RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Lce1hQ9D6R3 140 aa2.13□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Sprr2fO70557 76 aa2.12□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Ush2AQ2QI47 5193 aa2.12□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Lce1eQ9D139 143 aa2.11□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Sprr2eO70556 76 aa2.1□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Mt3P28184 68 aa2.1□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Lce1bQ9D149 137 aa2.1□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Gm10061D3Z714 54 aa2.09□□□□□ -2.08
Scn1a-201ENSMUST00000077489 Krtap4-2B1AQ85 167 aa2.06□□□□□ -2.08
Scn1a-201ENSMUST00000077489 Gm11569B1AQB1 180 aa2.04□□□□□ -2.08
Scn1a-201ENSMUST00000077489 Sprr2hO70559 108 aa2.04□□□□□ -2.08
Scn1a-201ENSMUST00000077489 Sprr2dO70555 85 aa2.02□□□□□ -2.09
Scn1a-201ENSMUST00000077489 A0A286YCP9 139 aa2.01□□□□□ -2.09
Scn1a-201ENSMUST00000077489 4932415D10RikA0A1W2P6U8 4986 aa1.98□□□□□ -2.09
Scn1a-201ENSMUST00000077489 Krtap17-1A2A5X6 109 aa1.98□□□□□ -2.09
Scn1a-201ENSMUST00000077489 Gm11938Q9D3H4 131 aa1.95□□□□□ -2.1
Scn1a-201ENSMUST00000077489 Lce1a2Q9D1K4 149 aa1.94□□□□□ -2.1
Scn1a-201ENSMUST00000077489 Gm11562A0PK51 136 aa1.92□□□□□ -2.1
Scn1a-201ENSMUST00000077489 Rnf213E9Q555 5152 aaKnown RBP1.92□□□□□ -2.1
Scn1a-201ENSMUST00000077489 Mt4P47945 62 aa1.92□□□□□ -2.1
Scn1a-201ENSMUST00000077489 Syne1Q6ZWR6 8799 aa1.91□□□□□ -2.1
Scn1a-201ENSMUST00000077489 Fat4Q2PZL6 4981 aa1.9□□□□□ -2.11
Scn1a-201ENSMUST00000077489 Muc5bE9Q5I3 4800 aa1.87□□□□□ -2.11
Scn1a-201ENSMUST00000077489 ZanO88799 5376 aa1.87□□□□□ -2.11
Scn1a-201ENSMUST00000077489 Krtap4-6Q3V4B7 195 aa1.85□□□□□ -2.11
Scn1a-201ENSMUST00000077489 Gm11596B1AQB0 205 aa1.79□□□□□ -2.12
Scn1a-201ENSMUST00000077489 2300003K06RikA2A4M0 262 aa1.78□□□□□ -2.12
Scn1a-201ENSMUST00000077489 Gm11564A2A4L9 201 aa1.77□□□□□ -2.13
Scn1a-201ENSMUST00000077489 Gm11595B1AQA7 289 aa1.77□□□□□ -2.13
Scn1a-201ENSMUST00000077489 Krtap4-8B1AQA8 209 aa1.77□□□□□ -2.13
Scn1a-201ENSMUST00000077489 Mt1P02802 61 aaKnown RBP1.76□□□□□ -2.13
Scn1a-201ENSMUST00000077489 Lce1kJ3QP15 125 aa1.75□□□□□ -2.13
Scn1a-201ENSMUST00000077489 Sprr2bO70554 98 aa1.74□□□□□ -2.13
Scn1a-201ENSMUST00000077489 SspoQ8CG65 4998 aa1.72□□□□□ -2.13
Scn1a-201ENSMUST00000077489 Krtap4-9B1AQA9 244 aa1.71□□□□□ -2.14
Scn1a-201ENSMUST00000077489 Krtap6-3A0A087WQL6 57 aa1.69□□□□□ -2.14
Scn1a-201ENSMUST00000077489 Krtap4-13Q9D7P3 165 aa1.66□□□□□ -2.14
Scn1a-201ENSMUST00000077489 Krtap4-16Q91W93 202 aa1.65□□□□□ -2.15
Scn1a-201ENSMUST00000077489 Mdn1A2ANY6 5589 aaKnown RBP1.59□□□□□ -2.15
Scn1a-201ENSMUST00000077489 ObscnA2AAJ9 8891 aaKnown RBP1.59□□□□□ -2.16
