RNA–Protein interactions for RNA: ENSMUST00000020931.5

Smc6-201, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc6, Length 5,603 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-201ENSMUST00000020931 Gm11562A0PK51 136 aa5,6□□□□□ -1,51
Smc6-201ENSMUST00000020931 Kiaa1109A2AAE1 5005 aa5,57□□□□□ -1,52
Smc6-201ENSMUST00000020931 Krtap4-9B1AQA9 244 aa5,57□□□□□ -1,52
Smc6-201ENSMUST00000020931 Pkhd1E9PZ36 4059 aa5,56□□□□□ -1,52
Smc6-201ENSMUST00000020931 Lce1a2Q9D1K4 149 aa5,54□□□□□ -1,52
Smc6-201ENSMUST00000020931 Birc6O88738 4882 aa5,51□□□□□ -1,53
Smc6-201ENSMUST00000020931 Pkhd1l1Q80ZA4 4249 aa5,47□□□□□ -1,53
Smc6-201ENSMUST00000020931 Mt3P28184 68 aa5,46□□□□□ -1,54
Smc6-201ENSMUST00000020931 Krtap4-13Q9D7P3 165 aa5,46□□□□□ -1,54
Smc6-201ENSMUST00000020931 Lce1kJ3QP15 125 aa5,44□□□□□ -1,54
Smc6-201ENSMUST00000020931 Krtap31-2Q8CAY5 177 aa5,34□□□□□ -1,56
Smc6-201ENSMUST00000020931 4932415D10RikA0A1W2P6U8 4986 aa5,32□□□□□ -1,56
Smc6-201ENSMUST00000020931 Muc5bE9Q5I3 4800 aa5,28□□□□□ -1,56
Smc6-201ENSMUST00000020931 Mdn1A2ANY6 5589 aaKnown RBP5,28□□□□□ -1,56
Smc6-201ENSMUST00000020931 Lce1a1Q9CQH5 143 aa5,22□□□□□ -1,57
Smc6-201ENSMUST00000020931 Sprr2bO70554 98 aa5,2□□□□□ -1,58
Smc6-201ENSMUST00000020931 Krtap6-3A0A087WQL6 57 aa5,15□□□□□ -1,58
Smc6-201ENSMUST00000020931 Hmcn2A2AJ76 5100 aa5,12□□□□□ -1,59
Smc6-201ENSMUST00000020931 Syne2Q6ZWQ0 6874 aaKnown RBP5,12□□□□□ -1,59
Smc6-201ENSMUST00000020931 Krtap17-1A2A5X6 109 aa5,11□□□□□ -1,59
Smc6-201ENSMUST00000020931 Ubr4A2AN08 5180 aa5,09□□□□□ -1,59
Smc6-201ENSMUST00000020931 A0A1Y7VLE6 161 aa5,05□□□□□ -1,6
Smc6-201ENSMUST00000020931 Fat4Q2PZL6 4981 aa5,05□□□□□ -1,6
Smc6-201ENSMUST00000020931 ZanO88799 5376 aa5,01□□□□□ -1,61
Smc6-201ENSMUST00000020931 Fsip2A2ARZ3 6995 aa5□□□□□ -1,61
Smc6-201ENSMUST00000020931 Gm11554B1AQB2 190 aa5□□□□□ -1,61
Smc6-201ENSMUST00000020931 Muc16A0A140LJ72 8478 aa4,99□□□□□ -1,61
Smc6-201ENSMUST00000020931 Abca13Q5SSE9 5034 aa4,81□□□□□ -1,64
Smc6-201ENSMUST00000020931 Mt1P02802 61 aaKnown RBP4,79□□□□□ -1,64
Smc6-201ENSMUST00000020931 Rnf213E9Q555 5152 aaKnown RBP4,75□□□□□ -1,65
Smc6-201ENSMUST00000020931 A030003K21RikA0A1Y7VIM3 128 aa4,69□□□□□ -1,66
Smc6-201ENSMUST00000020931 Krtap20-2E9Q0A8 60 aa4,65□□□□□ -1,67
Smc6-201ENSMUST00000020931 ObscnA2AAJ9 8891 aaKnown RBP4,57□□□□□ -1,68
Smc6-201ENSMUST00000020931 SspoQ8CG65 4998 aa4,56□□□□□ -1,68
Smc6-201ENSMUST00000020931 Eppk1Q8R0W0 6548 aa4,54□□□□□ -1,68
Smc6-201ENSMUST00000020931 Ush2AQ2QI47 5193 aa4,45□□□□□ -1,7
Smc6-201ENSMUST00000020931 A0A1Y7VJH8 109 aa4,43□□□□□ -1,7
Smc6-201ENSMUST00000020931 Gm6217A0A1Y7VJK9 128 aa4,42□□□□□ -1,7
