RNA–Protein interactions for RNA: ENSMUST00000025989.8

Tm9sf3-201, Transcript of Transmembrane 9 superfamily member 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tm9sf3, Length 6,144 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf3-201ENSMUST00000025989 Krtap4-8B1AQA8 209 aa6.43□□□□□ -1.38
Tm9sf3-201ENSMUST00000025989 ZanO88799 5376 aa6.42□□□□□ -1.38
Tm9sf3-201ENSMUST00000025989 Krtap4-9B1AQA9 244 aa6.39□□□□□ -1.39
Tm9sf3-201ENSMUST00000025989 2300003K06RikA2A4M0 262 aa6.36□□□□□ -1.39
Tm9sf3-201ENSMUST00000025989 Pkhd1l1Q80ZA4 4249 aa6.33□□□□□ -1.4
Tm9sf3-201ENSMUST00000025989 Rnf213E9Q555 5152 aaKnown RBP6.33□□□□□ -1.4
Tm9sf3-201ENSMUST00000025989 Krtap4-7Q9D732 168 aa6.3□□□□□ -1.4
Tm9sf3-201ENSMUST00000025989 Fsip2A2ARZ3 6995 aa6.29□□□□□ -1.4
Tm9sf3-201ENSMUST00000025989 Muc5bE9Q5I3 4800 aa6.27□□□□□ -1.41
Tm9sf3-201ENSMUST00000025989 Krtap17-1A2A5X6 109 aa6.25□□□□□ -1.41
Tm9sf3-201ENSMUST00000025989 Syne1Q6ZWR6 8799 aa6.25□□□□□ -1.41
Tm9sf3-201ENSMUST00000025989 Krtap4-13Q9D7P3 165 aa6.25□□□□□ -1.41
Tm9sf3-201ENSMUST00000025989 Ush2AQ2QI47 5193 aa6.19□□□□□ -1.42
Tm9sf3-201ENSMUST00000025989 Syne2Q6ZWQ0 6874 aaKnown RBP6.11□□□□□ -1.43
Tm9sf3-201ENSMUST00000025989 Lce1kJ3QP15 125 aa6.06□□□□□ -1.44
Tm9sf3-201ENSMUST00000025989 Gm11562A0PK51 136 aa6.02□□□□□ -1.45
Tm9sf3-201ENSMUST00000025989 Hmcn2A2AJ76 5100 aa5.99□□□□□ -1.45
Tm9sf3-201ENSMUST00000025989 Gm11938Q9D3H4 131 aa5.89□□□□□ -1.47
Tm9sf3-201ENSMUST00000025989 Lce1a1Q9CQH5 143 aa5.82□□□□□ -1.48
Tm9sf3-201ENSMUST00000025989 Sprr2hO70559 108 aa5.77□□□□□ -1.49
Tm9sf3-201ENSMUST00000025989 Mt3P28184 68 aa5.73□□□□□ -1.49
Tm9sf3-201ENSMUST00000025989 Krtap6-3A0A087WQL6 57 aa5.71□□□□□ -1.5
Tm9sf3-201ENSMUST00000025989 Krtap31-1Q9D644 177 aa5.69□□□□□ -1.5
Tm9sf3-201ENSMUST00000025989 SspoQ8CG65 4998 aa5.69□□□□□ -1.5
Tm9sf3-201ENSMUST00000025989 Sprr2dO70555 85 aa5.68□□□□□ -1.5
Tm9sf3-201ENSMUST00000025989 Gm11554B1AQB2 190 aa5.62□□□□□ -1.51
Tm9sf3-201ENSMUST00000025989 Muc16A0A140LJ72 8478 aa5.46□□□□□ -1.53
Tm9sf3-201ENSMUST00000025989 Krtap20-2E9Q0A8 60 aa5.37□□□□□ -1.55
Tm9sf3-201ENSMUST00000025989 Macf1Q9QXZ0 7354 aaKnown RBP5.33□□□□□ -1.56
Tm9sf3-201ENSMUST00000025989 Krtap4-16Q91W93 202 aa5.27□□□□□ -1.57
Tm9sf3-201ENSMUST00000025989 Sprr2bO70554 98 aa5.24□□□□□ -1.57
Tm9sf3-201ENSMUST00000025989 Mt1P02802 61 aaKnown RBP5.22□□□□□ -1.57
Tm9sf3-201ENSMUST00000025989 ObscnA2AAJ9 8891 aaKnown RBP5.05□□□□□ -1.6
Tm9sf3-201ENSMUST00000025989 NebE9Q1W3 7152 aa5.02□□□□□ -1.61
Tm9sf3-201ENSMUST00000025989 Eppk1Q8R0W0 6548 aa5.02□□□□□ -1.61
Tm9sf3-201ENSMUST00000025989 DstQ91ZU6 7393 aaKnown RBP4.97□□□□□ -1.61
Tm9sf3-201ENSMUST00000025989 Gm11555B1AQ89 175 aa4.95□□□□□ -1.62
Tm9sf3-201ENSMUST00000025989 Kmt2dQ6PDK2 5588 aa4.84□□□□□ -1.63
Tm9sf3-201ENSMUST00000025989 Krtap31-2Q8CAY5 177 aa4.68□□□□□ -1.66
