981 aa4.88□□□□□ -1.63
Shroom3-204ENSMUST00000168878 Krtap4-1Q3UUY3 169 aa4.88□□□□□ -1.63
Shroom3-204ENSMUST00000168878 ZanO88799 5376 aa4.85□□□□□ -1.63
Shroom3-204ENSMUST00000168878 Gm11596B1AQB0 205 aa4.84□□□□□ -1.63
Shroom3-204ENSMUST00000168878 Krtap17-1A2A5X6 109 aa4.83□□□□□ -1.64
Shroom3-204ENSMUST00000168878 Gm11564A2A4L9 201 aa4.78□□□□□ -1.64
Shroom3-204ENSMUST00000168878 Gm11563B1AQ90 168 aa4.78□□□□□ -1.64
Shroom3-204ENSMUST00000168878 Gm11595B1AQA7 289 aa4.78□□□□□ -1.64
Shroom3-204ENSMUST00000168878 Krtap4-8B1AQA8 209 aa4.78□□□□□ -1.64
Shroom3-204ENSMUST00000168878 2300003K06RikA2A4M0 262 aa4.74□□□□□ -1.65
Shroom3-204ENSMUST00000168878 Krtap4-9B1AQA9 244 aa4.73□□□□□ -1.65
Shroom3-204ENSMUST00000168878 Muc5bE9Q5I3 4800 aa4.7□□□□□ -1.66
Shroom3-204ENSMUST00000168878 Lce1kJ3QP15 125 aa4.68□□□□□ -1.66
Shroom3-204ENSMUST00000168878 Krtap4-7Q9D732 168 aa4.68□□□□□ -1.66
Shroom3-204ENSMUST00000168878 Krtap4-16Q91W93 202 aa4.64□□□□□ -1.67
Shroom3-204ENSMUST00000168878 Mt3P28184 68 aa4.63□□□□□ -1.67
Shroom3-204ENSMUST00000168878 Rnf213E9Q555 5152 aaKnown RBP4.62□□□□□ -1.67
Shroom3-204ENSMUST00000168878 Krtap4-13Q9D7P3 165 aa4.61□□□□□ -1.67
Shroom3-204ENSMUST00000168878 Ush2AQ2QI47 5193 aa4.6□□□□□ -1.67
Shroom3-204ENSMUST00000168878 Fsip2A2ARZ3 6995 aa4.42□□□□□ -1.7
Shroom3-204ENSMUST00000168878 Syne2Q6ZWQ0 6874 aaKnown RBP4.41□□□□□ -1.7
Shroom3-204ENSMUST00000168878 Mt1P02802 61 aaKnown RBP4.39□□□□□ -1.71
Shroom3-204ENSMUST00000168878 Lce1a1Q9CQH5 143 aa4.38□□□□□ -1.71
Shroom3-204ENSMUST00000168878 SspoQ8CG65 4998 aa4.35□□□□□ -1.71
Shroom3-204ENSMUST00000168878 Krtap6-3A0A087WQL6 57 aa4.29□□□□□ -1.72
Shroom3-204ENSMUST00000168878 Muc16A0A140LJ72 8478 aa4.19□□□□□ -1.74
Shroom3-204ENSMUST00000168878 ObscnA2AAJ9 8891 aaKnown RBP4.17□□□□□ -1.74
Shroom3-204ENSMUST00000168878 Gm11554B1AQB2 190 aa4.11□□□□□ -1.75
Shroom3-204ENSMUST00000168878 Sprr2bO70554 98 aa4.08□□□□□ -1.76
Shroom3-204ENSMUST00000168878 Krtap20-2E9Q0A8 60 aa4.01□□□□□ -1.77
Shroom3-204ENSMUST00000168878 Krtap31-2Q8CAY5 177 aa3.86□□□□□ -1.79
Shroom3-204ENSMUST00000168878 Gm11555B1AQ89 175 aa3.74□□□□□ -1.81
Shroom3-204ENSMUST00000168878 Eppk1Q8R0W0 6548 aa3.68□□□□□ -1.82
Shroom3-204ENSMUST00000168878 Kmt2dQ6PDK2 5588 aa3.67□□□□□ -1.82
Shroom3-204ENSMUST00000168878 1110025L11RikO09048 78 aa3.58□□□□□ -1.84
Shroom3-204ENSMUST00000168878 Krtap6-5Q925H3 78 aa3.58□□□□□ -1.84
Shroom3-204ENSMUST00000168878 Macf1Q9QXZ0 7354 aaKnown RBP3.56□□□□□ -1.84
Shroom3-204ENSMUST00000168878 DstQ91ZU6 7393 aaKnown RBP3.55□□□□□ -1.84
Shroom3-204ENSMUST00000168878 NebE9Q1W3 7152 aa3.41□□□□□ -1.86
Shroom3-204ENSMUST00000168878 Gm10229O08631 77 aa3.37□□□□□ -1.87
