RNA–Protein interactions for RNA: ENSMUST00000111566.8

Clip1-205, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clip1, Length 6,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-205ENSMUST00000111566 Sprr2dO70555 85 aa5.84□□□□□ -1.47
Clip1-205ENSMUST00000111566 Syne1Q6ZWR6 8799 aa5.82□□□□□ -1.48
Clip1-205ENSMUST00000111566 Gm11938Q9D3H4 131 aa5.79□□□□□ -1.48
Clip1-205ENSMUST00000111566 Muc5bE9Q5I3 4800 aa5.76□□□□□ -1.49
Clip1-205ENSMUST00000111566 Krtap4-1Q3UUY3 169 aa5.76□□□□□ -1.49
Clip1-205ENSMUST00000111566 Ush2AQ2QI47 5193 aa5.75□□□□□ -1.49
Clip1-205ENSMUST00000111566 Gm11562A0PK51 136 aa5.72□□□□□ -1.49
Clip1-205ENSMUST00000111566 Hmcn2A2AJ76 5100 aa5.72□□□□□ -1.49
Clip1-205ENSMUST00000111566 Krtap4-16Q91W93 202 aa5.7□□□□□ -1.5
Clip1-205ENSMUST00000111566 Gm11596B1AQB0 205 aa5.68□□□□□ -1.5
Clip1-205ENSMUST00000111566 Krtap17-1A2A5X6 109 aa5.67□□□□□ -1.5
Clip1-205ENSMUST00000111566 Gm11564A2A4L9 201 aa5.64□□□□□ -1.51
Clip1-205ENSMUST00000111566 Gm11563B1AQ90 168 aa5.64□□□□□ -1.51
Clip1-205ENSMUST00000111566 Gm11595B1AQA7 289 aa5.64□□□□□ -1.51
Clip1-205ENSMUST00000111566 Krtap4-8B1AQA8 209 aa5.64□□□□□ -1.51
Clip1-205ENSMUST00000111566 Krtap4-9B1AQA9 244 aa5.61□□□□□ -1.51
Clip1-205ENSMUST00000111566 Krtap31-2Q8CAY5 177 aa5.59□□□□□ -1.51
Clip1-205ENSMUST00000111566 2300003K06RikA2A4M0 262 aa5.58□□□□□ -1.52
Clip1-205ENSMUST00000111566 Krtap4-7Q9D732 168 aa5.52□□□□□ -1.53
Clip1-205ENSMUST00000111566 Lce1kJ3QP15 125 aa5.45□□□□□ -1.54
Clip1-205ENSMUST00000111566 Krtap4-13Q9D7P3 165 aa5.44□□□□□ -1.54
Clip1-205ENSMUST00000111566 Fsip2A2ARZ3 6995 aa5.4□□□□□ -1.54
Clip1-205ENSMUST00000111566 Mt3P28184 68 aa5.37□□□□□ -1.55
Clip1-205ENSMUST00000111566 SspoQ8CG65 4998 aa5.37□□□□□ -1.55
Clip1-205ENSMUST00000111566 Syne2Q6ZWQ0 6874 aaKnown RBP5.3□□□□□ -1.56
Clip1-205ENSMUST00000111566 Lce1a1Q9CQH5 143 aa5.19□□□□□ -1.58
Clip1-205ENSMUST00000111566 Krtap6-3A0A087WQL6 57 aa5.08□□□□□ -1.6
Clip1-205ENSMUST00000111566 Muc16A0A140LJ72 8478 aa4.96□□□□□ -1.62
Clip1-205ENSMUST00000111566 Mt1P02802 61 aaKnown RBP4.95□□□□□ -1.62
Clip1-205ENSMUST00000111566 Sprr2bO70554 98 aa4.93□□□□□ -1.62
Clip1-205ENSMUST00000111566 ObscnA2AAJ9 8891 aaKnown RBP4.84□□□□□ -1.63
Clip1-205ENSMUST00000111566 Gm11554B1AQB2 190 aa4.83□□□□□ -1.64
Clip1-205ENSMUST00000111566 Krtap20-2E9Q0A8 60 aa4.79□□□□□ -1.64
Clip1-205ENSMUST00000111566 Macf1Q9QXZ0 7354 aaKnown RBP4.59□□□□□ -1.67
Clip1-205ENSMUST00000111566 Gm11555B1AQ89 175 aa4.58□□□□□ -1.68
Clip1-205ENSMUST00000111566 Eppk1Q8R0W0 6548 aa4.57□□□□□ -1.68
Clip1-205ENSMUST00000111566 Kmt2dQ6PDK2 5588 aa4.45□□□□□ -1.7
Clip1-205ENSMUST00000111566 DstQ91ZU6 7393 aaKnown RBP4.37□□□□□ -1.71
Clip1-205ENSMUST00000111566 NebE9Q1W3 7152 aa4.27□□□□□ -1.73
