RNA–Protein interactions for RNA: ENSMUST00000073043.4

Cxcl12-201, Transcript of Stromal cell-derived factor 1, mousemouse

TSL 1 (best) BASIC

Gene Cxcl12, Length 5,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12-201ENSMUST00000073043 Gm11564A2A4L9 201 aa3.23□□□□□ -1.89
Cxcl12-201ENSMUST00000073043 Gm11563B1AQ90 168 aa3.23□□□□□ -1.89
Cxcl12-201ENSMUST00000073043 Gm11595B1AQA7 289 aa3.23□□□□□ -1.89
Cxcl12-201ENSMUST00000073043 Krtap4-8B1AQA8 209 aa3.23□□□□□ -1.89
Cxcl12-201ENSMUST00000073043 Muc5bE9Q5I3 4800 aa3.22□□□□□ -1.89
Cxcl12-201ENSMUST00000073043 Eppk1Q8R0W0 6548 aa3.22□□□□□ -1.89
Cxcl12-201ENSMUST00000073043 Hmcn2A2AJ76 5100 aa3.21□□□□□ -1.9
Cxcl12-201ENSMUST00000073043 Gm10024A0A0A0MQA4 119 aa3.21□□□□□ -1.9
Cxcl12-201ENSMUST00000073043 Sprr2eO70556 76 aa3.19□□□□□ -1.9
Cxcl12-201ENSMUST00000073043 Rnf213E9Q555 5152 aaKnown RBP3.16□□□□□ -1.9
Cxcl12-201ENSMUST00000073043 Krtap4-9B1AQA9 244 aa3.15□□□□□ -1.9
Cxcl12-201ENSMUST00000073043 Krtap6-3A0A087WQL6 57 aa3.14□□□□□ -1.91
Cxcl12-201ENSMUST00000073043 2300003K06RikA2A4M0 262 aa3.1□□□□□ -1.91
Cxcl12-201ENSMUST00000073043 Krtap4-7Q9D732 168 aa3.08□□□□□ -1.92
Cxcl12-201ENSMUST00000073043 Sprr2dO70555 85 aa3.04□□□□□ -1.92
Cxcl12-201ENSMUST00000073043 Krtap4-13Q9D7P3 165 aa3.04□□□□□ -1.92
Cxcl12-201ENSMUST00000073043 Syne2Q6ZWQ0 6874 aaKnown RBP3.03□□□□□ -1.92
Cxcl12-201ENSMUST00000073043 SspoQ8CG65 4998 aa3□□□□□ -1.93
Cxcl12-201ENSMUST00000073043 Gm11938Q9D3H4 131 aa2.99□□□□□ -1.93
Cxcl12-201ENSMUST00000073043 Lce1kJ3QP15 125 aa2.98□□□□□ -1.93
Cxcl12-201ENSMUST00000073043 Fsip2A2ARZ3 6995 aa2.97□□□□□ -1.93
Cxcl12-201ENSMUST00000073043 Gm11555B1AQ89 175 aa2.95□□□□□ -1.94
Cxcl12-201ENSMUST00000073043 Syne1Q6ZWR6 8799 aa2.95□□□□□ -1.94
Cxcl12-201ENSMUST00000073043 Sprr2hO70559 108 aa2.93□□□□□ -1.94
Cxcl12-201ENSMUST00000073043 Lce1a1Q9CQH5 143 aa2.9□□□□□ -1.95
Cxcl12-201ENSMUST00000073043 Krtap31-1Q9D644 177 aa2.89□□□□□ -1.95
Cxcl12-201ENSMUST00000073043 Mt3P28184 68 aa2.84□□□□□ -1.96
Cxcl12-201ENSMUST00000073043 Krtap20-2E9Q0A8 60 aa2.83□□□□□ -1.96
Cxcl12-201ENSMUST00000073043 Krtap31-2Q8CAY5 177 aa2.77□□□□□ -1.97
Cxcl12-201ENSMUST00000073043 Mt1P02802 61 aaKnown RBP2.7□□□□□ -1.98
Cxcl12-201ENSMUST00000073043 Gm11554B1AQB2 190 aa2.67□□□□□ -1.98
Cxcl12-201ENSMUST00000073043 Krtap4-16Q91W93 202 aa2.64□□□□□ -1.99
Cxcl12-201ENSMUST00000073043 Gpr98Q8VHN7 6298 aaKnown RBP2.6□□□□□ -1.99
Cxcl12-201ENSMUST00000073043 ObscnA2AAJ9 8891 aaKnown RBP2.52□□□□□ -2.01
Cxcl12-201ENSMUST00000073043 Muc16A0A140LJ72 8478 aa2.5□□□□□ -2.01
Cxcl12-201ENSMUST00000073043 A030005L19RikA0A1Y7VIU2 113 aa2.43□□□□□ -2.02
Cxcl12-201ENSMUST00000073043 Macf1Q9QXZ0 7354 aaKnown RBP2.38□□□□□ -2.03
Cxcl12-201ENSMUST00000073043 Gm11559Q9D3H7 191 aa2.36□□□□□ -2.03
Cxcl12-201ENSMUST00000073043 Sprr2bO70554 98 aa2.35□□□□□ -2.03
