RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Krtap4-9B1AQA9 244 aa5.15□□□□□ -1.59
Pcf11-201ENSMUST00000119954 Krtap4-13Q9D7P3 165 aa5.08□□□□□ -1.6
Pcf11-201ENSMUST00000119954 Gm11562A0PK51 136 aa5.06□□□□□ -1.6
Pcf11-201ENSMUST00000119954 Gm11938Q9D3H4 131 aa5.04□□□□□ -1.6
Pcf11-201ENSMUST00000119954 Lce1kJ3QP15 125 aa5.03□□□□□ -1.6
Pcf11-201ENSMUST00000119954 Lce1a2Q9D1K4 149 aa5.02□□□□□ -1.61
Pcf11-201ENSMUST00000119954 Lce1a1Q9CQH5 143 aa5.01□□□□□ -1.61
Pcf11-201ENSMUST00000119954 Sprr2bO70554 98 aa5.01□□□□□ -1.61
Pcf11-201ENSMUST00000119954 Kiaa1109A2AAE1 5005 aa5□□□□□ -1.61
Pcf11-201ENSMUST00000119954 Abca13Q5SSE9 5034 aa4.97□□□□□ -1.61
Pcf11-201ENSMUST00000119954 Mdn1A2ANY6 5589 aaKnown RBP4.94□□□□□ -1.62
Pcf11-201ENSMUST00000119954 Krtap4-16Q91W93 202 aa4.91□□□□□ -1.62
Pcf11-201ENSMUST00000119954 Mt3P28184 68 aa4.91□□□□□ -1.62
Pcf11-201ENSMUST00000119954 Krtap31-2Q8CAY5 177 aa4.91□□□□□ -1.62
Pcf11-201ENSMUST00000119954 Birc6O88738 4882 aa4.87□□□□□ -1.63
Pcf11-201ENSMUST00000119954 Fsip2A2ARZ3 6995 aa4.74□□□□□ -1.65
Pcf11-201ENSMUST00000119954 Gm11554B1AQB2 190 aa4.73□□□□□ -1.65
Pcf11-201ENSMUST00000119954 Krtap17-1A2A5X6 109 aa4.68□□□□□ -1.66
Pcf11-201ENSMUST00000119954 Syne2Q6ZWQ0 6874 aaKnown RBP4.66□□□□□ -1.66
Pcf11-201ENSMUST00000119954 Ubr4A2AN08 5180 aa4.65□□□□□ -1.67
Pcf11-201ENSMUST00000119954 4932415D10RikA0A1W2P6U8 4986 aa4.6□□□□□ -1.67
Pcf11-201ENSMUST00000119954 Muc5bE9Q5I3 4800 aa4.59□□□□□ -1.68
Pcf11-201ENSMUST00000119954 Krtap6-3A0A087WQL6 57 aa4.56□□□□□ -1.68
Pcf11-201ENSMUST00000119954 Hmcn2A2AJ76 5100 aa4.52□□□□□ -1.69
Pcf11-201ENSMUST00000119954 Mt1P02802 61 aaKnown RBP4.45□□□□□ -1.7
Pcf11-201ENSMUST00000119954 Fat4Q2PZL6 4981 aa4.39□□□□□ -1.71
Pcf11-201ENSMUST00000119954 ObscnA2AAJ9 8891 aaKnown RBP4.38□□□□□ -1.71
Pcf11-201ENSMUST00000119954 Muc16A0A140LJ72 8478 aa4.34□□□□□ -1.72
Pcf11-201ENSMUST00000119954 ZanO88799 5376 aa4.33□□□□□ -1.72
Pcf11-201ENSMUST00000119954 Krtap20-2E9Q0A8 60 aa4.26□□□□□ -1.73
Pcf11-201ENSMUST00000119954 Ush2AQ2QI47 5193 aa4.24□□□□□ -1.73
Pcf11-201ENSMUST00000119954 Rnf213E9Q555 5152 aaKnown RBP4.16□□□□□ -1.74
Pcf11-201ENSMUST00000119954 SspoQ8CG65 4998 aa3.99□□□□□ -1.77
Pcf11-201ENSMUST00000119954 A0A1Y7VLE6 161 aa3.82□□□□□ -1.8
Pcf11-201ENSMUST00000119954 Eppk1Q8R0W0 6548 aa3.82□□□□□ -1.8
Pcf11-201ENSMUST00000119954 NebE9Q1W3 7152 aa3.78□□□□□ -1.8
Pcf11-201ENSMUST00000119954 Gm11555B1AQ89 175 aa3.71□□□□□ -1.82
Pcf11-201ENSMUST00000119954 DstQ91ZU6 7393 aaKnown RBP3.71□□□□□ -1.82
Pcf11-201ENSMUST00000119954 Macf1Q9QXZ0 7354 aaKnown RBP3.7□□□□□ -1.82
Pcf11-201ENSMUST00000119954 Kmt2dQ6PDK2 5588 aa3.69□□□□□ -1.82
Pcf11-201ENSMUST00000119954 1110025L11RikO09048 78 aa3.61□□□□□ -1.83
