RNA–Protein interactions for RNA: ENSMUST00000112558.9

Atp2c1-204, Transcript of Calcium-transporting ATPase type 2C member 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Atp2c1, Length 5,642 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2c1-204ENSMUST00000112558 Gm11564A2A4L9 201 aa5.57□□□□□ -1.52
Atp2c1-204ENSMUST00000112558 Gm11563B1AQ90 168 aa5.57□□□□□ -1.52
Atp2c1-204ENSMUST00000112558 Gm11595B1AQA7 289 aa5.57□□□□□ -1.52
Atp2c1-204ENSMUST00000112558 Krtap4-8B1AQA8 209 aa5.57□□□□□ -1.52
Atp2c1-204ENSMUST00000112558 Krtap4-9B1AQA9 244 aa5.51□□□□□ -1.53
Atp2c1-204ENSMUST00000112558 Ush2AQ2QI47 5193 aa5.46□□□□□ -1.54
Atp2c1-204ENSMUST00000112558 Rnf213E9Q555 5152 aaKnown RBP5.45□□□□□ -1.54
Atp2c1-204ENSMUST00000112558 2300003K06RikA2A4M0 262 aa5.45□□□□□ -1.54
Atp2c1-204ENSMUST00000112558 Krtap4-7Q9D732 168 aa5.41□□□□□ -1.54
Atp2c1-204ENSMUST00000112558 Krtap4-13Q9D7P3 165 aa5.32□□□□□ -1.56
Atp2c1-204ENSMUST00000112558 Gm11562A0PK51 136 aa5.31□□□□□ -1.56
Atp2c1-204ENSMUST00000112558 Hmcn2A2AJ76 5100 aa5.3□□□□□ -1.56
Atp2c1-204ENSMUST00000112558 Gm11938Q9D3H4 131 aa5.29□□□□□ -1.56
Atp2c1-204ENSMUST00000112558 A0A1Y7VLE6 161 aa5.29□□□□□ -1.56
Atp2c1-204ENSMUST00000112558 Krtap17-1A2A5X6 109 aa5.27□□□□□ -1.57
Atp2c1-204ENSMUST00000112558 Sprr2dO70555 85 aa5.24□□□□□ -1.57
Atp2c1-204ENSMUST00000112558 Lce1kJ3QP15 125 aa5.2□□□□□ -1.58
Atp2c1-204ENSMUST00000112558 Syne2Q6ZWQ0 6874 aaKnown RBP5.2□□□□□ -1.58
Atp2c1-204ENSMUST00000112558 SspoQ8CG65 4998 aa5.17□□□□□ -1.58
Atp2c1-204ENSMUST00000112558 Krtap6-3A0A087WQL6 57 aa5.16□□□□□ -1.58
Atp2c1-204ENSMUST00000112558 Sprr2hO70559 108 aa5.14□□□□□ -1.59
Atp2c1-204ENSMUST00000112558 Mt3P28184 68 aa5.1□□□□□ -1.59
Atp2c1-204ENSMUST00000112558 Syne1Q6ZWR6 8799 aa5.05□□□□□ -1.6
Atp2c1-204ENSMUST00000112558 Fsip2A2ARZ3 6995 aa5.04□□□□□ -1.6
Atp2c1-204ENSMUST00000112558 Lce1a1Q9CQH5 143 aa5□□□□□ -1.61
Atp2c1-204ENSMUST00000112558 Krtap31-1Q9D644 177 aa4.88□□□□□ -1.63
Atp2c1-204ENSMUST00000112558 A030003K21RikA0A1Y7VIM3 128 aa4.88□□□□□ -1.63
Atp2c1-204ENSMUST00000112558 Mt1P02802 61 aaKnown RBP4.74□□□□□ -1.65
Atp2c1-204ENSMUST00000112558 Gm11554B1AQB2 190 aa4.71□□□□□ -1.66
Atp2c1-204ENSMUST00000112558 Eppk1Q8R0W0 6548 aa4.69□□□□□ -1.66
Atp2c1-204ENSMUST00000112558 Krtap20-2E9Q0A8 60 aa4.67□□□□□ -1.66
Atp2c1-204ENSMUST00000112558 Gm11555B1AQ89 175 aa4.61□□□□□ -1.67
Atp2c1-204ENSMUST00000112558 Gm6217A0A1Y7VJK9 128 aa4.57□□□□□ -1.68
Atp2c1-204ENSMUST00000112558 ObscnA2AAJ9 8891 aaKnown RBP4.48□□□□□ -1.69
Atp2c1-204ENSMUST00000112558 Krtap4-16Q91W93 202 aa4.31□□□□□ -1.72
Atp2c1-204ENSMUST00000112558 A0A1Y7VJH8 109 aa4.3□□□□□ -1.72
Atp2c1-204ENSMUST00000112558 Krtap28-10A0A1Y7VP58 119 aa4.29□□□□□ -1.72
Atp2c1-204ENSMUST00000112558 Sprr2bO70554 98 aa4.28□□□□□ -1.72
Atp2c1-204ENSMUST00000112558 Kmt2dQ6PDK2 5588 aa4.21□□□□□ -1.74
