RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Sprr2hO70559 108 aa2.89□□□□□ -1.95
Syne1-201ENSMUST00000041639 Sprr2dO70555 85 aa2.88□□□□□ -1.95
Syne1-201ENSMUST00000041639 A0A1Y7VJH8 109 aa2.88□□□□□ -1.95
Syne1-201ENSMUST00000041639 Gm11938Q9D3H4 131 aa2.87□□□□□ -1.95
Syne1-201ENSMUST00000041639 Krtap4-1Q3UUY3 169 aa2.86□□□□□ -1.95
Syne1-201ENSMUST00000041639 Hmcn2A2AJ76 5100 aa2.86□□□□□ -1.95
Syne1-201ENSMUST00000041639 Gm11562A0PK51 136 aa2.85□□□□□ -1.95
Syne1-201ENSMUST00000041639 2300003K06RikA2A4M0 262 aa2.84□□□□□ -1.95
Syne1-201ENSMUST00000041639 ZanO88799 5376 aa2.83□□□□□ -1.96
Syne1-201ENSMUST00000041639 Muc16A0A140LJ72 8478 aa2.83□□□□□ -1.96
Syne1-201ENSMUST00000041639 Krtap4-9B1AQA9 244 aa2.82□□□□□ -1.96
Syne1-201ENSMUST00000041639 Gm6217A0A1Y7VJK9 128 aa2.8□□□□□ -1.96
Syne1-201ENSMUST00000041639 Krtap4-7Q9D732 168 aa2.8□□□□□ -1.96
Syne1-201ENSMUST00000041639 Gm11564A2A4L9 201 aa2.8□□□□□ -1.96
Syne1-201ENSMUST00000041639 Gm11563B1AQ90 168 aa2.8□□□□□ -1.96
Syne1-201ENSMUST00000041639 Gm11595B1AQA7 289 aa2.8□□□□□ -1.96
Syne1-201ENSMUST00000041639 Krtap4-8B1AQA8 209 aa2.8□□□□□ -1.96
Syne1-201ENSMUST00000041639 Fat4Q2PZL6 4981 aa2.79□□□□□ -1.96
Syne1-201ENSMUST00000041639 Gm11596B1AQB0 205 aa2.78□□□□□ -1.96
Syne1-201ENSMUST00000041639 Lce1kJ3QP15 125 aa2.78□□□□□ -1.96
Syne1-201ENSMUST00000041639 Fsip2A2ARZ3 6995 aa2.77□□□□□ -1.97
Syne1-201ENSMUST00000041639 Krtap4-16Q91W93 202 aa2.77□□□□□ -1.97
Syne1-201ENSMUST00000041639 Krtap28-13A0A087WQP5 138 aa2.76□□□□□ -1.97
Syne1-201ENSMUST00000041639 Krtap4-13Q9D7P3 165 aa2.75□□□□□ -1.97
Syne1-201ENSMUST00000041639 Gm7544A0A1Y7VJ58 118 aa2.74□□□□□ -1.97
Syne1-201ENSMUST00000041639 4932415D10RikA0A1W2P6U8 4986 aa2.74□□□□□ -1.97
Syne1-201ENSMUST00000041639 A030005L19RikA0A1Y7VIU2 113 aa2.73□□□□□ -1.97
Syne1-201ENSMUST00000041639 A030005K14RikA0A1Y7VNY1 122 aa2.68□□□□□ -1.98
Syne1-201ENSMUST00000041639 Rnf213E9Q555 5152 aaKnown RBP2.68□□□□□ -1.98
Syne1-201ENSMUST00000041639 A0A1Y7VJ07 166 aa2.67□□□□□ -1.98
Syne1-201ENSMUST00000041639 Mt3P28184 68 aa2.67□□□□□ -1.98
Syne1-201ENSMUST00000041639 Syne2Q6ZWQ0 6874 aaKnown RBP2.67□□□□□ -1.98
Syne1-201ENSMUST00000041639 Muc5bE9Q5I3 4800 aa2.67□□□□□ -1.98
Syne1-201ENSMUST00000041639 Krtap31-2Q8CAY5 177 aa2.65□□□□□ -1.98
Syne1-201ENSMUST00000041639 ObscnA2AAJ9 8891 aaKnown RBP2.59□□□□□ -2
Syne1-201ENSMUST00000041639 Ush2AQ2QI47 5193 aa2.58□□□□□ -2
Syne1-201ENSMUST00000041639 Lce1a1Q9CQH5 143 aa2.56□□□□□ -2
Syne1-201ENSMUST00000041639 Gm11554B1AQB2 190 aa2.49□□□□□ -2.01
Syne1-201ENSMUST00000041639 A030014E15RikA0A1Y7VJV2 120 aa2.48□□□□□ -2.01
Syne1-201ENSMUST00000041639 Mt1P02802 61 aaKnown RBP2.47□□□□□ -2.01
