RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 Gm11596B1AQB0 205 aa2.93□□□□□ -1.94
Col6a3-202ENSMUST00000097653 Krtap4-1Q3UUY3 169 aa2.93□□□□□ -1.94
Col6a3-202ENSMUST00000097653 Herc1E9PZP8 4859 aa2.92□□□□□ -1.94
Col6a3-202ENSMUST00000097653 Gm11564A2A4L9 201 aa2.89□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Gm11563B1AQ90 168 aa2.89□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Gm11595B1AQA7 289 aa2.89□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Krtap4-8B1AQA8 209 aa2.89□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Abca13Q5SSE9 5034 aa2.89□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Krtap4-9B1AQA9 244 aa2.88□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Lce1kJ3QP15 125 aa2.88□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Syne1Q6ZWR6 8799 aa2.88□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Krtap4-16Q91W93 202 aa2.86□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Mdn1A2ANY6 5589 aaKnown RBP2.85□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Syne2Q6ZWQ0 6874 aaKnown RBP2.84□□□□□ -1.95
Col6a3-202ENSMUST00000097653 Krtap4-13Q9D7P3 165 aa2.83□□□□□ -1.96
Col6a3-202ENSMUST00000097653 Ubr4A2AN08 5180 aa2.82□□□□□ -1.96
Col6a3-202ENSMUST00000097653 Krtap17-1A2A5X6 109 aa2.81□□□□□ -1.96
Col6a3-202ENSMUST00000097653 Birc6O88738 4882 aa2.81□□□□□ -1.96
Col6a3-202ENSMUST00000097653 Hmcn2A2AJ76 5100 aa2.81□□□□□ -1.96
Col6a3-202ENSMUST00000097653 HydinQ80W93 5154 aa2.76□□□□□ -1.97
Col6a3-202ENSMUST00000097653 Mt1P02802 61 aaKnown RBP2.75□□□□□ -1.97
Col6a3-202ENSMUST00000097653 4932415D10RikA0A1W2P6U8 4986 aa2.73□□□□□ -1.97
Col6a3-202ENSMUST00000097653 Muc5bE9Q5I3 4800 aa2.7□□□□□ -1.98
Col6a3-202ENSMUST00000097653 Fsip2A2ARZ3 6995 aa2.66□□□□□ -1.98
Col6a3-202ENSMUST00000097653 Krtap6-3A0A087WQL6 57 aa2.64□□□□□ -1.99
Col6a3-202ENSMUST00000097653 Gm11554B1AQB2 190 aa2.62□□□□□ -1.99
Col6a3-202ENSMUST00000097653 ObscnA2AAJ9 8891 aaKnown RBP2.61□□□□□ -1.99
Col6a3-202ENSMUST00000097653 Fat4Q2PZL6 4981 aa2.56□□□□□ -2
Col6a3-202ENSMUST00000097653 Rnf213E9Q555 5152 aaKnown RBP2.5□□□□□ -2.01
Col6a3-202ENSMUST00000097653 Ush2AQ2QI47 5193 aa2.48□□□□□ -2.01
Col6a3-202ENSMUST00000097653 SspoQ8CG65 4998 aa2.48□□□□□ -2.01
Col6a3-202ENSMUST00000097653 Krtap20-2E9Q0A8 60 aa2.42□□□□□ -2.02
Col6a3-202ENSMUST00000097653 Muc16A0A140LJ72 8478 aa2.33□□□□□ -2.04
Col6a3-202ENSMUST00000097653 1110025L11RikO09048 78 aa2.21□□□□□ -2.06
Col6a3-202ENSMUST00000097653 Krtap6-5Q925H3 78 aa2.21□□□□□ -2.06
Col6a3-202ENSMUST00000097653 Gm11555B1AQ89 175 aa2.14□□□□□ -2.07
Col6a3-202ENSMUST00000097653 Gm10229O08631 77 aa2.11□□□□□ -2.07
Col6a3-202ENSMUST00000097653 Kmt2dQ6PDK2 5588 aa2.05□□□□□ -2.08
Col6a3-202ENSMUST00000097653 Eppk1Q8R0W0 6548 aa2.05□□□□□ -2.08