Atp2c1-204ENSMUST00000112558 Muc16A0A140LJ72 8478 aa4.2□□□□□ -1.74
Atp2c1-204ENSMUST00000112558 Macf1Q9QXZ0 7354 aaKnown RBP4.15□□□□□ -1.75
Atp2c1-204ENSMUST00000112558 A0A1Y7VJ07 166 aa4.13□□□□□ -1.75
Atp2c1-204ENSMUST00000112558 DstQ91ZU6 7393 aaKnown RBP4.12□□□□□ -1.75
Atp2c1-204ENSMUST00000112558 Krtap28-13A0A087WQP5 138 aa4.11□□□□□ -1.75
Atp2c1-204ENSMUST00000112558 Gm7544A0A1Y7VJ58 118 aa4.08□□□□□ -1.76
Atp2c1-204ENSMUST00000112558 A030005K14RikA0A1Y7VNY1 122 aa4.08□□□□□ -1.76
Atp2c1-204ENSMUST00000112558 A030005L19RikA0A1Y7VIU2 113 aa3.96□□□□□ -1.77
Atp2c1-204ENSMUST00000112558 NebE9Q1W3 7152 aa3.96□□□□□ -1.78
Atp2c1-204ENSMUST00000112558 Gm11559Q9D3H7 191 aa3.94□□□□□ -1.78
Atp2c1-204ENSMUST00000112558 Krtap31-2Q8CAY5 177 aa3.87□□□□□ -1.79
Atp2c1-204ENSMUST00000112558 1110025L11RikO09048 78 aa3.85□□□□□ -1.79
Atp2c1-204ENSMUST00000112558 Krtap6-5Q925H3 78 aa3.85□□□□□ -1.79
Atp2c1-204ENSMUST00000112558 Gm11568A2A4M2 211 aa3.8□□□□□ -1.8
Atp2c1-204ENSMUST00000112558 Krtap9-1Q64526 186 aa3.8□□□□□ -1.8
Atp2c1-204ENSMUST00000112558 Gm11639A0A1D5RLM8 5808 aa3.73□□□□□ -1.81
Atp2c1-204ENSMUST00000112558 A030014E15RikA0A1Y7VJV2 120 aa3.71□□□□□ -1.82
Atp2c1-204ENSMUST00000112558 Gpr98Q8VHN7 6298 aaKnown RBP3.7□□□□□ -1.82
Atp2c1-204ENSMUST00000112558 Gm10229O08631 77 aa3.62□□□□□ -1.83
Atp2c1-204ENSMUST00000112558 Krtap5-2Q9D5Z7 189 aa3.62□□□□□ -1.83
Atp2c1-204ENSMUST00000112558 Muc19Q6PZE0 7524 aa3.48□□□□□ -1.85
Atp2c1-204ENSMUST00000112558 Gm4553A0A1B0GSA9 284 aa3.44□□□□□ -1.86
Atp2c1-204ENSMUST00000112558 Hmcn1D3YXG0 5634 aa3.39□□□□□ -1.87
Atp2c1-204ENSMUST00000112558 Gm2431E9Q8S1 172 aa3.18□□□□□ -1.9
Atp2c1-204ENSMUST00000112558 Phgr1Q8K0G7 91 aa3.16□□□□□ -1.9
Atp2c1-204ENSMUST00000112558 AhnakE9Q616 5656 aaKnown RBP3.09□□□□□ -1.91
Atp2c1-204ENSMUST00000112558 Gm10153A0A1B0GRL1 320 aa3.06□□□□□ -1.92
Atp2c1-204ENSMUST00000112558 Gm45337A0A1B0GS71 263 aa3.03□□□□□ -1.92
Atp2c1-204ENSMUST00000112558 A0A286YCP9 139 aa3.02□□□□□ -1.93
Atp2c1-204ENSMUST00000112558 Gm40460A0A1B0GR10 244 aa3.01□□□□□ -1.93
Atp2c1-204ENSMUST00000112558 Gm7579A0A1B0GRJ4 243 aa3.01□□□□□ -1.93
Atp2c1-204ENSMUST00000112558 Krtap5-5Q2TA51 241 aa3.01□□□□□ -1.93
Atp2c1-204ENSMUST00000112558 Krtap5-4Q62220 223 aa3.01□□□□□ -1.93
Atp2c1-204ENSMUST00000112558 Krtap6-2O08884 159 aa2.96□□□□□ -1.94
Atp2c1-204ENSMUST00000112558 Gm39115A0A1B0GSH7 232 aa2.82□□□□□ -1.96
Atp2c1-204ENSMUST00000112558 Krtap21-1Q925H4 128 aa2.76□□□□□ -1.97
Atp2c1-204ENSMUST00000112558 Gm45618A0A1B0GSA0 219 aa2.48□□□□□ -2.01
Atp2c1-204ENSMUST00000112558 Gm11567Q9D141 195 aa2.39□□□□□ -2.03
Atp2c1-204ENSMUST00000112558 Gm29735A0A1B0GT06 219 aa2.27□□□□□ -2.05
Atp2c1-204ENSMUST00000112558 Krtap5-1Q64507 230 aa1.74□□□□□ -2.13
Atp2c1-204ENSMUST00000112558 Gm4559A4IF42 199 aa1.17□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 167.9 ms