RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Krtap17-1A2A5X6 109 aa4.51□□□□□ -1.69
Ubr2-201ENSMUST00000113335 Krtap4-1Q3UUY3 169 aa4.49□□□□□ -1.69
Ubr2-201ENSMUST00000113335 2300003K06RikA2A4M0 262 aa4.45□□□□□ -1.7
Ubr2-201ENSMUST00000113335 Krtap4-16Q91W93 202 aa4.43□□□□□ -1.7
Ubr2-201ENSMUST00000113335 Hmcn2A2AJ76 5100 aa4.43□□□□□ -1.7
Ubr2-201ENSMUST00000113335 4932415D10RikA0A1W2P6U8 4986 aa4.42□□□□□ -1.7
Ubr2-201ENSMUST00000113335 Fat4Q2PZL6 4981 aa4.41□□□□□ -1.7
Ubr2-201ENSMUST00000113335 Krtap4-7Q9D732 168 aa4.39□□□□□ -1.71
Ubr2-201ENSMUST00000113335 Gm11564A2A4L9 201 aa4.38□□□□□ -1.71
Ubr2-201ENSMUST00000113335 Gm11563B1AQ90 168 aa4.38□□□□□ -1.71
Ubr2-201ENSMUST00000113335 Gm11595B1AQA7 289 aa4.38□□□□□ -1.71
Ubr2-201ENSMUST00000113335 Krtap4-8B1AQA8 209 aa4.38□□□□□ -1.71
Ubr2-201ENSMUST00000113335 Lce1kJ3QP15 125 aa4.37□□□□□ -1.71
Ubr2-201ENSMUST00000113335 Krtap4-9B1AQA9 244 aa4.37□□□□□ -1.71
Ubr2-201ENSMUST00000113335 Gm11596B1AQB0 205 aa4.37□□□□□ -1.71
Ubr2-201ENSMUST00000113335 ZanO88799 5376 aa4.35□□□□□ -1.71
Ubr2-201ENSMUST00000113335 Muc5bE9Q5I3 4800 aa4.29□□□□□ -1.72
Ubr2-201ENSMUST00000113335 Krtap4-13Q9D7P3 165 aa4.28□□□□□ -1.72
Ubr2-201ENSMUST00000113335 Mt3P28184 68 aa4.28□□□□□ -1.72
Ubr2-201ENSMUST00000113335 Muc16A0A140LJ72 8478 aa4.25□□□□□ -1.73
Ubr2-201ENSMUST00000113335 Rnf213E9Q555 5152 aaKnown RBP4.17□□□□□ -1.74
Ubr2-201ENSMUST00000113335 Fsip2A2ARZ3 6995 aa4.17□□□□□ -1.74
Ubr2-201ENSMUST00000113335 Lce1a1Q9CQH5 143 aa4.06□□□□□ -1.76
Ubr2-201ENSMUST00000113335 Syne2Q6ZWQ0 6874 aaKnown RBP4.05□□□□□ -1.76
Ubr2-201ENSMUST00000113335 Ush2AQ2QI47 5193 aa4□□□□□ -1.77
Ubr2-201ENSMUST00000113335 ObscnA2AAJ9 8891 aaKnown RBP3.96□□□□□ -1.78
Ubr2-201ENSMUST00000113335 Sprr2bO70554 98 aa3.95□□□□□ -1.78
Ubr2-201ENSMUST00000113335 Mt1P02802 61 aaKnown RBP3.93□□□□□ -1.78
Ubr2-201ENSMUST00000113335 SspoQ8CG65 4998 aa3.89□□□□□ -1.79
Ubr2-201ENSMUST00000113335 Gm11554B1AQB2 190 aa3.88□□□□□ -1.79
Ubr2-201ENSMUST00000113335 Krtap6-3A0A087WQL6 57 aa3.81□□□□□ -1.8
Ubr2-201ENSMUST00000113335 Krtap20-2E9Q0A8 60 aa3.73□□□□□ -1.81
Ubr2-201ENSMUST00000113335 Krtap31-2Q8CAY5 177 aa3.71□□□□□ -1.81
Ubr2-201ENSMUST00000113335 Macf1Q9QXZ0 7354 aaKnown RBP3.55□□□□□ -1.84
Ubr2-201ENSMUST00000113335 NebE9Q1W3 7152 aa3.38□□□□□ -1.87
Ubr2-201ENSMUST00000113335 DstQ91ZU6 7393 aaKnown RBP3.35□□□□□ -1.87
Ubr2-201ENSMUST00000113335 Kmt2dQ6PDK2 5588 aa3.34□□□□□ -1.87
Ubr2-201ENSMUST00000113335 Muc19Q6PZE0 7524 aa3.28□□□□□ -1.88
Ubr2-201ENSMUST00000113335 1110025L11RikO09048 78 aa3.26□□□□□ -1.89
Ubr2-201ENSMUST00000113335 Krtap6-5Q925H3 78 aa3.26□□□□□ -1.89
