RNA–Protein interactions for RNA: ENSMUST00000102632.6

Sort1-201, Transcript of Sortilin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sort1, Length 6,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-201ENSMUST00000102632 Herc1E9PZP8 4859 aa5.39□□□□□ -1.55
Sort1-201ENSMUST00000102632 Kmt2cQ8BRH4 4903 aa5.38□□□□□ -1.55
Sort1-201ENSMUST00000102632 Gm11562A0PK51 136 aa5.37□□□□□ -1.55
Sort1-201ENSMUST00000102632 Sprr2bO70554 98 aa5.34□□□□□ -1.55
Sort1-201ENSMUST00000102632 Gm11554B1AQB2 190 aa5.27□□□□□ -1.57
Sort1-201ENSMUST00000102632 Gm11938Q9D3H4 131 aa5.24□□□□□ -1.57
Sort1-201ENSMUST00000102632 Mt3P28184 68 aa5.21□□□□□ -1.58
Sort1-201ENSMUST00000102632 PcloQ9QYX7 5068 aa5.2□□□□□ -1.58
Sort1-201ENSMUST00000102632 Krtap6-3A0A087WQL6 57 aa5.13□□□□□ -1.59
Sort1-201ENSMUST00000102632 Krtap31-1Q9D644 177 aa5.09□□□□□ -1.59
Sort1-201ENSMUST00000102632 Syne2Q6ZWQ0 6874 aaKnown RBP5.06□□□□□ -1.6
Sort1-201ENSMUST00000102632 Fsip2A2ARZ3 6995 aa5.03□□□□□ -1.6
Sort1-201ENSMUST00000102632 HydinQ80W93 5154 aa4.95□□□□□ -1.62
Sort1-201ENSMUST00000102632 Birc6O88738 4882 aa4.92□□□□□ -1.62
Sort1-201ENSMUST00000102632 Kiaa1109A2AAE1 5005 aa4.9□□□□□ -1.63
Sort1-201ENSMUST00000102632 Krtap4-16Q91W93 202 aa4.88□□□□□ -1.63
Sort1-201ENSMUST00000102632 Muc5bE9Q5I3 4800 aa4.84□□□□□ -1.64
Sort1-201ENSMUST00000102632 4932415D10RikA0A1W2P6U8 4986 aa4.76□□□□□ -1.65
Sort1-201ENSMUST00000102632 Mdn1A2ANY6 5589 aaKnown RBP4.76□□□□□ -1.65
Sort1-201ENSMUST00000102632 ZanO88799 5376 aa4.74□□□□□ -1.65
Sort1-201ENSMUST00000102632 Krtap20-2E9Q0A8 60 aa4.73□□□□□ -1.65
Sort1-201ENSMUST00000102632 Krtap31-2Q8CAY5 177 aa4.71□□□□□ -1.65
Sort1-201ENSMUST00000102632 Hmcn2A2AJ76 5100 aa4.65□□□□□ -1.67
Sort1-201ENSMUST00000102632 Fat4Q2PZL6 4981 aa4.59□□□□□ -1.67
Sort1-201ENSMUST00000102632 Abca13Q5SSE9 5034 aa4.53□□□□□ -1.68
Sort1-201ENSMUST00000102632 Ubr4A2AN08 5180 aa4.52□□□□□ -1.69
Sort1-201ENSMUST00000102632 Mt1P02802 61 aaKnown RBP4.49□□□□□ -1.69
Sort1-201ENSMUST00000102632 Syne1Q6ZWR6 8799 aa4.34□□□□□ -1.72
Sort1-201ENSMUST00000102632 Rnf213E9Q555 5152 aaKnown RBP4.24□□□□□ -1.73
Sort1-201ENSMUST00000102632 Gm11555B1AQ89 175 aa4.2□□□□□ -1.74
Sort1-201ENSMUST00000102632 SspoQ8CG65 4998 aa4.13□□□□□ -1.75
Sort1-201ENSMUST00000102632 Ush2AQ2QI47 5193 aa4.11□□□□□ -1.75
Sort1-201ENSMUST00000102632 Eppk1Q8R0W0 6548 aa3.83□□□□□ -1.8
Sort1-201ENSMUST00000102632 NebE9Q1W3 7152 aa3.8□□□□□ -1.8
Sort1-201ENSMUST00000102632 Muc16A0A140LJ72 8478 aa3.7□□□□□ -1.82
Sort1-201ENSMUST00000102632 Macf1Q9QXZ0 7354 aaKnown RBP3.69□□□□□ -1.82
Sort1-201ENSMUST00000102632 ObscnA2AAJ9 8891 aaKnown RBP3.66□□□□□ -1.82
Sort1-201ENSMUST00000102632 Gm11559Q9D3H7 191 aa3.65□□□□□ -1.82
Sort1-201ENSMUST00000102632 1110025L11RikO09048 78 aa3.64□□□□□ -1.83