Shroom3-204ENSMUST00000168878 Gm11559Q9D3H7 191 aa3.27□□□□□ -1.89
Shroom3-204ENSMUST00000168878 Muc19Q6PZE0 7524 aa3.24□□□□□ -1.89
Shroom3-204ENSMUST00000168878 Gm11568A2A4M2 211 aa3.24□□□□□ -1.89
Shroom3-204ENSMUST00000168878 Krtap9-1Q64526 186 aa3.24□□□□□ -1.89
Shroom3-204ENSMUST00000168878 Phgr1Q8K0G7 91 aa3.23□□□□□ -1.89
Shroom3-204ENSMUST00000168878 Gm11639A0A1D5RLM8 5808 aa3.05□□□□□ -1.92
Shroom3-204ENSMUST00000168878 Krtap5-2Q9D5Z7 189 aa2.9□□□□□ -1.95
Shroom3-204ENSMUST00000168878 Gpr98Q8VHN7 6298 aaKnown RBP2.83□□□□□ -1.96
Shroom3-204ENSMUST00000168878 Hmcn1D3YXG0 5634 aa2.75□□□□□ -1.97
Shroom3-204ENSMUST00000168878 Gm4553A0A1B0GSA9 284 aa2.72□□□□□ -1.97
Shroom3-204ENSMUST00000168878 Krtap6-2O08884 159 aa2.69□□□□□ -1.98
Shroom3-204ENSMUST00000168878 Gm2431E9Q8S1 172 aa2.58□□□□□ -2
Shroom3-204ENSMUST00000168878 Krtap21-1Q925H4 128 aa2.55□□□□□ -2
Shroom3-204ENSMUST00000168878 Gm10153A0A1B0GRL1 320 aa2.49□□□□□ -2.01
Shroom3-204ENSMUST00000168878 A030005L19RikA0A1Y7VIU2 113 aa2.48□□□□□ -2.01
Shroom3-204ENSMUST00000168878 AhnakE9Q616 5656 aaKnown RBP2.46□□□□□ -2.02
Shroom3-204ENSMUST00000168878 Gm11567Q9D141 195 aa2.41□□□□□ -2.02
Shroom3-204ENSMUST00000168878 Gm45337A0A1B0GS71 263 aa2.36□□□□□ -2.03
Shroom3-204ENSMUST00000168878 Gm40460A0A1B0GR10 244 aa2.33□□□□□ -2.04
Shroom3-204ENSMUST00000168878 Gm7579A0A1B0GRJ4 243 aa2.33□□□□□ -2.04
Shroom3-204ENSMUST00000168878 Krtap5-5Q2TA51 241 aa2.33□□□□□ -2.04
Shroom3-204ENSMUST00000168878 Krtap5-4Q62220 223 aa2.33□□□□□ -2.04
Shroom3-204ENSMUST00000168878 Gm39115A0A1B0GSH7 232 aa2.17□□□□□ -2.06
Shroom3-204ENSMUST00000168878 A0A1Y7VJH8 109 aa2.16□□□□□ -2.06
Shroom3-204ENSMUST00000168878 Gm45618A0A1B0GSA0 219 aa1.84□□□□□ -2.12
Shroom3-204ENSMUST00000168878 A0A1Y7VLE6 161 aa1.76□□□□□ -2.13
Shroom3-204ENSMUST00000168878 Gm29735A0A1B0GT06 219 aa1.76□□□□□ -2.13
Shroom3-204ENSMUST00000168878 Krtap5-1Q64507 230 aa1.44□□□□□ -2.18
Shroom3-204ENSMUST00000168878 A0A1Y7VJ07 166 aa1.14□□□□□ -2.23
Shroom3-204ENSMUST00000168878 A0A286YCP9 139 aa1.09□□□□□ -2.24
Shroom3-204ENSMUST00000168878 Gm4559A4IF42 199 aa0.93□□□□□ -2.26
Shroom3-204ENSMUST00000168878 A030003K21RikA0A1Y7VIM3 128 aa0.8□□□□□ -2.28
Shroom3-204ENSMUST00000168878 Krtap28-10A0A1Y7VP58 119 aa0.62□□□□□ -2.31
Shroom3-204ENSMUST00000168878 Gm6217A0A1Y7VJK9 128 aa0.59□□□□□ -2.31
Shroom3-204ENSMUST00000168878 A030014E15RikA0A1Y7VJV2 120 aa0.51□□□□□ -2.33
Shroom3-204ENSMUST00000168878 Krtap28-13A0A087WQP5 138 aa0.45□□□□□ -2.34
Shroom3-204ENSMUST00000168878 A030005K14RikA0A1Y7VNY1 122 aa0.41□□□□□ -2.34
Shroom3-204ENSMUST00000168878 Gm7544A0A1Y7VJ58 118 aa0.36□□□□□ -2.35
Retrieved 80 of 22,080 RNA–protein pairs in 66 ms