RNA–Protein interactions for RNA: ENSMUST00000022369.8

Vcl-201, Transcript of Vinculin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcl, Length 5,267 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcl-201ENSMUST00000022369 Gm11938Q9D3H4 131 aa3.78□□□□□ -1.8
Vcl-201ENSMUST00000022369 ZanO88799 5376 aa3.77□□□□□ -1.81
Vcl-201ENSMUST00000022369 Hmcn2A2AJ76 5100 aa3.75□□□□□ -1.81
Vcl-201ENSMUST00000022369 Gm11562A0PK51 136 aa3.74□□□□□ -1.81
Vcl-201ENSMUST00000022369 Krtap4-1Q3UUY3 169 aa3.71□□□□□ -1.82
Vcl-201ENSMUST00000022369 Krtap17-1A2A5X6 109 aa3.71□□□□□ -1.82
Vcl-201ENSMUST00000022369 2300003K06RikA2A4M0 262 aa3.65□□□□□ -1.82
Vcl-201ENSMUST00000022369 Muc5bE9Q5I3 4800 aa3.65□□□□□ -1.83
Vcl-201ENSMUST00000022369 Rnf213E9Q555 5152 aaKnown RBP3.63□□□□□ -1.83
Vcl-201ENSMUST00000022369 Gm11564A2A4L9 201 aa3.63□□□□□ -1.83
Vcl-201ENSMUST00000022369 Gm11563B1AQ90 168 aa3.63□□□□□ -1.83
Vcl-201ENSMUST00000022369 Gm11595B1AQA7 289 aa3.63□□□□□ -1.83
Vcl-201ENSMUST00000022369 Krtap4-8B1AQA8 209 aa3.63□□□□□ -1.83
Vcl-201ENSMUST00000022369 Gm11596B1AQB0 205 aa3.63□□□□□ -1.83
Vcl-201ENSMUST00000022369 Krtap4-9B1AQA9 244 aa3.62□□□□□ -1.83
Vcl-201ENSMUST00000022369 Krtap4-7Q9D732 168 aa3.61□□□□□ -1.83
Vcl-201ENSMUST00000022369 Lce1kJ3QP15 125 aa3.59□□□□□ -1.83
Vcl-201ENSMUST00000022369 Mt3P28184 68 aa3.53□□□□□ -1.84
Vcl-201ENSMUST00000022369 Krtap4-13Q9D7P3 165 aa3.52□□□□□ -1.85
Vcl-201ENSMUST00000022369 Ush2AQ2QI47 5193 aa3.52□□□□□ -1.85
Vcl-201ENSMUST00000022369 Krtap4-16Q91W93 202 aa3.47□□□□□ -1.85
Vcl-201ENSMUST00000022369 Fsip2A2ARZ3 6995 aa3.45□□□□□ -1.86
Vcl-201ENSMUST00000022369 SspoQ8CG65 4998 aa3.38□□□□□ -1.87
Vcl-201ENSMUST00000022369 Syne2Q6ZWQ0 6874 aaKnown RBP3.36□□□□□ -1.87
Vcl-201ENSMUST00000022369 Mt1P02802 61 aaKnown RBP3.35□□□□□ -1.87
Vcl-201ENSMUST00000022369 Muc16A0A140LJ72 8478 aa3.33□□□□□ -1.88
Vcl-201ENSMUST00000022369 Lce1a1Q9CQH5 143 aa3.3□□□□□ -1.88
Vcl-201ENSMUST00000022369 ObscnA2AAJ9 8891 aaKnown RBP3.23□□□□□ -1.89
Vcl-201ENSMUST00000022369 Krtap6-3A0A087WQL6 57 aa3.23□□□□□ -1.89
Vcl-201ENSMUST00000022369 Gm11554B1AQB2 190 aa3.16□□□□□ -1.9
Vcl-201ENSMUST00000022369 A0A1Y7VLE6 161 aa3.15□□□□□ -1.9
Vcl-201ENSMUST00000022369 Krtap20-2E9Q0A8 60 aa3.11□□□□□ -1.91
Vcl-201ENSMUST00000022369 Sprr2bO70554 98 aa3.08□□□□□ -1.92
Vcl-201ENSMUST00000022369 Macf1Q9QXZ0 7354 aaKnown RBP2.9□□□□□ -1.95
Vcl-201ENSMUST00000022369 A0A1Y7VJH8 109 aa2.89□□□□□ -1.95
Vcl-201ENSMUST00000022369 Kmt2dQ6PDK2 5588 aa2.89□□□□□ -1.95
Vcl-201ENSMUST00000022369 Krtap31-2Q8CAY5 177 aa2.86□□□□□ -1.95
Vcl-201ENSMUST00000022369 A030003K21RikA0A1Y7VIM3 128 aa2.84□□□□□ -1.96
Vcl-201ENSMUST00000022369 Krtap28-10A0A1Y7VP58 119 aa2.84□□□□□ -1.96
