RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Krtap4-7Q9D732 168 aa4.38□□□□□ -1.71
Chd3-201ENSMUST00000092971 Gm11562A0PK51 136 aa4.37□□□□□ -1.71
Chd3-201ENSMUST00000092971 Pkhd1l1Q80ZA4 4249 aa4.35□□□□□ -1.71
Chd3-201ENSMUST00000092971 Krtap4-9B1AQA9 244 aa4.32□□□□□ -1.72
Chd3-201ENSMUST00000092971 Lce1kJ3QP15 125 aa4.32□□□□□ -1.72
Chd3-201ENSMUST00000092971 Gm11564A2A4L9 201 aa4.3□□□□□ -1.72
Chd3-201ENSMUST00000092971 Gm11563B1AQ90 168 aa4.3□□□□□ -1.72
Chd3-201ENSMUST00000092971 Gm11595B1AQA7 289 aa4.3□□□□□ -1.72
Chd3-201ENSMUST00000092971 Krtap4-8B1AQA8 209 aa4.3□□□□□ -1.72
Chd3-201ENSMUST00000092971 Krtap4-13Q9D7P3 165 aa4.28□□□□□ -1.72
Chd3-201ENSMUST00000092971 Gm11596B1AQB0 205 aa4.28□□□□□ -1.73
Chd3-201ENSMUST00000092971 Lce1a1Q9CQH5 143 aa4.27□□□□□ -1.73
Chd3-201ENSMUST00000092971 Gm11938Q9D3H4 131 aa4.25□□□□□ -1.73
Chd3-201ENSMUST00000092971 Fsip2A2ARZ3 6995 aa4.25□□□□□ -1.73
Chd3-201ENSMUST00000092971 Abca13Q5SSE9 5034 aa4.24□□□□□ -1.73
Chd3-201ENSMUST00000092971 Muc16A0A140LJ72 8478 aa4.22□□□□□ -1.73
Chd3-201ENSMUST00000092971 Sprr2bO70554 98 aa4.21□□□□□ -1.74
Chd3-201ENSMUST00000092971 Hmcn2A2AJ76 5100 aa4.19□□□□□ -1.74
Chd3-201ENSMUST00000092971 4932415D10RikA0A1W2P6U8 4986 aa4.18□□□□□ -1.74
Chd3-201ENSMUST00000092971 Syne2Q6ZWQ0 6874 aaKnown RBP4.18□□□□□ -1.74
Chd3-201ENSMUST00000092971 Fat4Q2PZL6 4981 aa4.17□□□□□ -1.74
Chd3-201ENSMUST00000092971 Mt3P28184 68 aa4.14□□□□□ -1.75
Chd3-201ENSMUST00000092971 ZanO88799 5376 aa4.06□□□□□ -1.76
Chd3-201ENSMUST00000092971 Rnf213E9Q555 5152 aaKnown RBP4.05□□□□□ -1.76
Chd3-201ENSMUST00000092971 Muc5bE9Q5I3 4800 aa3.99□□□□□ -1.77
Chd3-201ENSMUST00000092971 Gm11554B1AQB2 190 aa3.98□□□□□ -1.77
Chd3-201ENSMUST00000092971 Krtap31-2Q8CAY5 177 aa3.85□□□□□ -1.79
Chd3-201ENSMUST00000092971 ObscnA2AAJ9 8891 aaKnown RBP3.8□□□□□ -1.8
Chd3-201ENSMUST00000092971 Ush2AQ2QI47 5193 aa3.8□□□□□ -1.8
Chd3-201ENSMUST00000092971 Krtap6-3A0A087WQL6 57 aa3.62□□□□□ -1.83
Chd3-201ENSMUST00000092971 Krtap20-2E9Q0A8 60 aa3.62□□□□□ -1.83
Chd3-201ENSMUST00000092971 Mt1P02802 61 aaKnown RBP3.62□□□□□ -1.83
Chd3-201ENSMUST00000092971 SspoQ8CG65 4998 aa3.6□□□□□ -1.83
Chd3-201ENSMUST00000092971 Macf1Q9QXZ0 7354 aaKnown RBP3.59□□□□□ -1.83
Chd3-201ENSMUST00000092971 NebE9Q1W3 7152 aa3.41□□□□□ -1.86
Chd3-201ENSMUST00000092971 Muc19Q6PZE0 7524 aa3.34□□□□□ -1.87
Chd3-201ENSMUST00000092971 DstQ91ZU6 7393 aaKnown RBP3.3□□□□□ -1.88
Chd3-201ENSMUST00000092971 Kmt2dQ6PDK2 5588 aa3.24□□□□□ -1.89
Chd3-201ENSMUST00000092971 1110025L11RikO09048 78 aa3.05□□□□□ -1.92
Chd3-201ENSMUST00000092971 Krtap6-5Q925H3 78 aa3.05□□□□□ -1.92
Chd3-201ENSMUST00000092971 Gm11555B1AQ89 175 aa3□□□□□ -1.93
