RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Gm11595B1AQA7 289 aa3.25□□□□□ -1.89
Vcan-202ENSMUST00000109544 Krtap4-8B1AQA8 209 aa3.25□□□□□ -1.89
Vcan-202ENSMUST00000109544 Syne2Q6ZWQ0 6874 aaKnown RBP3.25□□□□□ -1.89
Vcan-202ENSMUST00000109544 Krtap31-1Q9D644 177 aa3.24□□□□□ -1.89
Vcan-202ENSMUST00000109544 A0A1Y7VJH8 109 aa3.24□□□□□ -1.89
Vcan-202ENSMUST00000109544 Krtap4-7Q9D732 168 aa3.2□□□□□ -1.9
Vcan-202ENSMUST00000109544 Krtap28-10A0A1Y7VP58 119 aa3.18□□□□□ -1.9
Vcan-202ENSMUST00000109544 Krtap4-9B1AQA9 244 aa3.18□□□□□ -1.9
Vcan-202ENSMUST00000109544 Gm6217A0A1Y7VJK9 128 aa3.17□□□□□ -1.9
Vcan-202ENSMUST00000109544 Krtap31-2Q8CAY5 177 aa3.17□□□□□ -1.9
Vcan-202ENSMUST00000109544 ZanO88799 5376 aa3.16□□□□□ -1.9
Vcan-202ENSMUST00000109544 Abca13Q5SSE9 5034 aa3.16□□□□□ -1.9
Vcan-202ENSMUST00000109544 Fat4Q2PZL6 4981 aa3.16□□□□□ -1.9
Vcan-202ENSMUST00000109544 Pkhd1E9PZ36 4059 aa3.16□□□□□ -1.9
Vcan-202ENSMUST00000109544 Muc5bE9Q5I3 4800 aa3.16□□□□□ -1.9
Vcan-202ENSMUST00000109544 Gm7544A0A1Y7VJ58 118 aa3.15□□□□□ -1.9
Vcan-202ENSMUST00000109544 Gm11555B1AQ89 175 aa3.14□□□□□ -1.91
Vcan-202ENSMUST00000109544 Mdn1A2ANY6 5589 aaKnown RBP3.12□□□□□ -1.91
Vcan-202ENSMUST00000109544 Ush2AQ2QI47 5193 aa3.12□□□□□ -1.91
Vcan-202ENSMUST00000109544 Krtap6-3A0A087WQL6 57 aa3.12□□□□□ -1.91
Vcan-202ENSMUST00000109544 Gm11938Q9D3H4 131 aa3.1□□□□□ -1.91
Vcan-202ENSMUST00000109544 Krtap4-13Q9D7P3 165 aa3.07□□□□□ -1.92
Vcan-202ENSMUST00000109544 Ubr4A2AN08 5180 aa3.07□□□□□ -1.92
Vcan-202ENSMUST00000109544 2300003K06RikA2A4M0 262 aa3.07□□□□□ -1.92
Vcan-202ENSMUST00000109544 Syne1Q6ZWR6 8799 aa3.03□□□□□ -1.92
Vcan-202ENSMUST00000109544 Lce1a2Q9D1K4 149 aa3.03□□□□□ -1.92
Vcan-202ENSMUST00000109544 A030005L19RikA0A1Y7VIU2 113 aa3.03□□□□□ -1.92
Vcan-202ENSMUST00000109544 Rnf213E9Q555 5152 aaKnown RBP3□□□□□ -1.93
Vcan-202ENSMUST00000109544 Eppk1Q8R0W0 6548 aa2.98□□□□□ -1.93
Vcan-202ENSMUST00000109544 Mt3P28184 68 aa2.97□□□□□ -1.93
Vcan-202ENSMUST00000109544 A030005K14RikA0A1Y7VNY1 122 aa2.97□□□□□ -1.93
Vcan-202ENSMUST00000109544 Lce1a1Q9CQH5 143 aa2.96□□□□□ -1.93
Vcan-202ENSMUST00000109544 Krtap28-13A0A087WQP5 138 aa2.95□□□□□ -1.94
Vcan-202ENSMUST00000109544 A0A1Y7VJ07 166 aa2.92□□□□□ -1.94
Vcan-202ENSMUST00000109544 Fsip2A2ARZ3 6995 aa2.9□□□□□ -1.94
Vcan-202ENSMUST00000109544 Hmcn2A2AJ76 5100 aa2.87□□□□□ -1.95
Vcan-202ENSMUST00000109544 Mt1P02802 61 aaKnown RBP2.85□□□□□ -1.95
Vcan-202ENSMUST00000109544 Krtap4-16Q91W93 202 aa2.85□□□□□ -1.95
Vcan-202ENSMUST00000109544 Lce1kJ3QP15 125 aa2.82□□□□□ -1.96
Vcan-202ENSMUST00000109544 SspoQ8CG65 4998 aa2.82□□□□□ -1.96
