RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Krtap4-9B1AQA9 244 aa5,15□□□□□ -1,59
Pcf11-201ENSMUST00000119954 Krtap4-13Q9D7P3 165 aa5,08□□□□□ -1,6
Pcf11-201ENSMUST00000119954 Gm11562A0PK51 136 aa5,06□□□□□ -1,6
Pcf11-201ENSMUST00000119954 Gm11938Q9D3H4 131 aa5,04□□□□□ -1,6
Pcf11-201ENSMUST00000119954 Lce1kJ3QP15 125 aa5,03□□□□□ -1,6
Pcf11-201ENSMUST00000119954 Lce1a2Q9D1K4 149 aa5,02□□□□□ -1,61
Pcf11-201ENSMUST00000119954 Lce1a1Q9CQH5 143 aa5,01□□□□□ -1,61
Pcf11-201ENSMUST00000119954 Sprr2bO70554 98 aa5,01□□□□□ -1,61
Pcf11-201ENSMUST00000119954 Kiaa1109A2AAE1 5005 aa5□□□□□ -1,61
Pcf11-201ENSMUST00000119954 Abca13Q5SSE9 5034 aa4,97□□□□□ -1,61
Pcf11-201ENSMUST00000119954 Mdn1A2ANY6 5589 aaKnown RBP4,94□□□□□ -1,62
Pcf11-201ENSMUST00000119954 Krtap4-16Q91W93 202 aa4,91□□□□□ -1,62
Pcf11-201ENSMUST00000119954 Mt3P28184 68 aa4,91□□□□□ -1,62
Pcf11-201ENSMUST00000119954 Krtap31-2Q8CAY5 177 aa4,91□□□□□ -1,62
Pcf11-201ENSMUST00000119954 Birc6O88738 4882 aa4,87□□□□□ -1,63
Pcf11-201ENSMUST00000119954 Fsip2A2ARZ3 6995 aa4,74□□□□□ -1,65
Pcf11-201ENSMUST00000119954 Gm11554B1AQB2 190 aa4,73□□□□□ -1,65
Pcf11-201ENSMUST00000119954 Krtap17-1A2A5X6 109 aa4,68□□□□□ -1,66
Pcf11-201ENSMUST00000119954 Syne2Q6ZWQ0 6874 aaKnown RBP4,66□□□□□ -1,66
Pcf11-201ENSMUST00000119954 Ubr4A2AN08 5180 aa4,65□□□□□ -1,67
Pcf11-201ENSMUST00000119954 4932415D10RikA0A1W2P6U8 4986 aa4,6□□□□□ -1,67
Pcf11-201ENSMUST00000119954 Muc5bE9Q5I3 4800 aa4,59□□□□□ -1,68
Pcf11-201ENSMUST00000119954 Krtap6-3A0A087WQL6 57 aa4,56□□□□□ -1,68
Pcf11-201ENSMUST00000119954 Hmcn2A2AJ76 5100 aa4,52□□□□□ -1,69
Pcf11-201ENSMUST00000119954 Mt1P02802 61 aaKnown RBP4,45□□□□□ -1,7
Pcf11-201ENSMUST00000119954 Fat4Q2PZL6 4981 aa4,39□□□□□ -1,71
Pcf11-201ENSMUST00000119954 ObscnA2AAJ9 8891 aaKnown RBP4,38□□□□□ -1,71
Pcf11-201ENSMUST00000119954 Muc16A0A140LJ72 8478 aa4,34□□□□□ -1,72
Pcf11-201ENSMUST00000119954 ZanO88799 5376 aa4,33□□□□□ -1,72
Pcf11-201ENSMUST00000119954 Krtap20-2E9Q0A8 60 aa4,26□□□□□ -1,73
Pcf11-201ENSMUST00000119954 Ush2AQ2QI47 5193 aa4,24□□□□□ -1,73
Pcf11-201ENSMUST00000119954 Rnf213E9Q555 5152 aaKnown RBP4,16□□□□□ -1,74
Pcf11-201ENSMUST00000119954 SspoQ8CG65 4998 aa3,99□□□□□ -1,77
Pcf11-201ENSMUST00000119954 A0A1Y7VLE6 161 aa3,82□□□□□ -1,8
Pcf11-201ENSMUST00000119954 Eppk1Q8R0W0 6548 aa3,82□□□□□ -1,8
Pcf11-201ENSMUST00000119954 NebE9Q1W3 7152 aa3,78□□□□□ -1,8
Pcf11-201ENSMUST00000119954 Gm11555B1AQ89 175 aa3,71□□□□□ -1,82
Pcf11-201ENSMUST00000119954 DstQ91ZU6 7393 aaKnown RBP3,71□□□□□ -1,82
Pcf11-201ENSMUST00000119954 Macf1Q9QXZ0 7354 aaKnown RBP3,7□□□□□ -1,82
Pcf11-201ENSMUST00000119954 Kmt2dQ6PDK2 5588 aa3,69□□□□□ -1,82
Pcf11-201ENSMUST00000119954 1110025L11RikO09048 78 aa3,61□□□□□ -1,83
