RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 Romo1P60603 79 aa4.07□□□□□ -1.76
Ssr3-202ENSMUST00000119896 Gm21798J3QNU5 87 aa4.06□□□□□ -1.76
Ssr3-202ENSMUST00000119896 Lce1a2Q9D1K4 149 aa4.05□□□□□ -1.76
Ssr3-202ENSMUST00000119896 CriptO70333 101 aa4□□□□□ -1.77
Ssr3-202ENSMUST00000119896 Defb1P56386 69 aa4□□□□□ -1.77
Ssr3-202ENSMUST00000119896 4930507D05RikQ8C9C9 103 aa3.99□□□□□ -1.77
Ssr3-202ENSMUST00000119896 BC029722A0A0N4SW31 51 aa3.96□□□□□ -1.78
Ssr3-202ENSMUST00000119896 Krtap20-2E9Q0A8 60 aa3.96□□□□□ -1.78
Ssr3-202ENSMUST00000119896 Spink7Q6IE32 76 aa3.95□□□□□ -1.78
Ssr3-202ENSMUST00000119896 Gm20537G3UYK7 97 aa3.92□□□□□ -1.78
Ssr3-202ENSMUST00000119896 Sprr2gO70558 76 aa3.91□□□□□ -1.78
Ssr3-202ENSMUST00000119896 Krtap22-2J3QNX6 67 aa3.89□□□□□ -1.79
Ssr3-202ENSMUST00000119896 Gm10153A0A1B0GRL1 320 aa3.86□□□□□ -1.79
Ssr3-202ENSMUST00000119896 Gm17606F6ZL36 78 aa3.86□□□□□ -1.79
Ssr3-202ENSMUST00000119896 Gm10142J3KMP7 120 aa3.84□□□□□ -1.8
Ssr3-202ENSMUST00000119896 Cox6b2Q80ZN9 88 aa3.83□□□□□ -1.8
Ssr3-202ENSMUST00000119896 2310046K23RikA0A0A6YVW6 87 aa3.8□□□□□ -1.8
Ssr3-202ENSMUST00000119896 Eppk1Q8R0W0 6548 aa3.8□□□□□ -1.8
Ssr3-202ENSMUST00000119896 Gm3880A0A1B0GSB3 72 aa3.79□□□□□ -1.8
Ssr3-202ENSMUST00000119896 Gm10382Q3V0T5 144 aa3.79□□□□□ -1.8
Ssr3-202ENSMUST00000119896 Ndufaf8A2AMZ4 74 aa3.77□□□□□ -1.81
Ssr3-202ENSMUST00000119896 Gm9955Q8CEJ8 102 aa3.74□□□□□ -1.81
Ssr3-202ENSMUST00000119896 Krtap5-4Q62220 223 aa3.65□□□□□ -1.83
Ssr3-202ENSMUST00000119896 Sprr2a3Q4KL71 83 aa3.62□□□□□ -1.83
Ssr3-202ENSMUST00000119896 Sprr2a1Q9CQK8 83 aa3.62□□□□□ -1.83
Ssr3-202ENSMUST00000119896 Gm45337A0A1B0GS71 263 aa3.6□□□□□ -1.83
Ssr3-202ENSMUST00000119896 Gm40193A0A1B0GT39 78 aa3.6□□□□□ -1.83
Ssr3-202ENSMUST00000119896 Gm9112A2AI92 75 aa3.6□□□□□ -1.83
Ssr3-202ENSMUST00000119896 Krtap5-2Q9D5Z7 189 aa3.59□□□□□ -1.84
Ssr3-202ENSMUST00000119896 Gm11639A0A1D5RLM8 5808 aa3.57□□□□□ -1.84
Ssr3-202ENSMUST00000119896 Gm10272F7CZ33 110 aa3.51□□□□□ -1.85
Ssr3-202ENSMUST00000119896 Sprr2iO70560 76 aa3.5□□□□□ -1.85
Ssr3-202ENSMUST00000119896 Kmt2dQ6PDK2 5588 aa3.49□□□□□ -1.85
Ssr3-202ENSMUST00000119896 Macf1Q9QXZ0 7354 aaKnown RBP3.47□□□□□ -1.85
Ssr3-202ENSMUST00000119896 Krtap19-9bQ99NG9 58 aa3.47□□□□□ -1.85
Ssr3-202ENSMUST00000119896 Gm4553A0A1B0GSA9 284 aa3.46□□□□□ -1.86
Ssr3-202ENSMUST00000119896 Gm17402F6Z0L5 76 aa3.46□□□□□ -1.86
Ssr3-202ENSMUST00000119896 Krtap7-1Q9D3I6 87 aa3.44□□□□□ -1.86
Ssr3-202ENSMUST00000119896 Mt3P28184 68 aa3.43□□□□□ -1.86
Ssr3-202ENSMUST00000119896 Camk2n1Q6QWF9 78 aa3.43□□□□□ -1.86