Cxcl12-201ENSMUST00000073043 Gm11639A0A1D5RLM8 5808 aa2.35□□□□□ -2.03
Cxcl12-201ENSMUST00000073043 Kmt2dQ6PDK2 5588 aa2.34□□□□□ -2.04
Cxcl12-201ENSMUST00000073043 DstQ91ZU6 7393 aaKnown RBP2.32□□□□□ -2.04
Cxcl12-201ENSMUST00000073043 Krtap5-2Q9D5Z7 189 aa2.25□□□□□ -2.05
Cxcl12-201ENSMUST00000073043 NebE9Q1W3 7152 aa2.24□□□□□ -2.05
Cxcl12-201ENSMUST00000073043 Gm11568A2A4M2 211 aa2.23□□□□□ -2.05
Cxcl12-201ENSMUST00000073043 Krtap9-1Q64526 186 aa2.23□□□□□ -2.05
Cxcl12-201ENSMUST00000073043 Gm4553A0A1B0GSA9 284 aa2.23□□□□□ -2.05
Cxcl12-201ENSMUST00000073043 Hmcn1D3YXG0 5634 aa2.2□□□□□ -2.06
Cxcl12-201ENSMUST00000073043 1110025L11RikO09048 78 aa2.19□□□□□ -2.06
Cxcl12-201ENSMUST00000073043 Krtap6-5Q925H3 78 aa2.19□□□□□ -2.06
Cxcl12-201ENSMUST00000073043 Muc19Q6PZE0 7524 aa2.1□□□□□ -2.07
Cxcl12-201ENSMUST00000073043 Gm10229O08631 77 aa2.05□□□□□ -2.08
Cxcl12-201ENSMUST00000073043 Gm45337A0A1B0GS71 263 aa2.02□□□□□ -2.09
Cxcl12-201ENSMUST00000073043 Gm40460A0A1B0GR10 244 aa2.02□□□□□ -2.09
Cxcl12-201ENSMUST00000073043 Gm7579A0A1B0GRJ4 243 aa2.02□□□□□ -2.09
Cxcl12-201ENSMUST00000073043 Krtap5-5Q2TA51 241 aa2.02□□□□□ -2.09
Cxcl12-201ENSMUST00000073043 Krtap5-4Q62220 223 aa2.02□□□□□ -2.09
Cxcl12-201ENSMUST00000073043 Gm39115A0A1B0GSH7 232 aa2□□□□□ -2.09
Cxcl12-201ENSMUST00000073043 A0A1Y7VLE6 161 aa1.98□□□□□ -2.09
Cxcl12-201ENSMUST00000073043 Gm2431E9Q8S1 172 aa1.98□□□□□ -2.09
Cxcl12-201ENSMUST00000073043 Gm45618A0A1B0GSA0 219 aa1.96□□□□□ -2.1
Cxcl12-201ENSMUST00000073043 A0A1Y7VJH8 109 aa1.89□□□□□ -2.11
Cxcl12-201ENSMUST00000073043 AhnakE9Q616 5656 aaKnown RBP1.85□□□□□ -2.11
Cxcl12-201ENSMUST00000073043 Phgr1Q8K0G7 91 aa1.85□□□□□ -2.11
Cxcl12-201ENSMUST00000073043 A030003K21RikA0A1Y7VIM3 128 aa1.84□□□□□ -2.12
Cxcl12-201ENSMUST00000073043 Gm10153A0A1B0GRL1 320 aa1.82□□□□□ -2.12
Cxcl12-201ENSMUST00000073043 Gm6217A0A1Y7VJK9 128 aa1.73□□□□□ -2.13
Cxcl12-201ENSMUST00000073043 A0A1Y7VJ07 166 aa1.68□□□□□ -2.14
Cxcl12-201ENSMUST00000073043 Krtap6-2O08884 159 aa1.67□□□□□ -2.14
Cxcl12-201ENSMUST00000073043 Gm11567Q9D141 195 aa1.66□□□□□ -2.14
Cxcl12-201ENSMUST00000073043 Krtap28-10A0A1Y7VP58 119 aa1.65□□□□□ -2.15
Cxcl12-201ENSMUST00000073043 Krtap28-13A0A087WQP5 138 aa1.64□□□□□ -2.15
Cxcl12-201ENSMUST00000073043 A030005K14RikA0A1Y7VNY1 122 aa1.63□□□□□ -2.15
Cxcl12-201ENSMUST00000073043 Gm7544A0A1Y7VJ58 118 aa1.63□□□□□ -2.15
Cxcl12-201ENSMUST00000073043 Krtap21-1Q925H4 128 aa1.59□□□□□ -2.15
Cxcl12-201ENSMUST00000073043 A030014E15RikA0A1Y7VJV2 120 aa1.53□□□□□ -2.16
Cxcl12-201ENSMUST00000073043 Gm29735A0A1B0GT06 219 aa1.51□□□□□ -2.17
Cxcl12-201ENSMUST00000073043 A0A286YCP9 139 aa1.29□□□□□ -2.2
Cxcl12-201ENSMUST00000073043 Krtap5-1Q64507 230 aa1.14□□□□□ -2.23
Cxcl12-201ENSMUST00000073043 Gm4559A4IF42 199 aa0.86□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 47.5 ms