RNA–Protein interactions for RNA: ENSMUST00000112558.9

Atp2c1-204, Transcript of Calcium-transporting ATPase type 2C member 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Atp2c1, Length 5,642 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2c1-204ENSMUST00000112558 Gm11564A2A4L9 201 aa5,57□□□□□ -1,52
Atp2c1-204ENSMUST00000112558 Gm11563B1AQ90 168 aa5,57□□□□□ -1,52
Atp2c1-204ENSMUST00000112558 Gm11595B1AQA7 289 aa5,57□□□□□ -1,52
Atp2c1-204ENSMUST00000112558 Krtap4-8B1AQA8 209 aa5,57□□□□□ -1,52
Atp2c1-204ENSMUST00000112558 Krtap4-9B1AQA9 244 aa5,51□□□□□ -1,53
Atp2c1-204ENSMUST00000112558 Ush2AQ2QI47 5193 aa5,46□□□□□ -1,54
Atp2c1-204ENSMUST00000112558 Rnf213E9Q555 5152 aaKnown RBP5,45□□□□□ -1,54
Atp2c1-204ENSMUST00000112558 2300003K06RikA2A4M0 262 aa5,45□□□□□ -1,54
Atp2c1-204ENSMUST00000112558 Krtap4-7Q9D732 168 aa5,41□□□□□ -1,54
Atp2c1-204ENSMUST00000112558 Krtap4-13Q9D7P3 165 aa5,32□□□□□ -1,56
Atp2c1-204ENSMUST00000112558 Gm11562A0PK51 136 aa5,31□□□□□ -1,56
Atp2c1-204ENSMUST00000112558 Hmcn2A2AJ76 5100 aa5,3□□□□□ -1,56
Atp2c1-204ENSMUST00000112558 Gm11938Q9D3H4 131 aa5,29□□□□□ -1,56
Atp2c1-204ENSMUST00000112558 A0A1Y7VLE6 161 aa5,29□□□□□ -1,56
Atp2c1-204ENSMUST00000112558 Krtap17-1A2A5X6 109 aa5,27□□□□□ -1,57
Atp2c1-204ENSMUST00000112558 Sprr2dO70555 85 aa5,24□□□□□ -1,57
Atp2c1-204ENSMUST00000112558 Lce1kJ3QP15 125 aa5,2□□□□□ -1,58
Atp2c1-204ENSMUST00000112558 Syne2Q6ZWQ0 6874 aaKnown RBP5,2□□□□□ -1,58
Atp2c1-204ENSMUST00000112558 SspoQ8CG65 4998 aa5,17□□□□□ -1,58
Atp2c1-204ENSMUST00000112558 Krtap6-3A0A087WQL6 57 aa5,16□□□□□ -1,58
Atp2c1-204ENSMUST00000112558 Sprr2hO70559 108 aa5,14□□□□□ -1,59
Atp2c1-204ENSMUST00000112558 Mt3P28184 68 aa5,1□□□□□ -1,59
Atp2c1-204ENSMUST00000112558 Syne1Q6ZWR6 8799 aa5,05□□□□□ -1,6
Atp2c1-204ENSMUST00000112558 Fsip2A2ARZ3 6995 aa5,04□□□□□ -1,6
Atp2c1-204ENSMUST00000112558 Lce1a1Q9CQH5 143 aa5□□□□□ -1,61
Atp2c1-204ENSMUST00000112558 Krtap31-1Q9D644 177 aa4,88□□□□□ -1,63
Atp2c1-204ENSMUST00000112558 A030003K21RikA0A1Y7VIM3 128 aa4,88□□□□□ -1,63
Atp2c1-204ENSMUST00000112558 Mt1P02802 61 aaKnown RBP4,74□□□□□ -1,65
Atp2c1-204ENSMUST00000112558 Gm11554B1AQB2 190 aa4,71□□□□□ -1,66
Atp2c1-204ENSMUST00000112558 Eppk1Q8R0W0 6548 aa4,69□□□□□ -1,66
Atp2c1-204ENSMUST00000112558 Krtap20-2E9Q0A8 60 aa4,67□□□□□ -1,66
Atp2c1-204ENSMUST00000112558 Gm11555B1AQ89 175 aa4,61□□□□□ -1,67
Atp2c1-204ENSMUST00000112558 Gm6217A0A1Y7VJK9 128 aa4,57□□□□□ -1,68
Atp2c1-204ENSMUST00000112558 ObscnA2AAJ9 8891 aaKnown RBP4,48□□□□□ -1,69
Atp2c1-204ENSMUST00000112558 Krtap4-16Q91W93 202 aa4,31□□□□□ -1,72
Atp2c1-204ENSMUST00000112558 A0A1Y7VJH8 109 aa4,3□□□□□ -1,72
Atp2c1-204ENSMUST00000112558 Krtap28-10A0A1Y7VP58 119 aa4,29□□□□□ -1,72
Atp2c1-204ENSMUST00000112558 Sprr2bO70554 98 aa4,28□□□□□ -1,72
Atp2c1-204ENSMUST00000112558 Kmt2dQ6PDK2 5588 aa4,21□□□□□ -1,74