Tm9sf3-201ENSMUST00000025989 Muc19Q6PZE0 7524 aa4.6□□□□□ -1.67
Tm9sf3-201ENSMUST00000025989 Gm11559Q9D3H7 191 aa4.31□□□□□ -1.72
Tm9sf3-201ENSMUST00000025989 1110025L11RikO09048 78 aa4.28□□□□□ -1.72
Tm9sf3-201ENSMUST00000025989 Krtap6-5Q925H3 78 aa4.28□□□□□ -1.72
Tm9sf3-201ENSMUST00000025989 Gm11568A2A4M2 211 aa4.2□□□□□ -1.74
Tm9sf3-201ENSMUST00000025989 Krtap9-1Q64526 186 aa4.2□□□□□ -1.74
Tm9sf3-201ENSMUST00000025989 Gpr98Q8VHN7 6298 aaKnown RBP4.13□□□□□ -1.75
Tm9sf3-201ENSMUST00000025989 Gm11639A0A1D5RLM8 5808 aa4.1□□□□□ -1.75
Tm9sf3-201ENSMUST00000025989 Gm10229O08631 77 aa4.07□□□□□ -1.76
Tm9sf3-201ENSMUST00000025989 Hmcn1D3YXG0 5634 aa3.81□□□□□ -1.8
Tm9sf3-201ENSMUST00000025989 Krtap5-2Q9D5Z7 189 aa3.72□□□□□ -1.81
Tm9sf3-201ENSMUST00000025989 Phgr1Q8K0G7 91 aa3.69□□□□□ -1.82
Tm9sf3-201ENSMUST00000025989 Gm4553A0A1B0GSA9 284 aa3.53□□□□□ -1.84
Tm9sf3-201ENSMUST00000025989 A0A1Y7VLE6 161 aa3.43□□□□□ -1.86
Tm9sf3-201ENSMUST00000025989 Gm2431E9Q8S1 172 aa3.37□□□□□ -1.87
Tm9sf3-201ENSMUST00000025989 AhnakE9Q616 5656 aaKnown RBP3.36□□□□□ -1.87
Tm9sf3-201ENSMUST00000025989 Krtap6-2O08884 159 aa3.31□□□□□ -1.88
Tm9sf3-201ENSMUST00000025989 A030005L19RikA0A1Y7VIU2 113 aa3.26□□□□□ -1.89
Tm9sf3-201ENSMUST00000025989 Krtap28-10A0A1Y7VP58 119 aa3.13□□□□□ -1.91
Tm9sf3-201ENSMUST00000025989 Gm10153A0A1B0GRL1 320 aa3.11□□□□□ -1.91
Tm9sf3-201ENSMUST00000025989 Gm7544A0A1Y7VJ58 118 aa3.05□□□□□ -1.92
Tm9sf3-201ENSMUST00000025989 A0A1Y7VJH8 109 aa3.05□□□□□ -1.92
Tm9sf3-201ENSMUST00000025989 Krtap28-13A0A087WQP5 138 aa3.04□□□□□ -1.92
Tm9sf3-201ENSMUST00000025989 A030003K21RikA0A1Y7VIM3 128 aa3.02□□□□□ -1.93
Tm9sf3-201ENSMUST00000025989 A0A1Y7VJ07 166 aa3.01□□□□□ -1.93
Tm9sf3-201ENSMUST00000025989 Krtap21-1Q925H4 128 aa3□□□□□ -1.93
Tm9sf3-201ENSMUST00000025989 A030005K14RikA0A1Y7VNY1 122 aa3□□□□□ -1.93
Tm9sf3-201ENSMUST00000025989 Gm45337A0A1B0GS71 263 aa2.99□□□□□ -1.93
Tm9sf3-201ENSMUST00000025989 Gm40460A0A1B0GR10 244 aa2.93□□□□□ -1.94
Tm9sf3-201ENSMUST00000025989 Gm7579A0A1B0GRJ4 243 aa2.93□□□□□ -1.94
Tm9sf3-201ENSMUST00000025989 Krtap5-5Q2TA51 241 aa2.93□□□□□ -1.94
Tm9sf3-201ENSMUST00000025989 Krtap5-4Q62220 223 aa2.93□□□□□ -1.94
Tm9sf3-201ENSMUST00000025989 Gm6217A0A1Y7VJK9 128 aa2.85□□□□□ -1.95
Tm9sf3-201ENSMUST00000025989 A030014E15RikA0A1Y7VJV2 120 aa2.85□□□□□ -1.95
Tm9sf3-201ENSMUST00000025989 Gm39115A0A1B0GSH7 232 aa2.76□□□□□ -1.97
Tm9sf3-201ENSMUST00000025989 Gm11567Q9D141 195 aa2.68□□□□□ -1.98
Tm9sf3-201ENSMUST00000025989 Gm45618A0A1B0GSA0 219 aa2.35□□□□□ -2.03
Tm9sf3-201ENSMUST00000025989 A0A286YCP9 139 aa2.33□□□□□ -2.04
Tm9sf3-201ENSMUST00000025989 Gm29735A0A1B0GT06 219 aa2.18□□□□□ -2.06
Tm9sf3-201ENSMUST00000025989 Krtap5-1Q64507 230 aa1.94□□□□□ -2.1
Tm9sf3-201ENSMUST00000025989 Gm4559A4IF42 199 aa1.16□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 12.3 ms