Pcf11-201ENSMUST00000119954 Krtap6-5Q925H3 78 aa3,61□□□□□ -1,83
Pcf11-201ENSMUST00000119954 A0A1Y7VJH8 109 aa3,53□□□□□ -1,84
Pcf11-201ENSMUST00000119954 Krtap28-10A0A1Y7VP58 119 aa3,53□□□□□ -1,85
Pcf11-201ENSMUST00000119954 Gm10229O08631 77 aa3,45□□□□□ -1,86
Pcf11-201ENSMUST00000119954 Phgr1Q8K0G7 91 aa3,42□□□□□ -1,86
Pcf11-201ENSMUST00000119954 Krtap28-13A0A087WQP5 138 aa3,42□□□□□ -1,86
Pcf11-201ENSMUST00000119954 A030003K21RikA0A1Y7VIM3 128 aa3,42□□□□□ -1,86
Pcf11-201ENSMUST00000119954 A030005K14RikA0A1Y7VNY1 122 aa3,35□□□□□ -1,87
Pcf11-201ENSMUST00000119954 Muc19Q6PZE0 7524 aa3,28□□□□□ -1,88
Pcf11-201ENSMUST00000119954 A0A1Y7VJ07 166 aa3,27□□□□□ -1,89
Pcf11-201ENSMUST00000119954 A030005L19RikA0A1Y7VIU2 113 aa3,23□□□□□ -1,89
Pcf11-201ENSMUST00000119954 Gm11559Q9D3H7 191 aa3,21□□□□□ -1,9
Pcf11-201ENSMUST00000119954 Gm6217A0A1Y7VJK9 128 aa3,19□□□□□ -1,9
Pcf11-201ENSMUST00000119954 Gm7544A0A1Y7VJ58 118 aa3,18□□□□□ -1,9
Pcf11-201ENSMUST00000119954 A030014E15RikA0A1Y7VJV2 120 aa3,1□□□□□ -1,91
Pcf11-201ENSMUST00000119954 Gm11568A2A4M2 211 aa3,01□□□□□ -1,93
Pcf11-201ENSMUST00000119954 Krtap9-1Q64526 186 aa3,01□□□□□ -1,93
Pcf11-201ENSMUST00000119954 Gm11639A0A1D5RLM8 5808 aa2,99□□□□□ -1,93
Pcf11-201ENSMUST00000119954 Gm11567Q9D141 195 aa2,91□□□□□ -1,94
Pcf11-201ENSMUST00000119954 Gpr98Q8VHN7 6298 aaKnown RBP2,79□□□□□ -1,96
Pcf11-201ENSMUST00000119954 Krtap6-2O08884 159 aa2,71□□□□□ -1,98
Pcf11-201ENSMUST00000119954 Hmcn1D3YXG0 5634 aa2,7□□□□□ -1,98
Pcf11-201ENSMUST00000119954 Krtap5-2Q9D5Z7 189 aa2,63□□□□□ -1,99
Pcf11-201ENSMUST00000119954 Gm10153A0A1B0GRL1 320 aa2,48□□□□□ -2,01
Pcf11-201ENSMUST00000119954 Krtap21-1Q925H4 128 aa2,47□□□□□ -2,01
Pcf11-201ENSMUST00000119954 A0A286YCP9 139 aa2,43□□□□□ -2,02
Pcf11-201ENSMUST00000119954 Gm4553A0A1B0GSA9 284 aa2,4□□□□□ -2,02
Pcf11-201ENSMUST00000119954 Gm2431E9Q8S1 172 aa2,33□□□□□ -2,04
Pcf11-201ENSMUST00000119954 Gm45337A0A1B0GS71 263 aa2,31□□□□□ -2,04
Pcf11-201ENSMUST00000119954 Gm40460A0A1B0GR10 244 aa2,26□□□□□ -2,05
Pcf11-201ENSMUST00000119954 Gm7579A0A1B0GRJ4 243 aa2,26□□□□□ -2,05
Pcf11-201ENSMUST00000119954 Krtap5-5Q2TA51 241 aa2,26□□□□□ -2,05
Pcf11-201ENSMUST00000119954 Krtap5-4Q62220 223 aa2,26□□□□□ -2,05
Pcf11-201ENSMUST00000119954 AhnakE9Q616 5656 aaKnown RBP2,21□□□□□ -2,06
Pcf11-201ENSMUST00000119954 Gm39115A0A1B0GSH7 232 aa2,05□□□□□ -2,08
Pcf11-201ENSMUST00000119954 Gm29735A0A1B0GT06 219 aa1,72□□□□□ -2,13
Pcf11-201ENSMUST00000119954 Gm45618A0A1B0GSA0 219 aa1,69□□□□□ -2,14
Pcf11-201ENSMUST00000119954 Krtap5-1Q64507 230 aa1,42□□□□□ -2,18
Pcf11-201ENSMUST00000119954 Gm4559A4IF42 199 aa0,94□□□□□ -2,26
Retrieved 80 of 22,080 RNA–protein pairs in 40,1 ms