Vcl-201ENSMUST00000022369 Eppk1Q8R0W0 6548 aa2.83□□□□□ -1.96
Vcl-201ENSMUST00000022369 DstQ91ZU6 7393 aaKnown RBP2.81□□□□□ -1.96
Vcl-201ENSMUST00000022369 Gm11555B1AQ89 175 aa2.78□□□□□ -1.96
Vcl-201ENSMUST00000022369 NebE9Q1W3 7152 aa2.73□□□□□ -1.97
Vcl-201ENSMUST00000022369 1110025L11RikO09048 78 aa2.72□□□□□ -1.97
Vcl-201ENSMUST00000022369 Krtap6-5Q925H3 78 aa2.72□□□□□ -1.97
Vcl-201ENSMUST00000022369 Gm7544A0A1Y7VJ58 118 aa2.7□□□□□ -1.98
Vcl-201ENSMUST00000022369 Krtap28-13A0A087WQP5 138 aa2.68□□□□□ -1.98
Vcl-201ENSMUST00000022369 Gm6217A0A1Y7VJK9 128 aa2.65□□□□□ -1.98
Vcl-201ENSMUST00000022369 A030005L19RikA0A1Y7VIU2 113 aa2.65□□□□□ -1.98
Vcl-201ENSMUST00000022369 A030005K14RikA0A1Y7VNY1 122 aa2.61□□□□□ -1.99
Vcl-201ENSMUST00000022369 Muc19Q6PZE0 7524 aa2.59□□□□□ -1.99
Vcl-201ENSMUST00000022369 Gm10229O08631 77 aa2.56□□□□□ -2
Vcl-201ENSMUST00000022369 A0A1Y7VJ07 166 aa2.52□□□□□ -2.01
Vcl-201ENSMUST00000022369 Gm11568A2A4M2 211 aa2.5□□□□□ -2.01
Vcl-201ENSMUST00000022369 Krtap9-1Q64526 186 aa2.5□□□□□ -2.01
Vcl-201ENSMUST00000022369 Gm11559Q9D3H7 191 aa2.47□□□□□ -2.01
Vcl-201ENSMUST00000022369 Phgr1Q8K0G7 91 aa2.42□□□□□ -2.02
Vcl-201ENSMUST00000022369 Gm11639A0A1D5RLM8 5808 aa2.42□□□□□ -2.02
Vcl-201ENSMUST00000022369 Gpr98Q8VHN7 6298 aaKnown RBP2.3□□□□□ -2.04
Vcl-201ENSMUST00000022369 A030014E15RikA0A1Y7VJV2 120 aa2.29□□□□□ -2.04
Vcl-201ENSMUST00000022369 Krtap5-2Q9D5Z7 189 aa2.23□□□□□ -2.05
Vcl-201ENSMUST00000022369 Hmcn1D3YXG0 5634 aa2.2□□□□□ -2.06
Vcl-201ENSMUST00000022369 Gm4553A0A1B0GSA9 284 aa2.09□□□□□ -2.08
Vcl-201ENSMUST00000022369 Krtap6-2O08884 159 aa2.06□□□□□ -2.08
Vcl-201ENSMUST00000022369 AhnakE9Q616 5656 aaKnown RBP1.96□□□□□ -2.1
Vcl-201ENSMUST00000022369 Gm2431E9Q8S1 172 aa1.95□□□□□ -2.1
Vcl-201ENSMUST00000022369 Krtap21-1Q925H4 128 aa1.94□□□□□ -2.1
Vcl-201ENSMUST00000022369 Gm10153A0A1B0GRL1 320 aa1.92□□□□□ -2.1
Vcl-201ENSMUST00000022369 A0A286YCP9 139 aa1.88□□□□□ -2.11
Vcl-201ENSMUST00000022369 Gm45337A0A1B0GS71 263 aa1.81□□□□□ -2.12
Vcl-201ENSMUST00000022369 Gm40460A0A1B0GR10 244 aa1.8□□□□□ -2.12
Vcl-201ENSMUST00000022369 Gm7579A0A1B0GRJ4 243 aa1.8□□□□□ -2.12
Vcl-201ENSMUST00000022369 Krtap5-5Q2TA51 241 aa1.8□□□□□ -2.12
Vcl-201ENSMUST00000022369 Krtap5-4Q62220 223 aa1.8□□□□□ -2.12
Vcl-201ENSMUST00000022369 Gm11567Q9D141 195 aa1.75□□□□□ -2.13
Vcl-201ENSMUST00000022369 Gm39115A0A1B0GSH7 232 aa1.67□□□□□ -2.14
Vcl-201ENSMUST00000022369 Gm45618A0A1B0GSA0 219 aa1.58□□□□□ -2.16
Vcl-201ENSMUST00000022369 Gm29735A0A1B0GT06 219 aa1.37□□□□□ -2.19
Vcl-201ENSMUST00000022369 Krtap5-1Q64507 230 aa1.04□□□□□ -2.24
Vcl-201ENSMUST00000022369 Gm4559A4IF42 199 aa0.79□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 94.4 ms