RNA–Protein interactions for RNA: ENSMUST00000039267.9

Chd7-201, Transcript of Chromodomain-helicase-DNA-binding protein 7, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Chd7, Length 9,444 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7-201ENSMUST00000039267 Krtap4-7Q9D732 168 aa3.1□□□□□ -1.91
Chd7-201ENSMUST00000039267 Syne1Q6ZWR6 8799 aa3.1□□□□□ -1.91
Chd7-201ENSMUST00000039267 HydinQ80W93 5154 aa3.08□□□□□ -1.92
Chd7-201ENSMUST00000039267 Krtap4-2B1AQ85 167 aa3.07□□□□□ -1.92
Chd7-201ENSMUST00000039267 Abca13Q5SSE9 5034 aa3.07□□□□□ -1.92
Chd7-201ENSMUST00000039267 2300003K06RikA2A4M0 262 aa3.05□□□□□ -1.92
Chd7-201ENSMUST00000039267 Birc6O88738 4882 aa3.02□□□□□ -1.93
Chd7-201ENSMUST00000039267 Mdn1A2ANY6 5589 aaKnown RBP3□□□□□ -1.93
Chd7-201ENSMUST00000039267 Krtap4-1Q3UUY3 169 aa2.99□□□□□ -1.93
Chd7-201ENSMUST00000039267 Ubr4A2AN08 5180 aa2.97□□□□□ -1.93
Chd7-201ENSMUST00000039267 Herc1E9PZP8 4859 aa2.97□□□□□ -1.93
Chd7-201ENSMUST00000039267 Gm11564A2A4L9 201 aa2.93□□□□□ -1.94
Chd7-201ENSMUST00000039267 Gm11563B1AQ90 168 aa2.93□□□□□ -1.94
Chd7-201ENSMUST00000039267 Gm11595B1AQA7 289 aa2.93□□□□□ -1.94
Chd7-201ENSMUST00000039267 Krtap4-8B1AQA8 209 aa2.93□□□□□ -1.94
Chd7-201ENSMUST00000039267 Gm11596B1AQB0 205 aa2.93□□□□□ -1.94
Chd7-201ENSMUST00000039267 Krtap4-9B1AQA9 244 aa2.91□□□□□ -1.94
Chd7-201ENSMUST00000039267 Krtap4-13Q9D7P3 165 aa2.87□□□□□ -1.95
Chd7-201ENSMUST00000039267 Muc5bE9Q5I3 4800 aa2.86□□□□□ -1.95
Chd7-201ENSMUST00000039267 Syne2Q6ZWQ0 6874 aaKnown RBP2.84□□□□□ -1.96
Chd7-201ENSMUST00000039267 Rnf213E9Q555 5152 aaKnown RBP2.81□□□□□ -1.96
Chd7-201ENSMUST00000039267 4932415D10RikA0A1W2P6U8 4986 aa2.8□□□□□ -1.96
Chd7-201ENSMUST00000039267 Hmcn2A2AJ76 5100 aa2.74□□□□□ -1.97
Chd7-201ENSMUST00000039267 Krtap17-1A2A5X6 109 aa2.73□□□□□ -1.97
Chd7-201ENSMUST00000039267 Krtap6-3A0A087WQL6 57 aa2.7□□□□□ -1.98
Chd7-201ENSMUST00000039267 ObscnA2AAJ9 8891 aaKnown RBP2.68□□□□□ -1.98
Chd7-201ENSMUST00000039267 Ush2AQ2QI47 5193 aa2.67□□□□□ -1.98
Chd7-201ENSMUST00000039267 SspoQ8CG65 4998 aa2.66□□□□□ -1.98
Chd7-201ENSMUST00000039267 Fat4Q2PZL6 4981 aa2.65□□□□□ -1.98
Chd7-201ENSMUST00000039267 Muc16A0A140LJ72 8478 aa2.63□□□□□ -1.99
Chd7-201ENSMUST00000039267 Gm11554B1AQB2 190 aa2.61□□□□□ -1.99
Chd7-201ENSMUST00000039267 1110025L11RikO09048 78 aa2.56□□□□□ -2
Chd7-201ENSMUST00000039267 Krtap6-5Q925H3 78 aa2.56□□□□□ -2
Chd7-201ENSMUST00000039267 Krtap20-2E9Q0A8 60 aa2.49□□□□□ -2.01
Chd7-201ENSMUST00000039267 Fsip2A2ARZ3 6995 aa2.49□□□□□ -2.01
Chd7-201ENSMUST00000039267 Gm10229O08631 77 aa2.47□□□□□ -2.01
Chd7-201ENSMUST00000039267 Phgr1Q8K0G7 91 aa2.4□□□□□ -2.03
Chd7-201ENSMUST00000039267 Kmt2dQ6PDK2 5588 aa2.31□□□□□ -2.04
Chd7-201ENSMUST00000039267 Macf1Q9QXZ0 7354 aaKnown RBP2.12□□□□□ -2.07