Atp2c1-204ENSMUST00000112558 Muc16A0A140LJ72 8478 aa4,2□□□□□ -1,74
Atp2c1-204ENSMUST00000112558 Macf1Q9QXZ0 7354 aaKnown RBP4,15□□□□□ -1,75
Atp2c1-204ENSMUST00000112558 A0A1Y7VJ07 166 aa4,13□□□□□ -1,75
Atp2c1-204ENSMUST00000112558 DstQ91ZU6 7393 aaKnown RBP4,12□□□□□ -1,75
Atp2c1-204ENSMUST00000112558 Krtap28-13A0A087WQP5 138 aa4,11□□□□□ -1,75
Atp2c1-204ENSMUST00000112558 Gm7544A0A1Y7VJ58 118 aa4,08□□□□□ -1,76
Atp2c1-204ENSMUST00000112558 A030005K14RikA0A1Y7VNY1 122 aa4,08□□□□□ -1,76
Atp2c1-204ENSMUST00000112558 A030005L19RikA0A1Y7VIU2 113 aa3,96□□□□□ -1,77
Atp2c1-204ENSMUST00000112558 NebE9Q1W3 7152 aa3,96□□□□□ -1,78
Atp2c1-204ENSMUST00000112558 Gm11559Q9D3H7 191 aa3,94□□□□□ -1,78
Atp2c1-204ENSMUST00000112558 Krtap31-2Q8CAY5 177 aa3,87□□□□□ -1,79
Atp2c1-204ENSMUST00000112558 1110025L11RikO09048 78 aa3,85□□□□□ -1,79
Atp2c1-204ENSMUST00000112558 Krtap6-5Q925H3 78 aa3,85□□□□□ -1,79
Atp2c1-204ENSMUST00000112558 Gm11568A2A4M2 211 aa3,8□□□□□ -1,8
Atp2c1-204ENSMUST00000112558 Krtap9-1Q64526 186 aa3,8□□□□□ -1,8
Atp2c1-204ENSMUST00000112558 Gm11639A0A1D5RLM8 5808 aa3,73□□□□□ -1,81
Atp2c1-204ENSMUST00000112558 A030014E15RikA0A1Y7VJV2 120 aa3,71□□□□□ -1,82
Atp2c1-204ENSMUST00000112558 Gpr98Q8VHN7 6298 aaKnown RBP3,7□□□□□ -1,82
Atp2c1-204ENSMUST00000112558 Gm10229O08631 77 aa3,62□□□□□ -1,83
Atp2c1-204ENSMUST00000112558 Krtap5-2Q9D5Z7 189 aa3,62□□□□□ -1,83
Atp2c1-204ENSMUST00000112558 Muc19Q6PZE0 7524 aa3,48□□□□□ -1,85
Atp2c1-204ENSMUST00000112558 Gm4553A0A1B0GSA9 284 aa3,44□□□□□ -1,86
Atp2c1-204ENSMUST00000112558 Hmcn1D3YXG0 5634 aa3,39□□□□□ -1,87
Atp2c1-204ENSMUST00000112558 Gm2431E9Q8S1 172 aa3,18□□□□□ -1,9
Atp2c1-204ENSMUST00000112558 Phgr1Q8K0G7 91 aa3,16□□□□□ -1,9
Atp2c1-204ENSMUST00000112558 AhnakE9Q616 5656 aaKnown RBP3,09□□□□□ -1,91
Atp2c1-204ENSMUST00000112558 Gm10153A0A1B0GRL1 320 aa3,06□□□□□ -1,92
Atp2c1-204ENSMUST00000112558 Gm45337A0A1B0GS71 263 aa3,03□□□□□ -1,92
Atp2c1-204ENSMUST00000112558 A0A286YCP9 139 aa3,02□□□□□ -1,93
Atp2c1-204ENSMUST00000112558 Gm40460A0A1B0GR10 244 aa3,01□□□□□ -1,93
Atp2c1-204ENSMUST00000112558 Gm7579A0A1B0GRJ4 243 aa3,01□□□□□ -1,93
Atp2c1-204ENSMUST00000112558 Krtap5-5Q2TA51 241 aa3,01□□□□□ -1,93
Atp2c1-204ENSMUST00000112558 Krtap5-4Q62220 223 aa3,01□□□□□ -1,93
Atp2c1-204ENSMUST00000112558 Krtap6-2O08884 159 aa2,96□□□□□ -1,94
Atp2c1-204ENSMUST00000112558 Gm39115A0A1B0GSH7 232 aa2,82□□□□□ -1,96
Atp2c1-204ENSMUST00000112558 Krtap21-1Q925H4 128 aa2,76□□□□□ -1,97
Atp2c1-204ENSMUST00000112558 Gm45618A0A1B0GSA0 219 aa2,48□□□□□ -2,01
Atp2c1-204ENSMUST00000112558 Gm11567Q9D141 195 aa2,39□□□□□ -2,03
Atp2c1-204ENSMUST00000112558 Gm29735A0A1B0GT06 219 aa2,27□□□□□ -2,05
Atp2c1-204ENSMUST00000112558 Krtap5-1Q64507 230 aa1,74□□□□□ -2,13
Atp2c1-204ENSMUST00000112558 Gm4559A4IF42 199 aa1,17□□□□□ -2,22
Retrieved 80 of 22,080 RNA–protein pairs in 63,4 ms