Vcan-202ENSMUST00000109544 Sprr2bO70554 98 aa2.81□□□□□ -1.96
Vcan-202ENSMUST00000109544 Krtap20-2E9Q0A8 60 aa2.74□□□□□ -1.97
Vcan-202ENSMUST00000109544 Gm11554B1AQB2 190 aa2.71□□□□□ -1.98
Vcan-202ENSMUST00000109544 A030014E15RikA0A1Y7VJV2 120 aa2.65□□□□□ -1.98
Vcan-202ENSMUST00000109544 ObscnA2AAJ9 8891 aaKnown RBP2.59□□□□□ -1.99
Vcan-202ENSMUST00000109544 Gpr98Q8VHN7 6298 aaKnown RBP2.4□□□□□ -2.02
Vcan-202ENSMUST00000109544 Macf1Q9QXZ0 7354 aaKnown RBP2.35□□□□□ -2.03
Vcan-202ENSMUST00000109544 Gm11559Q9D3H7 191 aa2.33□□□□□ -2.04
Vcan-202ENSMUST00000109544 DstQ91ZU6 7393 aaKnown RBP2.31□□□□□ -2.04
Vcan-202ENSMUST00000109544 NebE9Q1W3 7152 aa2.29□□□□□ -2.04
Vcan-202ENSMUST00000109544 1110025L11RikO09048 78 aa2.26□□□□□ -2.05
Vcan-202ENSMUST00000109544 Krtap6-5Q925H3 78 aa2.26□□□□□ -2.05
Vcan-202ENSMUST00000109544 A0A286YCP9 139 aa2.25□□□□□ -2.05
Vcan-202ENSMUST00000109544 Muc16A0A140LJ72 8478 aa2.25□□□□□ -2.05
Vcan-202ENSMUST00000109544 Kmt2dQ6PDK2 5588 aa2.23□□□□□ -2.05
Vcan-202ENSMUST00000109544 Gm11639A0A1D5RLM8 5808 aa2.21□□□□□ -2.06
Vcan-202ENSMUST00000109544 Gm10229O08631 77 aa2.15□□□□□ -2.07
Vcan-202ENSMUST00000109544 Gm11568A2A4M2 211 aa2.06□□□□□ -2.08
Vcan-202ENSMUST00000109544 Krtap9-1Q64526 186 aa2.06□□□□□ -2.08
Vcan-202ENSMUST00000109544 Phgr1Q8K0G7 91 aa2.05□□□□□ -2.08
Vcan-202ENSMUST00000109544 Krtap5-2Q9D5Z7 189 aa2.05□□□□□ -2.08
Vcan-202ENSMUST00000109544 Hmcn1D3YXG0 5634 aa2.01□□□□□ -2.09
Vcan-202ENSMUST00000109544 Gm4553A0A1B0GSA9 284 aa2.01□□□□□ -2.09
Vcan-202ENSMUST00000109544 Gm2431E9Q8S1 172 aa1.87□□□□□ -2.11
Vcan-202ENSMUST00000109544 AhnakE9Q616 5656 aaKnown RBP1.8□□□□□ -2.12
Vcan-202ENSMUST00000109544 Muc19Q6PZE0 7524 aa1.76□□□□□ -2.13
Vcan-202ENSMUST00000109544 Gm45337A0A1B0GS71 263 aa1.74□□□□□ -2.13
Vcan-202ENSMUST00000109544 Gm40460A0A1B0GR10 244 aa1.71□□□□□ -2.14
Vcan-202ENSMUST00000109544 Gm7579A0A1B0GRJ4 243 aa1.71□□□□□ -2.14
Vcan-202ENSMUST00000109544 Krtap5-5Q2TA51 241 aa1.71□□□□□ -2.14
Vcan-202ENSMUST00000109544 Krtap5-4Q62220 223 aa1.71□□□□□ -2.14
Vcan-202ENSMUST00000109544 Gm39115A0A1B0GSH7 232 aa1.7□□□□□ -2.14
Vcan-202ENSMUST00000109544 Gm11567Q9D141 195 aa1.7□□□□□ -2.14
Vcan-202ENSMUST00000109544 Krtap6-2O08884 159 aa1.69□□□□□ -2.14
Vcan-202ENSMUST00000109544 Gm10153A0A1B0GRL1 320 aa1.65□□□□□ -2.15
Vcan-202ENSMUST00000109544 Gm45618A0A1B0GSA0 219 aa1.6□□□□□ -2.15
Vcan-202ENSMUST00000109544 Krtap21-1Q925H4 128 aa1.56□□□□□ -2.16
Vcan-202ENSMUST00000109544 Gm29735A0A1B0GT06 219 aa1.26□□□□□ -2.21
Vcan-202ENSMUST00000109544 Krtap5-1Q64507 230 aa1.14□□□□□ -2.23
Vcan-202ENSMUST00000109544 Gm4559A4IF42 199 aa1.01□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 103.1 ms