Clip1-205ENSMUST00000111566 1110025L11RikO09048 78 aa4.09□□□□□ -1.75
Clip1-205ENSMUST00000111566 Krtap6-5Q925H3 78 aa4.09□□□□□ -1.75
Clip1-205ENSMUST00000111566 Muc19Q6PZE0 7524 aa3.97□□□□□ -1.77
Clip1-205ENSMUST00000111566 Gm11559Q9D3H7 191 aa3.93□□□□□ -1.78
Clip1-205ENSMUST00000111566 Gm11568A2A4M2 211 aa3.93□□□□□ -1.78
Clip1-205ENSMUST00000111566 Krtap9-1Q64526 186 aa3.93□□□□□ -1.78
Clip1-205ENSMUST00000111566 Gm10229O08631 77 aa3.91□□□□□ -1.78
Clip1-205ENSMUST00000111566 Phgr1Q8K0G7 91 aa3.89□□□□□ -1.79
Clip1-205ENSMUST00000111566 Gm11639A0A1D5RLM8 5808 aa3.84□□□□□ -1.79
Clip1-205ENSMUST00000111566 Gpr98Q8VHN7 6298 aaKnown RBP3.77□□□□□ -1.81
Clip1-205ENSMUST00000111566 Krtap5-2Q9D5Z7 189 aa3.63□□□□□ -1.83
Clip1-205ENSMUST00000111566 Hmcn1D3YXG0 5634 aa3.56□□□□□ -1.84
Clip1-205ENSMUST00000111566 Gm4553A0A1B0GSA9 284 aa3.42□□□□□ -1.86
Clip1-205ENSMUST00000111566 AhnakE9Q616 5656 aaKnown RBP3.19□□□□□ -1.9
Clip1-205ENSMUST00000111566 Gm2431E9Q8S1 172 aa3.18□□□□□ -1.9
Clip1-205ENSMUST00000111566 Gm11567Q9D141 195 aa3.14□□□□□ -1.91
Clip1-205ENSMUST00000111566 Gm10153A0A1B0GRL1 320 aa3.12□□□□□ -1.91
Clip1-205ENSMUST00000111566 A030005L19RikA0A1Y7VIU2 113 aa3.11□□□□□ -1.91
Clip1-205ENSMUST00000111566 Krtap6-2O08884 159 aa3.08□□□□□ -1.92
Clip1-205ENSMUST00000111566 Gm45337A0A1B0GS71 263 aa3.01□□□□□ -1.93
Clip1-205ENSMUST00000111566 Gm40460A0A1B0GR10 244 aa2.98□□□□□ -1.93
Clip1-205ENSMUST00000111566 Gm7579A0A1B0GRJ4 243 aa2.98□□□□□ -1.93
Clip1-205ENSMUST00000111566 Krtap5-5Q2TA51 241 aa2.98□□□□□ -1.93
Clip1-205ENSMUST00000111566 Krtap5-4Q62220 223 aa2.98□□□□□ -1.93
Clip1-205ENSMUST00000111566 Krtap21-1Q925H4 128 aa2.9□□□□□ -1.94
Clip1-205ENSMUST00000111566 A0A1Y7VLE6 161 aa2.9□□□□□ -1.95
Clip1-205ENSMUST00000111566 A0A1Y7VJH8 109 aa2.8□□□□□ -1.96
Clip1-205ENSMUST00000111566 Gm39115A0A1B0GSH7 232 aa2.75□□□□□ -1.97
Clip1-205ENSMUST00000111566 A030003K21RikA0A1Y7VIM3 128 aa2.69□□□□□ -1.98
Clip1-205ENSMUST00000111566 Krtap28-10A0A1Y7VP58 119 aa2.59□□□□□ -1.99
Clip1-205ENSMUST00000111566 Krtap28-13A0A087WQP5 138 aa2.56□□□□□ -2
Clip1-205ENSMUST00000111566 A030005K14RikA0A1Y7VNY1 122 aa2.55□□□□□ -2
Clip1-205ENSMUST00000111566 Gm6217A0A1Y7VJK9 128 aa2.53□□□□□ -2
Clip1-205ENSMUST00000111566 A0A1Y7VJ07 166 aa2.49□□□□□ -2.01
Clip1-205ENSMUST00000111566 Gm7544A0A1Y7VJ58 118 aa2.4□□□□□ -2.02
Clip1-205ENSMUST00000111566 Gm45618A0A1B0GSA0 219 aa2.35□□□□□ -2.03
Clip1-205ENSMUST00000111566 Gm29735A0A1B0GT06 219 aa2.25□□□□□ -2.05
Clip1-205ENSMUST00000111566 A030014E15RikA0A1Y7VJV2 120 aa2.24□□□□□ -2.05
Clip1-205ENSMUST00000111566 A0A286YCP9 139 aa1.93□□□□□ -2.1
Clip1-205ENSMUST00000111566 Krtap5-1Q64507 230 aa1.69□□□□□ -2.14
Clip1-205ENSMUST00000111566 Gm4559A4IF42 199 aa1.13□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 13.8 ms