RNA–Protein interactions for RNA: ENSMUST00000035661.6

Cspg4-201, Transcript of Chondroitin sulfate proteoglycan 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cspg4, Length 8,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4-201ENSMUST00000035661 Lce1a1Q9CQH5 143 aa3□□□□□ -1.93
Cspg4-201ENSMUST00000035661 Ubr4A2AN08 5180 aa2.99□□□□□ -1.93
Cspg4-201ENSMUST00000035661 Krtap4-1Q3UUY3 169 aa2.99□□□□□ -1.93
Cspg4-201ENSMUST00000035661 Fat4Q2PZL6 4981 aa2.98□□□□□ -1.93
Cspg4-201ENSMUST00000035661 Muc5bE9Q5I3 4800 aa2.97□□□□□ -1.93
Cspg4-201ENSMUST00000035661 Hmcn2A2AJ76 5100 aa2.96□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Ush2AQ2QI47 5193 aa2.96□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Gm11562A0PK51 136 aa2.94□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Gm11938Q9D3H4 131 aa2.94□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Gm11564A2A4L9 201 aa2.94□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Gm11563B1AQ90 168 aa2.94□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Gm11595B1AQA7 289 aa2.94□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Krtap4-8B1AQA8 209 aa2.94□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Mdn1A2ANY6 5589 aaKnown RBP2.92□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Krtap4-7Q9D732 168 aa2.92□□□□□ -1.94
Cspg4-201ENSMUST00000035661 2300003K06RikA2A4M0 262 aa2.91□□□□□ -1.94
Cspg4-201ENSMUST00000035661 Krtap4-9B1AQA9 244 aa2.89□□□□□ -1.95
Cspg4-201ENSMUST00000035661 Mt3P28184 68 aa2.86□□□□□ -1.95
Cspg4-201ENSMUST00000035661 Krtap17-1A2A5X6 109 aa2.84□□□□□ -1.96
Cspg4-201ENSMUST00000035661 Lce1kJ3QP15 125 aa2.82□□□□□ -1.96
Cspg4-201ENSMUST00000035661 Rnf213E9Q555 5152 aaKnown RBP2.82□□□□□ -1.96
Cspg4-201ENSMUST00000035661 Krtap4-13Q9D7P3 165 aa2.79□□□□□ -1.96
Cspg4-201ENSMUST00000035661 Krtap6-3A0A087WQL6 57 aa2.73□□□□□ -1.97
Cspg4-201ENSMUST00000035661 Syne2Q6ZWQ0 6874 aaKnown RBP2.72□□□□□ -1.97
Cspg4-201ENSMUST00000035661 SspoQ8CG65 4998 aa2.71□□□□□ -1.98
Cspg4-201ENSMUST00000035661 Fsip2A2ARZ3 6995 aa2.7□□□□□ -1.98
Cspg4-201ENSMUST00000035661 Syne1Q6ZWR6 8799 aa2.7□□□□□ -1.98
Cspg4-201ENSMUST00000035661 Krtap4-16Q91W93 202 aa2.63□□□□□ -1.99
Cspg4-201ENSMUST00000035661 Mt1P02802 61 aaKnown RBP2.62□□□□□ -1.99
Cspg4-201ENSMUST00000035661 Gm11554B1AQB2 190 aa2.62□□□□□ -1.99
Cspg4-201ENSMUST00000035661 Gm11555B1AQ89 175 aa2.57□□□□□ -2
Cspg4-201ENSMUST00000035661 Krtap20-2E9Q0A8 60 aa2.47□□□□□ -2.01
Cspg4-201ENSMUST00000035661 Eppk1Q8R0W0 6548 aa2.42□□□□□ -2.02
Cspg4-201ENSMUST00000035661 Muc16A0A140LJ72 8478 aa2.39□□□□□ -2.03
Cspg4-201ENSMUST00000035661 ObscnA2AAJ9 8891 aaKnown RBP2.39□□□□□ -2.03
Cspg4-201ENSMUST00000035661 Gm11559Q9D3H7 191 aa2.16□□□□□ -2.06
Cspg4-201ENSMUST00000035661 Gm11568A2A4M2 211 aa2.13□□□□□ -2.07
Cspg4-201ENSMUST00000035661 Krtap9-1Q64526 186 aa2.13□□□□□ -2.07
