RNA–Protein interactions for RNA: ENSMUST00000111566.8

Clip1-205, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clip1, Length 6,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-205ENSMUST00000111566 Sprr2dO70555 85 aa5,84□□□□□ -1,47
Clip1-205ENSMUST00000111566 Syne1Q6ZWR6 8799 aa5,82□□□□□ -1,48
Clip1-205ENSMUST00000111566 Gm11938Q9D3H4 131 aa5,79□□□□□ -1,48
Clip1-205ENSMUST00000111566 Muc5bE9Q5I3 4800 aa5,76□□□□□ -1,49
Clip1-205ENSMUST00000111566 Krtap4-1Q3UUY3 169 aa5,76□□□□□ -1,49
Clip1-205ENSMUST00000111566 Ush2AQ2QI47 5193 aa5,75□□□□□ -1,49
Clip1-205ENSMUST00000111566 Gm11562A0PK51 136 aa5,72□□□□□ -1,49
Clip1-205ENSMUST00000111566 Hmcn2A2AJ76 5100 aa5,72□□□□□ -1,49
Clip1-205ENSMUST00000111566 Krtap4-16Q91W93 202 aa5,7□□□□□ -1,5
Clip1-205ENSMUST00000111566 Gm11596B1AQB0 205 aa5,68□□□□□ -1,5
Clip1-205ENSMUST00000111566 Krtap17-1A2A5X6 109 aa5,67□□□□□ -1,5
Clip1-205ENSMUST00000111566 Gm11564A2A4L9 201 aa5,64□□□□□ -1,51
Clip1-205ENSMUST00000111566 Gm11563B1AQ90 168 aa5,64□□□□□ -1,51
Clip1-205ENSMUST00000111566 Gm11595B1AQA7 289 aa5,64□□□□□ -1,51
Clip1-205ENSMUST00000111566 Krtap4-8B1AQA8 209 aa5,64□□□□□ -1,51
Clip1-205ENSMUST00000111566 Krtap4-9B1AQA9 244 aa5,61□□□□□ -1,51
Clip1-205ENSMUST00000111566 Krtap31-2Q8CAY5 177 aa5,59□□□□□ -1,51
Clip1-205ENSMUST00000111566 2300003K06RikA2A4M0 262 aa5,58□□□□□ -1,52
Clip1-205ENSMUST00000111566 Krtap4-7Q9D732 168 aa5,52□□□□□ -1,53
Clip1-205ENSMUST00000111566 Lce1kJ3QP15 125 aa5,45□□□□□ -1,54
Clip1-205ENSMUST00000111566 Krtap4-13Q9D7P3 165 aa5,44□□□□□ -1,54
Clip1-205ENSMUST00000111566 Fsip2A2ARZ3 6995 aa5,4□□□□□ -1,54
Clip1-205ENSMUST00000111566 Mt3P28184 68 aa5,37□□□□□ -1,55
Clip1-205ENSMUST00000111566 SspoQ8CG65 4998 aa5,37□□□□□ -1,55
Clip1-205ENSMUST00000111566 Syne2Q6ZWQ0 6874 aaKnown RBP5,3□□□□□ -1,56
Clip1-205ENSMUST00000111566 Lce1a1Q9CQH5 143 aa5,19□□□□□ -1,58
Clip1-205ENSMUST00000111566 Krtap6-3A0A087WQL6 57 aa5,08□□□□□ -1,6
Clip1-205ENSMUST00000111566 Muc16A0A140LJ72 8478 aa4,96□□□□□ -1,62
Clip1-205ENSMUST00000111566 Mt1P02802 61 aaKnown RBP4,95□□□□□ -1,62
Clip1-205ENSMUST00000111566 Sprr2bO70554 98 aa4,93□□□□□ -1,62
Clip1-205ENSMUST00000111566 ObscnA2AAJ9 8891 aaKnown RBP4,84□□□□□ -1,63
Clip1-205ENSMUST00000111566 Gm11554B1AQB2 190 aa4,83□□□□□ -1,64
Clip1-205ENSMUST00000111566 Krtap20-2E9Q0A8 60 aa4,79□□□□□ -1,64
Clip1-205ENSMUST00000111566 Macf1Q9QXZ0 7354 aaKnown RBP4,59□□□□□ -1,67
Clip1-205ENSMUST00000111566 Gm11555B1AQ89 175 aa4,58□□□□□ -1,68
Clip1-205ENSMUST00000111566 Eppk1Q8R0W0 6548 aa4,57□□□□□ -1,68
Clip1-205ENSMUST00000111566 Kmt2dQ6PDK2 5588 aa4,45□□□□□ -1,7
Clip1-205ENSMUST00000111566 DstQ91ZU6 7393 aaKnown RBP4,37□□□□□ -1,71
Clip1-205ENSMUST00000111566 NebE9Q1W3 7152 aa4,27□□□□□ -1,73