Sort1-201ENSMUST00000102632 Krtap6-5Q925H3 78 aa3.64□□□□□ -1.83
Sort1-201ENSMUST00000102632 DstQ91ZU6 7393 aaKnown RBP3.61□□□□□ -1.83
Sort1-201ENSMUST00000102632 Gm10229O08631 77 aa3.6□□□□□ -1.83
Sort1-201ENSMUST00000102632 Phgr1Q8K0G7 91 aa3.47□□□□□ -1.85
Sort1-201ENSMUST00000102632 Gm11568A2A4M2 211 aa3.4□□□□□ -1.86
Sort1-201ENSMUST00000102632 Krtap9-1Q64526 186 aa3.4□□□□□ -1.86
Sort1-201ENSMUST00000102632 Kmt2dQ6PDK2 5588 aa3.33□□□□□ -1.88
Sort1-201ENSMUST00000102632 Muc19Q6PZE0 7524 aa3.23□□□□□ -1.89
Sort1-201ENSMUST00000102632 Krtap6-2O08884 159 aa2.83□□□□□ -1.96
Sort1-201ENSMUST00000102632 Gpr98Q8VHN7 6298 aaKnown RBP2.8□□□□□ -1.96
Sort1-201ENSMUST00000102632 Krtap5-2Q9D5Z7 189 aa2.69□□□□□ -1.98
Sort1-201ENSMUST00000102632 Gm11639A0A1D5RLM8 5808 aa2.63□□□□□ -1.99
Sort1-201ENSMUST00000102632 Gm4553A0A1B0GSA9 284 aa2.55□□□□□ -2
Sort1-201ENSMUST00000102632 Gm2431E9Q8S1 172 aa2.54□□□□□ -2
Sort1-201ENSMUST00000102632 Krtap21-1Q925H4 128 aa2.43□□□□□ -2.02
Sort1-201ENSMUST00000102632 Gm11567Q9D141 195 aa2.41□□□□□ -2.02
Sort1-201ENSMUST00000102632 A030005L19RikA0A1Y7VIU2 113 aa2.36□□□□□ -2.03
Sort1-201ENSMUST00000102632 Hmcn1D3YXG0 5634 aa2.25□□□□□ -2.05
Sort1-201ENSMUST00000102632 A0A1Y7VLE6 161 aa2.14□□□□□ -2.07
Sort1-201ENSMUST00000102632 AhnakE9Q616 5656 aaKnown RBP2.1□□□□□ -2.07
Sort1-201ENSMUST00000102632 Gm10153A0A1B0GRL1 320 aa2.09□□□□□ -2.08
Sort1-201ENSMUST00000102632 A030003K21RikA0A1Y7VIM3 128 aa2.02□□□□□ -2.09
Sort1-201ENSMUST00000102632 A0A1Y7VJH8 109 aa1.98□□□□□ -2.09
Sort1-201ENSMUST00000102632 Gm45337A0A1B0GS71 263 aa1.97□□□□□ -2.09
Sort1-201ENSMUST00000102632 Gm6217A0A1Y7VJK9 128 aa1.92□□□□□ -2.1
Sort1-201ENSMUST00000102632 Gm40460A0A1B0GR10 244 aa1.88□□□□□ -2.11
Sort1-201ENSMUST00000102632 Gm7579A0A1B0GRJ4 243 aa1.88□□□□□ -2.11
Sort1-201ENSMUST00000102632 Gm39115A0A1B0GSH7 232 aa1.88□□□□□ -2.11
Sort1-201ENSMUST00000102632 Krtap5-5Q2TA51 241 aa1.88□□□□□ -2.11
Sort1-201ENSMUST00000102632 Krtap5-4Q62220 223 aa1.88□□□□□ -2.11
Sort1-201ENSMUST00000102632 Krtap28-10A0A1Y7VP58 119 aa1.82□□□□□ -2.12
Sort1-201ENSMUST00000102632 A030005K14RikA0A1Y7VNY1 122 aa1.82□□□□□ -2.12
Sort1-201ENSMUST00000102632 Krtap28-13A0A087WQP5 138 aa1.75□□□□□ -2.13
Sort1-201ENSMUST00000102632 Krtap5-1Q64507 230 aa1.72□□□□□ -2.13
Sort1-201ENSMUST00000102632 Gm7544A0A1Y7VJ58 118 aa1.72□□□□□ -2.13
Sort1-201ENSMUST00000102632 A0A1Y7VJ07 166 aa1.71□□□□□ -2.14
Sort1-201ENSMUST00000102632 Gm45618A0A1B0GSA0 219 aa1.58□□□□□ -2.16
Sort1-201ENSMUST00000102632 A030014E15RikA0A1Y7VJV2 120 aa1.55□□□□□ -2.16
Sort1-201ENSMUST00000102632 Gm29735A0A1B0GT06 219 aa1.36□□□□□ -2.19
Sort1-201ENSMUST00000102632 A0A286YCP9 139 aa1.34□□□□□ -2.2
Sort1-201ENSMUST00000102632 Gm4559A4IF42 199 aa0.88□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 11.9 ms