Col6a3-202ENSMUST00000097653 Macf1Q9QXZ0 7354 aaKnown RBP2.05□□□□□ -2.08
Col6a3-202ENSMUST00000097653 Phgr1Q8K0G7 91 aa2.04□□□□□ -2.08
Col6a3-202ENSMUST00000097653 Muc19Q6PZE0 7524 aa2.03□□□□□ -2.08
Col6a3-202ENSMUST00000097653 DstQ91ZU6 7393 aaKnown RBP1.96□□□□□ -2.1
Col6a3-202ENSMUST00000097653 Gm11568A2A4M2 211 aa1.96□□□□□ -2.1
Col6a3-202ENSMUST00000097653 Krtap9-1Q64526 186 aa1.96□□□□□ -2.1
Col6a3-202ENSMUST00000097653 NebE9Q1W3 7152 aa1.94□□□□□ -2.1
Col6a3-202ENSMUST00000097653 Gm11559Q9D3H7 191 aa1.92□□□□□ -2.1
Col6a3-202ENSMUST00000097653 Gm11567Q9D141 195 aa1.88□□□□□ -2.11
Col6a3-202ENSMUST00000097653 Krtap5-2Q9D5Z7 189 aa1.76□□□□□ -2.13
Col6a3-202ENSMUST00000097653 Gm11639A0A1D5RLM8 5808 aa1.69□□□□□ -2.14
Col6a3-202ENSMUST00000097653 Krtap6-2O08884 159 aa1.67□□□□□ -2.14
Col6a3-202ENSMUST00000097653 Gpr98Q8VHN7 6298 aaKnown RBP1.67□□□□□ -2.14
Col6a3-202ENSMUST00000097653 Hmcn1D3YXG0 5634 aa1.64□□□□□ -2.15
Col6a3-202ENSMUST00000097653 Gm4553A0A1B0GSA9 284 aa1.61□□□□□ -2.15
Col6a3-202ENSMUST00000097653 Krtap21-1Q925H4 128 aa1.56□□□□□ -2.16
Col6a3-202ENSMUST00000097653 Gm10153A0A1B0GRL1 320 aa1.53□□□□□ -2.16
Col6a3-202ENSMUST00000097653 Gm2431E9Q8S1 172 aa1.48□□□□□ -2.17
Col6a3-202ENSMUST00000097653 A0A1Y7VLE6 161 aa1.48□□□□□ -2.17
Col6a3-202ENSMUST00000097653 A030003K21RikA0A1Y7VIM3 128 aa1.43□□□□□ -2.18
Col6a3-202ENSMUST00000097653 A030005L19RikA0A1Y7VIU2 113 aa1.41□□□□□ -2.18
Col6a3-202ENSMUST00000097653 Gm45337A0A1B0GS71 263 aa1.4□□□□□ -2.19
Col6a3-202ENSMUST00000097653 A030005K14RikA0A1Y7VNY1 122 aa1.35□□□□□ -2.19
Col6a3-202ENSMUST00000097653 Gm40460A0A1B0GR10 244 aa1.34□□□□□ -2.2
Col6a3-202ENSMUST00000097653 Gm7579A0A1B0GRJ4 243 aa1.34□□□□□ -2.2
Col6a3-202ENSMUST00000097653 Krtap5-5Q2TA51 241 aa1.34□□□□□ -2.2
Col6a3-202ENSMUST00000097653 Krtap5-4Q62220 223 aa1.34□□□□□ -2.2
Col6a3-202ENSMUST00000097653 Gm39115A0A1B0GSH7 232 aa1.32□□□□□ -2.2
Col6a3-202ENSMUST00000097653 Gm6217A0A1Y7VJK9 128 aa1.32□□□□□ -2.2
Col6a3-202ENSMUST00000097653 Krtap28-10A0A1Y7VP58 119 aa1.31□□□□□ -2.2
Col6a3-202ENSMUST00000097653 A0A1Y7VJ07 166 aa1.3□□□□□ -2.2
Col6a3-202ENSMUST00000097653 AhnakE9Q616 5656 aaKnown RBP1.27□□□□□ -2.21
Col6a3-202ENSMUST00000097653 Krtap28-13A0A087WQP5 138 aa1.2□□□□□ -2.22
Col6a3-202ENSMUST00000097653 Gm7544A0A1Y7VJ58 118 aa1.19□□□□□ -2.22
Col6a3-202ENSMUST00000097653 A0A1Y7VJH8 109 aa1.16□□□□□ -2.22
Col6a3-202ENSMUST00000097653 A030014E15RikA0A1Y7VJV2 120 aa1.11□□□□□ -2.23
Col6a3-202ENSMUST00000097653 Gm29735A0A1B0GT06 219 aa1.05□□□□□ -2.24
Col6a3-202ENSMUST00000097653 Gm45618A0A1B0GSA0 219 aa1.03□□□□□ -2.25
Col6a3-202ENSMUST00000097653 A0A286YCP9 139 aa0.96□□□□□ -2.26
Col6a3-202ENSMUST00000097653 Krtap5-1Q64507 230 aa0.83□□□□□ -2.28
Col6a3-202ENSMUST00000097653 Gm4559A4IF42 199 aa0.49□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 8.4 ms