Cspg4-201ENSMUST00000035661 1110025L11RikO09048 78 aa2.12□□□□□ -2.07
Cspg4-201ENSMUST00000035661 Krtap6-5Q925H3 78 aa2.12□□□□□ -2.07
Cspg4-201ENSMUST00000035661 Krtap5-2Q9D5Z7 189 aa2.09□□□□□ -2.07
Cspg4-201ENSMUST00000035661 Macf1Q9QXZ0 7354 aaKnown RBP2.09□□□□□ -2.08
Cspg4-201ENSMUST00000035661 DstQ91ZU6 7393 aaKnown RBP2.06□□□□□ -2.08
Cspg4-201ENSMUST00000035661 NebE9Q1W3 7152 aa2.02□□□□□ -2.09
Cspg4-201ENSMUST00000035661 Gm10229O08631 77 aa1.98□□□□□ -2.09
Cspg4-201ENSMUST00000035661 Gm4553A0A1B0GSA9 284 aa1.96□□□□□ -2.1
Cspg4-201ENSMUST00000035661 Muc19Q6PZE0 7524 aa1.95□□□□□ -2.1
Cspg4-201ENSMUST00000035661 Kmt2dQ6PDK2 5588 aa1.93□□□□□ -2.1
Cspg4-201ENSMUST00000035661 Phgr1Q8K0G7 91 aa1.91□□□□□ -2.1
Cspg4-201ENSMUST00000035661 Gpr98Q8VHN7 6298 aaKnown RBP1.89□□□□□ -2.11
Cspg4-201ENSMUST00000035661 A030005L19RikA0A1Y7VIU2 113 aa1.85□□□□□ -2.11
Cspg4-201ENSMUST00000035661 Gm10153A0A1B0GRL1 320 aa1.83□□□□□ -2.12
Cspg4-201ENSMUST00000035661 Gm45337A0A1B0GS71 263 aa1.8□□□□□ -2.12
Cspg4-201ENSMUST00000035661 Gm2431E9Q8S1 172 aa1.79□□□□□ -2.12
Cspg4-201ENSMUST00000035661 Gm40460A0A1B0GR10 244 aa1.75□□□□□ -2.13
Cspg4-201ENSMUST00000035661 Gm7579A0A1B0GRJ4 243 aa1.75□□□□□ -2.13
Cspg4-201ENSMUST00000035661 Krtap5-5Q2TA51 241 aa1.75□□□□□ -2.13
Cspg4-201ENSMUST00000035661 Krtap5-4Q62220 223 aa1.75□□□□□ -2.13
Cspg4-201ENSMUST00000035661 Gm11639A0A1D5RLM8 5808 aa1.73□□□□□ -2.13
Cspg4-201ENSMUST00000035661 Gm11567Q9D141 195 aa1.72□□□□□ -2.13
Cspg4-201ENSMUST00000035661 Hmcn1D3YXG0 5634 aa1.71□□□□□ -2.14
Cspg4-201ENSMUST00000035661 Gm39115A0A1B0GSH7 232 aa1.69□□□□□ -2.14
Cspg4-201ENSMUST00000035661 A0A1Y7VJH8 109 aa1.67□□□□□ -2.14
Cspg4-201ENSMUST00000035661 Krtap6-2O08884 159 aa1.61□□□□□ -2.15
Cspg4-201ENSMUST00000035661 AhnakE9Q616 5656 aaKnown RBP1.59□□□□□ -2.16
Cspg4-201ENSMUST00000035661 Krtap21-1Q925H4 128 aa1.55□□□□□ -2.16
Cspg4-201ENSMUST00000035661 Gm45618A0A1B0GSA0 219 aa1.46□□□□□ -2.18
Cspg4-201ENSMUST00000035661 Gm29735A0A1B0GT06 219 aa1.35□□□□□ -2.19
Cspg4-201ENSMUST00000035661 A0A1Y7VLE6 161 aa1.33□□□□□ -2.2
Cspg4-201ENSMUST00000035661 A0A286YCP9 139 aa1.2□□□□□ -2.22
Cspg4-201ENSMUST00000035661 Krtap28-13A0A087WQP5 138 aa1.04□□□□□ -2.24
Cspg4-201ENSMUST00000035661 Krtap5-1Q64507 230 aa0.96□□□□□ -2.26
Cspg4-201ENSMUST00000035661 A030014E15RikA0A1Y7VJV2 120 aa0.95□□□□□ -2.26
Cspg4-201ENSMUST00000035661 A0A1Y7VJ07 166 aa0.75□□□□□ -2.29
Cspg4-201ENSMUST00000035661 Krtap28-10A0A1Y7VP58 119 aa0.68□□□□□ -2.3
Cspg4-201ENSMUST00000035661 A030005K14RikA0A1Y7VNY1 122 aa0.68□□□□□ -2.3
Cspg4-201ENSMUST00000035661 Gm4559A4IF42 199 aa0.66□□□□□ -2.3
Cspg4-201ENSMUST00000035661 A030003K21RikA0A1Y7VIM3 128 aa0.57□□□□□ -2.32
Cspg4-201ENSMUST00000035661 Gm6217A0A1Y7VJK9 128 aa0.54□□□□□ -2.32
Cspg4-201ENSMUST00000035661 Gm7544A0A1Y7VJ58 118 aa0.06□□□□□ -2.4
Retrieved 80 of 22,080 RNA–protein pairs in 15.8 ms