Ubr2-201ENSMUST00000113335 Eppk1Q8R0W0 6548 aa3.19□□□□□ -1.9
Ubr2-201ENSMUST00000113335 Gm11555B1AQ89 175 aa3.14□□□□□ -1.91
Ubr2-201ENSMUST00000113335 Gm10229O08631 77 aa3.1□□□□□ -1.91
Ubr2-201ENSMUST00000113335 Phgr1Q8K0G7 91 aa3.01□□□□□ -1.93
Ubr2-201ENSMUST00000113335 Gm11568A2A4M2 211 aa2.92□□□□□ -1.94
Ubr2-201ENSMUST00000113335 Krtap9-1Q64526 186 aa2.92□□□□□ -1.94
Ubr2-201ENSMUST00000113335 Gm11559Q9D3H7 191 aa2.87□□□□□ -1.95
Ubr2-201ENSMUST00000113335 Gm11639A0A1D5RLM8 5808 aa2.7□□□□□ -1.98
Ubr2-201ENSMUST00000113335 Gpr98Q8VHN7 6298 aaKnown RBP2.51□□□□□ -2.01
Ubr2-201ENSMUST00000113335 Krtap5-2Q9D5Z7 189 aa2.47□□□□□ -2.01
Ubr2-201ENSMUST00000113335 Krtap6-2O08884 159 aa2.46□□□□□ -2.02
Ubr2-201ENSMUST00000113335 Gm11567Q9D141 195 aa2.44□□□□□ -2.02
Ubr2-201ENSMUST00000113335 Hmcn1D3YXG0 5634 aa2.44□□□□□ -2.02
Ubr2-201ENSMUST00000113335 Gm4553A0A1B0GSA9 284 aa2.29□□□□□ -2.04
Ubr2-201ENSMUST00000113335 Krtap21-1Q925H4 128 aa2.28□□□□□ -2.04
Ubr2-201ENSMUST00000113335 Gm2431E9Q8S1 172 aa2.19□□□□□ -2.06
Ubr2-201ENSMUST00000113335 AhnakE9Q616 5656 aaKnown RBP2.17□□□□□ -2.06
Ubr2-201ENSMUST00000113335 Gm10153A0A1B0GRL1 320 aa2.13□□□□□ -2.07
Ubr2-201ENSMUST00000113335 A0A1Y7VJH8 109 aa2.05□□□□□ -2.08
Ubr2-201ENSMUST00000113335 A030005L19RikA0A1Y7VIU2 113 aa1.94□□□□□ -2.1
Ubr2-201ENSMUST00000113335 A030003K21RikA0A1Y7VIM3 128 aa1.93□□□□□ -2.1
Ubr2-201ENSMUST00000113335 Gm45337A0A1B0GS71 263 aa1.93□□□□□ -2.1
Ubr2-201ENSMUST00000113335 Gm40460A0A1B0GR10 244 aa1.91□□□□□ -2.1
Ubr2-201ENSMUST00000113335 Gm7579A0A1B0GRJ4 243 aa1.91□□□□□ -2.1
Ubr2-201ENSMUST00000113335 A0A1Y7VLE6 161 aa1.91□□□□□ -2.1
Ubr2-201ENSMUST00000113335 Krtap5-5Q2TA51 241 aa1.91□□□□□ -2.1
Ubr2-201ENSMUST00000113335 Krtap5-4Q62220 223 aa1.91□□□□□ -2.1
Ubr2-201ENSMUST00000113335 Krtap28-10A0A1Y7VP58 119 aa1.88□□□□□ -2.11
Ubr2-201ENSMUST00000113335 A0A1Y7VJ07 166 aa1.83□□□□□ -2.12
Ubr2-201ENSMUST00000113335 Gm6217A0A1Y7VJK9 128 aa1.81□□□□□ -2.12
Ubr2-201ENSMUST00000113335 A030014E15RikA0A1Y7VJV2 120 aa1.75□□□□□ -2.13
Ubr2-201ENSMUST00000113335 Gm39115A0A1B0GSH7 232 aa1.72□□□□□ -2.13
Ubr2-201ENSMUST00000113335 A030005K14RikA0A1Y7VNY1 122 aa1.64□□□□□ -2.15
Ubr2-201ENSMUST00000113335 Gm7544A0A1Y7VJ58 118 aa1.57□□□□□ -2.16
Ubr2-201ENSMUST00000113335 Krtap28-13A0A087WQP5 138 aa1.53□□□□□ -2.16
Ubr2-201ENSMUST00000113335 A0A286YCP9 139 aa1.53□□□□□ -2.17
Ubr2-201ENSMUST00000113335 Gm29735A0A1B0GT06 219 aa1.45□□□□□ -2.18
Ubr2-201ENSMUST00000113335 Gm45618A0A1B0GSA0 219 aa1.42□□□□□ -2.18
Ubr2-201ENSMUST00000113335 Krtap5-1Q64507 230 aa1.2□□□□□ -2.22
Ubr2-201ENSMUST00000113335 Gm4559A4IF42 199 aa0.75□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 1072 ms