Chd7-201ENSMUST00000039267 Gm11567Q9D141 195 aa2.07□□□□□ -2.08
Chd7-201ENSMUST00000039267 Muc19Q6PZE0 7524 aa2.05□□□□□ -2.08
Chd7-201ENSMUST00000039267 Gm11568A2A4M2 211 aa2.04□□□□□ -2.08
Chd7-201ENSMUST00000039267 Krtap9-1Q64526 186 aa2.04□□□□□ -2.08
Chd7-201ENSMUST00000039267 Gm11559Q9D3H7 191 aa2.04□□□□□ -2.08
Chd7-201ENSMUST00000039267 Eppk1Q8R0W0 6548 aa2□□□□□ -2.09
Chd7-201ENSMUST00000039267 Gm11555B1AQ89 175 aa2□□□□□ -2.09
Chd7-201ENSMUST00000039267 Krtap6-2O08884 159 aa1.91□□□□□ -2.1
Chd7-201ENSMUST00000039267 DstQ91ZU6 7393 aaKnown RBP1.9□□□□□ -2.1
Chd7-201ENSMUST00000039267 Gm11639A0A1D5RLM8 5808 aa1.88□□□□□ -2.11
Chd7-201ENSMUST00000039267 Hmcn1D3YXG0 5634 aa1.84□□□□□ -2.12
Chd7-201ENSMUST00000039267 NebE9Q1W3 7152 aa1.79□□□□□ -2.12
Chd7-201ENSMUST00000039267 Krtap21-1Q925H4 128 aa1.75□□□□□ -2.13
Chd7-201ENSMUST00000039267 Krtap5-2Q9D5Z7 189 aa1.73□□□□□ -2.13
Chd7-201ENSMUST00000039267 Gpr98Q8VHN7 6298 aaKnown RBP1.72□□□□□ -2.13
Chd7-201ENSMUST00000039267 Gm10153A0A1B0GRL1 320 aa1.59□□□□□ -2.15
Chd7-201ENSMUST00000039267 Gm4553A0A1B0GSA9 284 aa1.56□□□□□ -2.16
Chd7-201ENSMUST00000039267 AhnakE9Q616 5656 aaKnown RBP1.56□□□□□ -2.16
Chd7-201ENSMUST00000039267 Gm45337A0A1B0GS71 263 aa1.42□□□□□ -2.18
Chd7-201ENSMUST00000039267 Gm2431E9Q8S1 172 aa1.4□□□□□ -2.19
Chd7-201ENSMUST00000039267 Gm40460A0A1B0GR10 244 aa1.39□□□□□ -2.19
Chd7-201ENSMUST00000039267 Gm7579A0A1B0GRJ4 243 aa1.39□□□□□ -2.19
Chd7-201ENSMUST00000039267 Krtap5-5Q2TA51 241 aa1.39□□□□□ -2.19
Chd7-201ENSMUST00000039267 Krtap5-4Q62220 223 aa1.39□□□□□ -2.19
Chd7-201ENSMUST00000039267 A0A1Y7VJH8 109 aa1.33□□□□□ -2.2
Chd7-201ENSMUST00000039267 A030005L19RikA0A1Y7VIU2 113 aa1.33□□□□□ -2.2
Chd7-201ENSMUST00000039267 Gm39115A0A1B0GSH7 232 aa1.3□□□□□ -2.2
Chd7-201ENSMUST00000039267 A0A1Y7VLE6 161 aa1.29□□□□□ -2.2
Chd7-201ENSMUST00000039267 A0A286YCP9 139 aa1.16□□□□□ -2.22
Chd7-201ENSMUST00000039267 Gm29735A0A1B0GT06 219 aa1.11□□□□□ -2.23
Chd7-201ENSMUST00000039267 Krtap28-13A0A087WQP5 138 aa1.07□□□□□ -2.24
Chd7-201ENSMUST00000039267 Gm45618A0A1B0GSA0 219 aa1.02□□□□□ -2.25
Chd7-201ENSMUST00000039267 A030014E15RikA0A1Y7VJV2 120 aa0.93□□□□□ -2.26
Chd7-201ENSMUST00000039267 A0A1Y7VJ07 166 aa0.9□□□□□ -2.27
Chd7-201ENSMUST00000039267 Krtap28-10A0A1Y7VP58 119 aa0.82□□□□□ -2.28
Chd7-201ENSMUST00000039267 A030003K21RikA0A1Y7VIM3 128 aa0.81□□□□□ -2.28
Chd7-201ENSMUST00000039267 A030005K14RikA0A1Y7VNY1 122 aa0.81□□□□□ -2.28
Chd7-201ENSMUST00000039267 Gm7544A0A1Y7VJ58 118 aa0.79□□□□□ -2.28
Chd7-201ENSMUST00000039267 Krtap5-1Q64507 230 aa0.78□□□□□ -2.28
Chd7-201ENSMUST00000039267 Gm6217A0A1Y7VJK9 128 aa0.77□□□□□ -2.29
Chd7-201ENSMUST00000039267 Gm4559A4IF42 199 aa0.51□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 12.5 ms