Syne1-201ENSMUST00000041639 SspoQ8CG65 4998 aa2.45□□□□□ -2.02
Syne1-201ENSMUST00000041639 Sprr2bO70554 98 aa2.44□□□□□ -2.02
Syne1-201ENSMUST00000041639 Krtap6-3A0A087WQL6 57 aa2.41□□□□□ -2.02
Syne1-201ENSMUST00000041639 Krtap20-2E9Q0A8 60 aa2.4□□□□□ -2.03
Syne1-201ENSMUST00000041639 Macf1Q9QXZ0 7354 aaKnown RBP2.36□□□□□ -2.03
Syne1-201ENSMUST00000041639 Muc19Q6PZE0 7524 aa2.2□□□□□ -2.06
Syne1-201ENSMUST00000041639 NebE9Q1W3 7152 aa2.17□□□□□ -2.06
Syne1-201ENSMUST00000041639 DstQ91ZU6 7393 aaKnown RBP2.14□□□□□ -2.07
Syne1-201ENSMUST00000041639 Kmt2dQ6PDK2 5588 aa2.05□□□□□ -2.08
Syne1-201ENSMUST00000041639 Gm11555B1AQ89 175 aa2.05□□□□□ -2.08
Syne1-201ENSMUST00000041639 1110025L11RikO09048 78 aa2.05□□□□□ -2.08
Syne1-201ENSMUST00000041639 Krtap6-5Q925H3 78 aa2.05□□□□□ -2.08
Syne1-201ENSMUST00000041639 Eppk1Q8R0W0 6548 aa2.05□□□□□ -2.08
Syne1-201ENSMUST00000041639 Gm10229O08631 77 aa1.94□□□□□ -2.1
Syne1-201ENSMUST00000041639 A0A286YCP9 139 aa1.92□□□□□ -2.1
Syne1-201ENSMUST00000041639 Phgr1Q8K0G7 91 aa1.89□□□□□ -2.11
Syne1-201ENSMUST00000041639 Gm11568A2A4M2 211 aa1.88□□□□□ -2.11
Syne1-201ENSMUST00000041639 Krtap9-1Q64526 186 aa1.88□□□□□ -2.11
Syne1-201ENSMUST00000041639 Gm11559Q9D3H7 191 aa1.84□□□□□ -2.12
Syne1-201ENSMUST00000041639 Gpr98Q8VHN7 6298 aaKnown RBP1.8□□□□□ -2.12
Syne1-201ENSMUST00000041639 Gm11639A0A1D5RLM8 5808 aa1.62□□□□□ -2.15
Syne1-201ENSMUST00000041639 Krtap5-2Q9D5Z7 189 aa1.6□□□□□ -2.15
Syne1-201ENSMUST00000041639 Hmcn1D3YXG0 5634 aa1.56□□□□□ -2.16
Syne1-201ENSMUST00000041639 Krtap6-2O08884 159 aa1.56□□□□□ -2.16
Syne1-201ENSMUST00000041639 Gm4553A0A1B0GSA9 284 aa1.49□□□□□ -2.17
Syne1-201ENSMUST00000041639 Gm10153A0A1B0GRL1 320 aa1.48□□□□□ -2.17
Syne1-201ENSMUST00000041639 Krtap21-1Q925H4 128 aa1.45□□□□□ -2.18
Syne1-201ENSMUST00000041639 Gm2431E9Q8S1 172 aa1.43□□□□□ -2.18
Syne1-201ENSMUST00000041639 Gm45337A0A1B0GS71 263 aa1.42□□□□□ -2.18
Syne1-201ENSMUST00000041639 Gm11567Q9D141 195 aa1.41□□□□□ -2.18
Syne1-201ENSMUST00000041639 Gm40460A0A1B0GR10 244 aa1.36□□□□□ -2.19
Syne1-201ENSMUST00000041639 Gm7579A0A1B0GRJ4 243 aa1.36□□□□□ -2.19
Syne1-201ENSMUST00000041639 Krtap5-5Q2TA51 241 aa1.36□□□□□ -2.19
Syne1-201ENSMUST00000041639 Krtap5-4Q62220 223 aa1.36□□□□□ -2.19
Syne1-201ENSMUST00000041639 AhnakE9Q616 5656 aaKnown RBP1.32□□□□□ -2.2
Syne1-201ENSMUST00000041639 Gm39115A0A1B0GSH7 232 aa1.29□□□□□ -2.2
Syne1-201ENSMUST00000041639 Gm45618A0A1B0GSA0 219 aa1.17□□□□□ -2.22
Syne1-201ENSMUST00000041639 Gm29735A0A1B0GT06 219 aa1.02□□□□□ -2.25
Syne1-201ENSMUST00000041639 Krtap5-1Q64507 230 aa0.95□□□□□ -2.26
Syne1-201ENSMUST00000041639 Gm4559A4IF42 199 aa0.75□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 154.7 ms