RNA–Protein interactions for RNA: ENSMUST00000039074.12

Shank3-201, Transcript of SH3 and multiple ankyrin repeat domains protein 3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shank3, Length 7,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3-201ENSMUST00000039074 Krtap4-7Q9D732 168 aa4,61□□□□□ -1,67
Shank3-201ENSMUST00000039074 Birc6O88738 4882 aa4,58□□□□□ -1,68
Shank3-201ENSMUST00000039074 Lce1a2Q9D1K4 149 aa4,57□□□□□ -1,68
Shank3-201ENSMUST00000039074 Krtap4-13Q9D7P3 165 aa4,51□□□□□ -1,69
Shank3-201ENSMUST00000039074 Sprr2hO70559 108 aa4,5□□□□□ -1,69
Shank3-201ENSMUST00000039074 Gm11562A0PK51 136 aa4,41□□□□□ -1,7
Shank3-201ENSMUST00000039074 Krtap4-16Q91W93 202 aa4,41□□□□□ -1,7
Shank3-201ENSMUST00000039074 4932415D10RikA0A1W2P6U8 4986 aa4,4□□□□□ -1,7
Shank3-201ENSMUST00000039074 Lce1kJ3QP15 125 aa4,39□□□□□ -1,71
Shank3-201ENSMUST00000039074 Gm11938Q9D3H4 131 aa4,36□□□□□ -1,71
Shank3-201ENSMUST00000039074 ZanO88799 5376 aa4,34□□□□□ -1,72
Shank3-201ENSMUST00000039074 Mdn1A2ANY6 5589 aaKnown RBP4,32□□□□□ -1,72
Shank3-201ENSMUST00000039074 Krtap17-1A2A5X6 109 aa4,31□□□□□ -1,72
Shank3-201ENSMUST00000039074 Muc5bE9Q5I3 4800 aa4,29□□□□□ -1,72
Shank3-201ENSMUST00000039074 Lce1a1Q9CQH5 143 aa4,29□□□□□ -1,72
Shank3-201ENSMUST00000039074 Mt3P28184 68 aa4,26□□□□□ -1,73
Shank3-201ENSMUST00000039074 Fat4Q2PZL6 4981 aa4,25□□□□□ -1,73
Shank3-201ENSMUST00000039074 Krtap6-3A0A087WQL6 57 aa4,23□□□□□ -1,73
Shank3-201ENSMUST00000039074 Abca13Q5SSE9 5034 aa4,2□□□□□ -1,74
Shank3-201ENSMUST00000039074 Ubr4A2AN08 5180 aa4,19□□□□□ -1,74
Shank3-201ENSMUST00000039074 Syne2Q6ZWQ0 6874 aaKnown RBP4,17□□□□□ -1,74
Shank3-201ENSMUST00000039074 Hmcn2A2AJ76 5100 aa4,11□□□□□ -1,75
Shank3-201ENSMUST00000039074 Fsip2A2ARZ3 6995 aa4,11□□□□□ -1,75
Shank3-201ENSMUST00000039074 Gm11554B1AQB2 190 aa4,07□□□□□ -1,76
Shank3-201ENSMUST00000039074 Syne1Q6ZWR6 8799 aa4,03□□□□□ -1,76
Shank3-201ENSMUST00000039074 Sprr2bO70554 98 aa4□□□□□ -1,77
Shank3-201ENSMUST00000039074 Rnf213E9Q555 5152 aaKnown RBP3,93□□□□□ -1,78
Shank3-201ENSMUST00000039074 Ush2AQ2QI47 5193 aa3,9□□□□□ -1,78
Shank3-201ENSMUST00000039074 Krtap20-2E9Q0A8 60 aa3,85□□□□□ -1,79
Shank3-201ENSMUST00000039074 SspoQ8CG65 4998 aa3,82□□□□□ -1,8
Shank3-201ENSMUST00000039074 Mt1P02802 61 aaKnown RBP3,79□□□□□ -1,8
Shank3-201ENSMUST00000039074 Gm11555B1AQ89 175 aa3,49□□□□□ -1,85
Shank3-201ENSMUST00000039074 Eppk1Q8R0W0 6548 aa3,48□□□□□ -1,85
Shank3-201ENSMUST00000039074 ObscnA2AAJ9 8891 aaKnown RBP3,29□□□□□ -1,88
Shank3-201ENSMUST00000039074 DstQ91ZU6 7393 aaKnown RBP3,16□□□□□ -1,9
Shank3-201ENSMUST00000039074 Gm11559Q9D3H7 191 aa3,13□□□□□ -1,91
Shank3-201ENSMUST00000039074 1110025L11RikO09048 78 aa3,11□□□□□ -1,91
Shank3-201ENSMUST00000039074 Krtap6-5Q925H3 78 aa3,11□□□□□ -1,91
Shank3-201ENSMUST00000039074 Muc16A0A140LJ72 8478 aa3,11□□□□□ -1,91