Chd3-201ENSMUST00000092971 Phgr1Q8K0G7 91 aa2.99□□□□□ -1.93
Chd3-201ENSMUST00000092971 Gm10229O08631 77 aa2.96□□□□□ -1.94
Chd3-201ENSMUST00000092971 Eppk1Q8R0W0 6548 aa2.89□□□□□ -1.95
Chd3-201ENSMUST00000092971 Gm11568A2A4M2 211 aa2.7□□□□□ -1.98
Chd3-201ENSMUST00000092971 Krtap9-1Q64526 186 aa2.7□□□□□ -1.98
Chd3-201ENSMUST00000092971 Gm11559Q9D3H7 191 aa2.65□□□□□ -1.98
Chd3-201ENSMUST00000092971 Gm11639A0A1D5RLM8 5808 aa2.53□□□□□ -2
Chd3-201ENSMUST00000092971 Gm11567Q9D141 195 aa2.48□□□□□ -2.01
Chd3-201ENSMUST00000092971 Gpr98Q8VHN7 6298 aaKnown RBP2.43□□□□□ -2.02
Chd3-201ENSMUST00000092971 Hmcn1D3YXG0 5634 aa2.35□□□□□ -2.03
Chd3-201ENSMUST00000092971 Krtap6-2O08884 159 aa2.33□□□□□ -2.04
Chd3-201ENSMUST00000092971 Krtap5-2Q9D5Z7 189 aa2.26□□□□□ -2.05
Chd3-201ENSMUST00000092971 Gm4553A0A1B0GSA9 284 aa2.12□□□□□ -2.07
Chd3-201ENSMUST00000092971 Krtap21-1Q925H4 128 aa2.09□□□□□ -2.07
Chd3-201ENSMUST00000092971 AhnakE9Q616 5656 aaKnown RBP2□□□□□ -2.09
Chd3-201ENSMUST00000092971 Gm2431E9Q8S1 172 aa1.94□□□□□ -2.1
Chd3-201ENSMUST00000092971 Gm10153A0A1B0GRL1 320 aa1.93□□□□□ -2.1
Chd3-201ENSMUST00000092971 A030005L19RikA0A1Y7VIU2 113 aa1.89□□□□□ -2.11
Chd3-201ENSMUST00000092971 A0A1Y7VJH8 109 aa1.88□□□□□ -2.11
Chd3-201ENSMUST00000092971 Gm40460A0A1B0GR10 244 aa1.87□□□□□ -2.11
Chd3-201ENSMUST00000092971 Gm7579A0A1B0GRJ4 243 aa1.87□□□□□ -2.11
Chd3-201ENSMUST00000092971 Krtap5-5Q2TA51 241 aa1.87□□□□□ -2.11
Chd3-201ENSMUST00000092971 Krtap5-4Q62220 223 aa1.87□□□□□ -2.11
Chd3-201ENSMUST00000092971 Gm45337A0A1B0GS71 263 aa1.86□□□□□ -2.11
Chd3-201ENSMUST00000092971 Gm39115A0A1B0GSH7 232 aa1.69□□□□□ -2.14
Chd3-201ENSMUST00000092971 A0A1Y7VLE6 161 aa1.69□□□□□ -2.14
Chd3-201ENSMUST00000092971 Gm29735A0A1B0GT06 219 aa1.44□□□□□ -2.18
Chd3-201ENSMUST00000092971 Gm45618A0A1B0GSA0 219 aa1.42□□□□□ -2.18
Chd3-201ENSMUST00000092971 A0A1Y7VJ07 166 aa1.33□□□□□ -2.2
Chd3-201ENSMUST00000092971 Krtap28-10A0A1Y7VP58 119 aa1.23□□□□□ -2.21
Chd3-201ENSMUST00000092971 A0A286YCP9 139 aa1.22□□□□□ -2.21
Chd3-201ENSMUST00000092971 Krtap5-1Q64507 230 aa1.12□□□□□ -2.23
Chd3-201ENSMUST00000092971 A030005K14RikA0A1Y7VNY1 122 aa1.01□□□□□ -2.25
Chd3-201ENSMUST00000092971 A030014E15RikA0A1Y7VJV2 120 aa1□□□□□ -2.25
Chd3-201ENSMUST00000092971 Krtap28-13A0A087WQP5 138 aa0.9□□□□□ -2.26
Chd3-201ENSMUST00000092971 A030003K21RikA0A1Y7VIM3 128 aa0.87□□□□□ -2.27
Chd3-201ENSMUST00000092971 Gm7544A0A1Y7VJ58 118 aa0.85□□□□□ -2.27
Chd3-201ENSMUST00000092971 Gm4559A4IF42 199 aa0.73□□□□□ -2.29
Chd3-201ENSMUST00000092971 Gm6217A0A1Y7VJK9 128 aa0.7□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 61.9 ms