Ssr3-202ENSMUST00000119896 Gpr98Q8VHN7 6298 aaKnown RBP3.42□□□□□ -1.86
Ssr3-202ENSMUST00000119896 Gm11568A2A4M2 211 aa3.41□□□□□ -1.86
Ssr3-202ENSMUST00000119896 Krtap9-1Q64526 186 aa3.41□□□□□ -1.86
Ssr3-202ENSMUST00000119896 Muc19Q6PZE0 7524 aa3.36□□□□□ -1.87
Ssr3-202ENSMUST00000119896 Syne1Q6ZWR6 8799 aa3.3□□□□□ -1.88
Ssr3-202ENSMUST00000119896 Lce3bQ9CQM7 98 aa3.29□□□□□ -1.88
Ssr3-202ENSMUST00000119896 Hmcn1D3YXG0 5634 aa3.2□□□□□ -1.9
Ssr3-202ENSMUST00000119896 Gm40460A0A1B0GR10 244 aa3.15□□□□□ -1.91
Ssr3-202ENSMUST00000119896 Gm7579A0A1B0GRJ4 243 aa3.15□□□□□ -1.91
Ssr3-202ENSMUST00000119896 Krtap5-5Q2TA51 241 aa3.15□□□□□ -1.91
Ssr3-202ENSMUST00000119896 Krtap19-4Q925H7 84 aa3.13□□□□□ -1.91
Ssr3-202ENSMUST00000119896 DstQ91ZU6 7393 aaKnown RBP3.12□□□□□ -1.91
Ssr3-202ENSMUST00000119896 NebE9Q1W3 7152 aa3.11□□□□□ -1.91
Ssr3-202ENSMUST00000119896 Krtap4-16Q91W93 202 aa3.08□□□□□ -1.92
Ssr3-202ENSMUST00000119896 Tnp1P10856 55 aa3.06□□□□□ -1.92
Ssr3-202ENSMUST00000119896 Gm11938Q9D3H4 131 aa3.06□□□□□ -1.92
Ssr3-202ENSMUST00000119896 Mt1P02802 61 aaKnown RBP3.05□□□□□ -1.92
Ssr3-202ENSMUST00000119896 Krtap5-1Q64507 230 aa2.97□□□□□ -1.93
Ssr3-202ENSMUST00000119896 Sprr2fO70557 76 aa2.96□□□□□ -1.93
Ssr3-202ENSMUST00000119896 AhnakE9Q616 5656 aaKnown RBP2.94□□□□□ -1.94
Ssr3-202ENSMUST00000119896 Lce3cQ91V05 98 aa2.87□□□□□ -1.95
Ssr3-202ENSMUST00000119896 Lce3dE9Q8V1 98 aa2.82□□□□□ -1.96
Ssr3-202ENSMUST00000119896 Gm4559A4IF42 199 aa2.79□□□□□ -1.96
Ssr3-202ENSMUST00000119896 Lce3eF8VQJ0 98 aa2.7□□□□□ -1.98
Ssr3-202ENSMUST00000119896 Lce3fQ6PAI4 98 aa2.7□□□□□ -1.98
Ssr3-202ENSMUST00000119896 4933428G20RikQ9D3X4 101 aa2.69□□□□□ -1.98
Ssr3-202ENSMUST00000119896 ObscnA2AAJ9 8891 aaKnown RBP2.69□□□□□ -1.98
Ssr3-202ENSMUST00000119896 Lce3aQ497I5 98 aa2.58□□□□□ -2
Ssr3-202ENSMUST00000119896 Sprr2eO70556 76 aa2.5□□□□□ -2.01
Ssr3-202ENSMUST00000119896 Sprr2dO70555 85 aa2.42□□□□□ -2.02
Ssr3-202ENSMUST00000119896 Gm10024A0A0A0MQA4 119 aa2.39□□□□□ -2.03
Ssr3-202ENSMUST00000119896 Sprr2hO70559 108 aa2.38□□□□□ -2.03
Ssr3-202ENSMUST00000119896 Muc16A0A140LJ72 8478 aa2.27□□□□□ -2.05
Ssr3-202ENSMUST00000119896 Krtap6-5Q925H3 78 aa2.2□□□□□ -2.06
Ssr3-202ENSMUST00000119896 1110025L11RikO09048 78 aa2.13□□□□□ -2.07
Ssr3-202ENSMUST00000119896 Gm10229O08631 77 aa2.08□□□□□ -2.08
Ssr3-202ENSMUST00000119896 Sprr2bO70554 98 aa1.84□□□□□ -2.11
Ssr3-202ENSMUST00000119896 Krtap6-2O08884 159 aa1.82□□□□□ -2.12
Ssr3-202ENSMUST00000119896 Krtap21-1Q925H4 128 aa1.7□□□□□ -2.14
Ssr3-202ENSMUST00000119896 Phgr1Q8K0G7 91 aa1.39□□□□□ -2.19
Retrieved 80 of 22,080 RNA–protein pairs in 79.4 ms