Shank3-201ENSMUST00000039074 NebE9Q1W3 7152 aa3,08□□□□□ -1,92
Shank3-201ENSMUST00000039074 Gpr98Q8VHN7 6298 aaKnown RBP3,03□□□□□ -1,92
Shank3-201ENSMUST00000039074 Macf1Q9QXZ0 7354 aaKnown RBP3,03□□□□□ -1,92
Shank3-201ENSMUST00000039074 Phgr1Q8K0G7 91 aa3□□□□□ -1,93
Shank3-201ENSMUST00000039074 Gm10229O08631 77 aa2,99□□□□□ -1,93
Shank3-201ENSMUST00000039074 Kmt2dQ6PDK2 5588 aa2,99□□□□□ -1,93
Shank3-201ENSMUST00000039074 Gm11568A2A4M2 211 aa2,97□□□□□ -1,93
Shank3-201ENSMUST00000039074 Krtap9-1Q64526 186 aa2,97□□□□□ -1,93
Shank3-201ENSMUST00000039074 Gm11567Q9D141 195 aa2,92□□□□□ -1,94
Shank3-201ENSMUST00000039074 Gm11639A0A1D5RLM8 5808 aa2,77□□□□□ -1,97
Shank3-201ENSMUST00000039074 Muc19Q6PZE0 7524 aa2,7□□□□□ -1,98
Shank3-201ENSMUST00000039074 Hmcn1D3YXG0 5634 aa2,64□□□□□ -1,99
Shank3-201ENSMUST00000039074 Krtap5-2Q9D5Z7 189 aa2,62□□□□□ -1,99
Shank3-201ENSMUST00000039074 Gm4553A0A1B0GSA9 284 aa2,49□□□□□ -2,01
Shank3-201ENSMUST00000039074 Krtap6-2O08884 159 aa2,4□□□□□ -2,03
Shank3-201ENSMUST00000039074 AhnakE9Q616 5656 aaKnown RBP2,39□□□□□ -2,03
Shank3-201ENSMUST00000039074 Gm2431E9Q8S1 172 aa2,36□□□□□ -2,03
Shank3-201ENSMUST00000039074 A030005L19RikA0A1Y7VIU2 113 aa2,34□□□□□ -2,04
Shank3-201ENSMUST00000039074 Krtap21-1Q925H4 128 aa2,15□□□□□ -2,06
Shank3-201ENSMUST00000039074 Gm10153A0A1B0GRL1 320 aa2,15□□□□□ -2,07
Shank3-201ENSMUST00000039074 A0A1Y7VJH8 109 aa2,13□□□□□ -2,07
Shank3-201ENSMUST00000039074 Gm45337A0A1B0GS71 263 aa2,09□□□□□ -2,07
Shank3-201ENSMUST00000039074 Gm40460A0A1B0GR10 244 aa2,05□□□□□ -2,08
Shank3-201ENSMUST00000039074 Gm7579A0A1B0GRJ4 243 aa2,05□□□□□ -2,08
Shank3-201ENSMUST00000039074 Krtap5-5Q2TA51 241 aa2,05□□□□□ -2,08
Shank3-201ENSMUST00000039074 Krtap5-4Q62220 223 aa2,05□□□□□ -2,08
Shank3-201ENSMUST00000039074 Gm39115A0A1B0GSH7 232 aa1,96□□□□□ -2,09
Shank3-201ENSMUST00000039074 Gm45618A0A1B0GSA0 219 aa1,66□□□□□ -2,14
Shank3-201ENSMUST00000039074 A0A1Y7VLE6 161 aa1,61□□□□□ -2,15
Shank3-201ENSMUST00000039074 Gm29735A0A1B0GT06 219 aa1,52□□□□□ -2,17
Shank3-201ENSMUST00000039074 A0A1Y7VJ07 166 aa1,46□□□□□ -2,18
Shank3-201ENSMUST00000039074 Krtap5-1Q64507 230 aa1,42□□□□□ -2,18
Shank3-201ENSMUST00000039074 A0A286YCP9 139 aa1,39□□□□□ -2,19
Shank3-201ENSMUST00000039074 Krtap28-10A0A1Y7VP58 119 aa1,04□□□□□ -2,24
Shank3-201ENSMUST00000039074 Krtap28-13A0A087WQP5 138 aa1,04□□□□□ -2,24
Shank3-201ENSMUST00000039074 A030014E15RikA0A1Y7VJV2 120 aa0,97□□□□□ -2,25
Shank3-201ENSMUST00000039074 A030003K21RikA0A1Y7VIM3 128 aa0,88□□□□□ -2,27
Shank3-201ENSMUST00000039074 Gm4559A4IF42 199 aa0,85□□□□□ -2,27
Shank3-201ENSMUST00000039074 Gm6217A0A1Y7VJK9 128 aa0,71□□□□□ -2,3
Shank3-201ENSMUST00000039074 A030005K14RikA0A1Y7VNY1 122 aa0,64□□□□□ -2,31
Shank3-201ENSMUST00000039074 Gm7544A0A1Y7VJ58 118 aa0,47□□□□□ -2,33
Retrieved 80 of 22,080 RNA–protein pairs in 10,8 ms