Clip1-205ENSMUST00000111566 1110025L11RikO09048 78 aa4,09□□□□□ -1,75
Clip1-205ENSMUST00000111566 Krtap6-5Q925H3 78 aa4,09□□□□□ -1,75
Clip1-205ENSMUST00000111566 Muc19Q6PZE0 7524 aa3,97□□□□□ -1,77
Clip1-205ENSMUST00000111566 Gm11559Q9D3H7 191 aa3,93□□□□□ -1,78
Clip1-205ENSMUST00000111566 Gm11568A2A4M2 211 aa3,93□□□□□ -1,78
Clip1-205ENSMUST00000111566 Krtap9-1Q64526 186 aa3,93□□□□□ -1,78
Clip1-205ENSMUST00000111566 Gm10229O08631 77 aa3,91□□□□□ -1,78
Clip1-205ENSMUST00000111566 Phgr1Q8K0G7 91 aa3,89□□□□□ -1,79
Clip1-205ENSMUST00000111566 Gm11639A0A1D5RLM8 5808 aa3,84□□□□□ -1,79
Clip1-205ENSMUST00000111566 Gpr98Q8VHN7 6298 aaKnown RBP3,77□□□□□ -1,81
Clip1-205ENSMUST00000111566 Krtap5-2Q9D5Z7 189 aa3,63□□□□□ -1,83
Clip1-205ENSMUST00000111566 Hmcn1D3YXG0 5634 aa3,56□□□□□ -1,84
Clip1-205ENSMUST00000111566 Gm4553A0A1B0GSA9 284 aa3,42□□□□□ -1,86
Clip1-205ENSMUST00000111566 AhnakE9Q616 5656 aaKnown RBP3,19□□□□□ -1,9
Clip1-205ENSMUST00000111566 Gm2431E9Q8S1 172 aa3,18□□□□□ -1,9
Clip1-205ENSMUST00000111566 Gm11567Q9D141 195 aa3,14□□□□□ -1,91
Clip1-205ENSMUST00000111566 Gm10153A0A1B0GRL1 320 aa3,12□□□□□ -1,91
Clip1-205ENSMUST00000111566 A030005L19RikA0A1Y7VIU2 113 aa3,11□□□□□ -1,91
Clip1-205ENSMUST00000111566 Krtap6-2O08884 159 aa3,08□□□□□ -1,92
Clip1-205ENSMUST00000111566 Gm45337A0A1B0GS71 263 aa3,01□□□□□ -1,93
Clip1-205ENSMUST00000111566 Gm40460A0A1B0GR10 244 aa2,98□□□□□ -1,93
Clip1-205ENSMUST00000111566 Gm7579A0A1B0GRJ4 243 aa2,98□□□□□ -1,93
Clip1-205ENSMUST00000111566 Krtap5-5Q2TA51 241 aa2,98□□□□□ -1,93
Clip1-205ENSMUST00000111566 Krtap5-4Q62220 223 aa2,98□□□□□ -1,93
Clip1-205ENSMUST00000111566 Krtap21-1Q925H4 128 aa2,9□□□□□ -1,94
Clip1-205ENSMUST00000111566 A0A1Y7VLE6 161 aa2,9□□□□□ -1,95
Clip1-205ENSMUST00000111566 A0A1Y7VJH8 109 aa2,8□□□□□ -1,96
Clip1-205ENSMUST00000111566 Gm39115A0A1B0GSH7 232 aa2,75□□□□□ -1,97
Clip1-205ENSMUST00000111566 A030003K21RikA0A1Y7VIM3 128 aa2,69□□□□□ -1,98
Clip1-205ENSMUST00000111566 Krtap28-10A0A1Y7VP58 119 aa2,59□□□□□ -1,99
Clip1-205ENSMUST00000111566 Krtap28-13A0A087WQP5 138 aa2,56□□□□□ -2
Clip1-205ENSMUST00000111566 A030005K14RikA0A1Y7VNY1 122 aa2,55□□□□□ -2
Clip1-205ENSMUST00000111566 Gm6217A0A1Y7VJK9 128 aa2,53□□□□□ -2
Clip1-205ENSMUST00000111566 A0A1Y7VJ07 166 aa2,49□□□□□ -2,01
Clip1-205ENSMUST00000111566 Gm7544A0A1Y7VJ58 118 aa2,4□□□□□ -2,02
Clip1-205ENSMUST00000111566 Gm45618A0A1B0GSA0 219 aa2,35□□□□□ -2,03
Clip1-205ENSMUST00000111566 Gm29735A0A1B0GT06 219 aa2,25□□□□□ -2,05
Clip1-205ENSMUST00000111566 A030014E15RikA0A1Y7VJV2 120 aa2,24□□□□□ -2,05
Clip1-205ENSMUST00000111566 A0A286YCP9 139 aa1,93□□□□□ -2,1
Clip1-205ENSMUST00000111566 Krtap5-1Q64507 230 aa1,69□□□□□ -2,14
Clip1-205ENSMUST00000111566 Gm4559A4IF42 199 aa1,13□□□□□ -2,23
Retrieved 80 of 22,080 RNA–protein pairs in 9,4 ms