Pcf11-201ENSMUST00000119954 Krtap6-5Q925H3 78 aa3.61□□□□□ -1.83
Pcf11-201ENSMUST00000119954 A0A1Y7VJH8 109 aa3.53□□□□□ -1.84
Pcf11-201ENSMUST00000119954 Krtap28-10A0A1Y7VP58 119 aa3.53□□□□□ -1.85
Pcf11-201ENSMUST00000119954 Gm10229O08631 77 aa3.45□□□□□ -1.86
Pcf11-201ENSMUST00000119954 Phgr1Q8K0G7 91 aa3.42□□□□□ -1.86
Pcf11-201ENSMUST00000119954 Krtap28-13A0A087WQP5 138 aa3.42□□□□□ -1.86
Pcf11-201ENSMUST00000119954 A030003K21RikA0A1Y7VIM3 128 aa3.42□□□□□ -1.86
Pcf11-201ENSMUST00000119954 A030005K14RikA0A1Y7VNY1 122 aa3.35□□□□□ -1.87
Pcf11-201ENSMUST00000119954 Muc19Q6PZE0 7524 aa3.28□□□□□ -1.88
Pcf11-201ENSMUST00000119954 A0A1Y7VJ07 166 aa3.27□□□□□ -1.89
Pcf11-201ENSMUST00000119954 A030005L19RikA0A1Y7VIU2 113 aa3.23□□□□□ -1.89
Pcf11-201ENSMUST00000119954 Gm11559Q9D3H7 191 aa3.21□□□□□ -1.9
Pcf11-201ENSMUST00000119954 Gm6217A0A1Y7VJK9 128 aa3.19□□□□□ -1.9
Pcf11-201ENSMUST00000119954 Gm7544A0A1Y7VJ58 118 aa3.18□□□□□ -1.9
Pcf11-201ENSMUST00000119954 A030014E15RikA0A1Y7VJV2 120 aa3.1□□□□□ -1.91
Pcf11-201ENSMUST00000119954 Gm11568A2A4M2 211 aa3.01□□□□□ -1.93
Pcf11-201ENSMUST00000119954 Krtap9-1Q64526 186 aa3.01□□□□□ -1.93
Pcf11-201ENSMUST00000119954 Gm11639A0A1D5RLM8 5808 aa2.99□□□□□ -1.93
Pcf11-201ENSMUST00000119954 Gm11567Q9D141 195 aa2.91□□□□□ -1.94
Pcf11-201ENSMUST00000119954 Gpr98Q8VHN7 6298 aaKnown RBP2.79□□□□□ -1.96
Pcf11-201ENSMUST00000119954 Krtap6-2O08884 159 aa2.71□□□□□ -1.98
Pcf11-201ENSMUST00000119954 Hmcn1D3YXG0 5634 aa2.7□□□□□ -1.98
Pcf11-201ENSMUST00000119954 Krtap5-2Q9D5Z7 189 aa2.63□□□□□ -1.99
Pcf11-201ENSMUST00000119954 Gm10153A0A1B0GRL1 320 aa2.48□□□□□ -2.01
Pcf11-201ENSMUST00000119954 Krtap21-1Q925H4 128 aa2.47□□□□□ -2.01
Pcf11-201ENSMUST00000119954 A0A286YCP9 139 aa2.43□□□□□ -2.02
Pcf11-201ENSMUST00000119954 Gm4553A0A1B0GSA9 284 aa2.4□□□□□ -2.02
Pcf11-201ENSMUST00000119954 Gm2431E9Q8S1 172 aa2.33□□□□□ -2.04
Pcf11-201ENSMUST00000119954 Gm45337A0A1B0GS71 263 aa2.31□□□□□ -2.04
Pcf11-201ENSMUST00000119954 Gm40460A0A1B0GR10 244 aa2.26□□□□□ -2.05
Pcf11-201ENSMUST00000119954 Gm7579A0A1B0GRJ4 243 aa2.26□□□□□ -2.05
Pcf11-201ENSMUST00000119954 Krtap5-5Q2TA51 241 aa2.26□□□□□ -2.05
Pcf11-201ENSMUST00000119954 Krtap5-4Q62220 223 aa2.26□□□□□ -2.05
Pcf11-201ENSMUST00000119954 AhnakE9Q616 5656 aaKnown RBP2.21□□□□□ -2.06
Pcf11-201ENSMUST00000119954 Gm39115A0A1B0GSH7 232 aa2.05□□□□□ -2.08
Pcf11-201ENSMUST00000119954 Gm29735A0A1B0GT06 219 aa1.72□□□□□ -2.13
Pcf11-201ENSMUST00000119954 Gm45618A0A1B0GSA0 219 aa1.69□□□□□ -2.14
Pcf11-201ENSMUST00000119954 Krtap5-1Q64507 230 aa1.42□□□□□ -2.18
Pcf11-201ENSMUST00000119954 Gm4559A4IF42 199 aa0.94□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 77.7 ms