Scn1a-201ENSMUST00000077489 Lce1a1Q9CQH5 143 aa1.59□□□□□ -2.16
Scn1a-201ENSMUST00000077489 Syne2Q6ZWQ0 6874 aaKnown RBP1.54□□□□□ -2.16
Scn1a-201ENSMUST00000077489 Muc16A0A140LJ72 8478 aa1.51□□□□□ -2.17
Scn1a-201ENSMUST00000077489 Gm11554B1AQB2 190 aa1.48□□□□□ -2.17
Scn1a-201ENSMUST00000077489 Krtap20-2E9Q0A8 60 aa1.47□□□□□ -2.17
Scn1a-201ENSMUST00000077489 Eppk1Q8R0W0 6548 aa1.42□□□□□ -2.18
Scn1a-201ENSMUST00000077489 1110025L11RikO09048 78 aa1.4□□□□□ -2.18
Scn1a-201ENSMUST00000077489 Krtap6-5Q925H3 78 aa1.4□□□□□ -2.18
Scn1a-201ENSMUST00000077489 Fsip2A2ARZ3 6995 aa1.36□□□□□ -2.19
Scn1a-201ENSMUST00000077489 Gm11568A2A4M2 211 aa1.35□□□□□ -2.19
Scn1a-201ENSMUST00000077489 Kmt2dQ6PDK2 5588 aa1.34□□□□□ -2.2
Scn1a-201ENSMUST00000077489 Gm10229O08631 77 aa1.34□□□□□ -2.2
Scn1a-201ENSMUST00000077489 Gm11639A0A1D5RLM8 5808 aa1.28□□□□□ -2.2
Scn1a-201ENSMUST00000077489 Gm11559Q9D3H7 191 aa1.25□□□□□ -2.21
Scn1a-201ENSMUST00000077489 Muc19Q6PZE0 7524 aa1.25□□□□□ -2.21
Scn1a-201ENSMUST00000077489 Krtap9-1Q64526 186 aa1.25□□□□□ -2.21
Scn1a-201ENSMUST00000077489 Gm11567Q9D141 195 aa1.23□□□□□ -2.21
Scn1a-201ENSMUST00000077489 Krtap5-2Q9D5Z7 189 aa1.22□□□□□ -2.21
Scn1a-201ENSMUST00000077489 Phgr1Q8K0G7 91 aa1.22□□□□□ -2.21
Scn1a-201ENSMUST00000077489 Gm2431E9Q8S1 172 aa1.21□□□□□ -2.22
Scn1a-201ENSMUST00000077489 Gm45618A0A1B0GSA0 219 aa1.2□□□□□ -2.22
Scn1a-201ENSMUST00000077489 Gm45337A0A1B0GS71 263 aa1.19□□□□□ -2.22
Scn1a-201ENSMUST00000077489 Gm4553A0A1B0GSA9 284 aa1.18□□□□□ -2.22
Scn1a-201ENSMUST00000077489 Macf1Q9QXZ0 7354 aaKnown RBP1.17□□□□□ -2.22
Scn1a-201ENSMUST00000077489 Gpr98Q8VHN7 6298 aaKnown RBP1.17□□□□□ -2.22
Scn1a-201ENSMUST00000077489 Gm39115A0A1B0GSH7 232 aa1.15□□□□□ -2.23
Scn1a-201ENSMUST00000077489 Hmcn1D3YXG0 5634 aa1.14□□□□□ -2.23
Scn1a-201ENSMUST00000077489 Gm40460A0A1B0GR10 244 aa1.14□□□□□ -2.23
Scn1a-201ENSMUST00000077489 Gm7579A0A1B0GRJ4 243 aa1.14□□□□□ -2.23
Scn1a-201ENSMUST00000077489 Krtap5-5Q2TA51 241 aa1.14□□□□□ -2.23
Scn1a-201ENSMUST00000077489 Krtap5-4Q62220 223 aa1.14□□□□□ -2.23
Scn1a-201ENSMUST00000077489 Gm10153A0A1B0GRL1 320 aa1.12□□□□□ -2.23
Scn1a-201ENSMUST00000077489 AhnakE9Q616 5656 aaKnown RBP1.09□□□□□ -2.24
Scn1a-201ENSMUST00000077489 DstQ91ZU6 7393 aaKnown RBP1.08□□□□□ -2.24
Scn1a-201ENSMUST00000077489 Gm29735A0A1B0GT06 219 aa1.07□□□□□ -2.24
Scn1a-201ENSMUST00000077489 Krtap6-2O08884 159 aa1.04□□□□□ -2.24
Scn1a-201ENSMUST00000077489 NebE9Q1W3 7152 aa1□□□□□ -2.25
Scn1a-201ENSMUST00000077489 Krtap21-1Q925H4 128 aa0.99□□□□□ -2.25
Scn1a-201ENSMUST00000077489 Krtap5-1Q64507 230 aa0.95□□□□□ -2.26
Scn1a-201ENSMUST00000077489 Gm4559A4IF42 199 aa0.82□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 123.2 ms