Smc6-201ENSMUST00000020931 Krtap28-10A0A1Y7VP58 119 aa4,42□□□□□ -1,7
Smc6-201ENSMUST00000020931 A0A1Y7VJ07 166 aa4,4□□□□□ -1,71
Smc6-201ENSMUST00000020931 Krtap28-13A0A087WQP5 138 aa4,38□□□□□ -1,71
Smc6-201ENSMUST00000020931 A030005K14RikA0A1Y7VNY1 122 aa4,35□□□□□ -1,71
Smc6-201ENSMUST00000020931 Gm7544A0A1Y7VJ58 118 aa4,15□□□□□ -1,75
Smc6-201ENSMUST00000020931 A030014E15RikA0A1Y7VJV2 120 aa4,07□□□□□ -1,76
Smc6-201ENSMUST00000020931 A030005L19RikA0A1Y7VIU2 113 aa4,02□□□□□ -1,77
Smc6-201ENSMUST00000020931 Kmt2dQ6PDK2 5588 aa4,01□□□□□ -1,77
Smc6-201ENSMUST00000020931 DstQ91ZU6 7393 aaKnown RBP3,98□□□□□ -1,77
Smc6-201ENSMUST00000020931 1110025L11RikO09048 78 aa3,96□□□□□ -1,78
Smc6-201ENSMUST00000020931 Krtap6-5Q925H3 78 aa3,96□□□□□ -1,78
Smc6-201ENSMUST00000020931 Gm11555B1AQ89 175 aa3,92□□□□□ -1,78
Smc6-201ENSMUST00000020931 NebE9Q1W3 7152 aa3,85□□□□□ -1,79
Smc6-201ENSMUST00000020931 Gm10229O08631 77 aa3,84□□□□□ -1,8
Smc6-201ENSMUST00000020931 Macf1Q9QXZ0 7354 aaKnown RBP3,77□□□□□ -1,81
Smc6-201ENSMUST00000020931 Phgr1Q8K0G7 91 aa3,73□□□□□ -1,81
Smc6-201ENSMUST00000020931 Muc19Q6PZE0 7524 aa3,69□□□□□ -1,82
Smc6-201ENSMUST00000020931 Gm11559Q9D3H7 191 aa3,69□□□□□ -1,82
Smc6-201ENSMUST00000020931 Gm11568A2A4M2 211 aa3,45□□□□□ -1,86
Smc6-201ENSMUST00000020931 Krtap9-1Q64526 186 aa3,45□□□□□ -1,86
Smc6-201ENSMUST00000020931 Gm11639A0A1D5RLM8 5808 aa3,4□□□□□ -1,87
Smc6-201ENSMUST00000020931 A0A286YCP9 139 aa3,38□□□□□ -1,87
Smc6-201ENSMUST00000020931 Gpr98Q8VHN7 6298 aaKnown RBP3,34□□□□□ -1,88
Smc6-201ENSMUST00000020931 Gm11567Q9D141 195 aa3,33□□□□□ -1,88
Smc6-201ENSMUST00000020931 Krtap6-2O08884 159 aa3,03□□□□□ -1,92
Smc6-201ENSMUST00000020931 Krtap5-2Q9D5Z7 189 aa2,97□□□□□ -1,93
Smc6-201ENSMUST00000020931 Hmcn1D3YXG0 5634 aa2,83□□□□□ -1,96
Smc6-201ENSMUST00000020931 Gm4553A0A1B0GSA9 284 aa2,82□□□□□ -1,96
Smc6-201ENSMUST00000020931 Krtap21-1Q925H4 128 aa2,67□□□□□ -1,98
Smc6-201ENSMUST00000020931 Gm2431E9Q8S1 172 aa2,64□□□□□ -1,99
Smc6-201ENSMUST00000020931 AhnakE9Q616 5656 aaKnown RBP2,62□□□□□ -1,99
Smc6-201ENSMUST00000020931 Gm10153A0A1B0GRL1 320 aa2,36□□□□□ -2,03
Smc6-201ENSMUST00000020931 Gm45337A0A1B0GS71 263 aa2,27□□□□□ -2,05
Smc6-201ENSMUST00000020931 Gm40460A0A1B0GR10 244 aa2,26□□□□□ -2,05
Smc6-201ENSMUST00000020931 Gm7579A0A1B0GRJ4 243 aa2,26□□□□□ -2,05
Smc6-201ENSMUST00000020931 Krtap5-5Q2TA51 241 aa2,26□□□□□ -2,05
Smc6-201ENSMUST00000020931 Krtap5-4Q62220 223 aa2,26□□□□□ -2,05
Smc6-201ENSMUST00000020931 Gm39115A0A1B0GSH7 232 aa2,12□□□□□ -2,07
Smc6-201ENSMUST00000020931 Gm45618A0A1B0GSA0 219 aa1,84□□□□□ -2,12
Smc6-201ENSMUST00000020931 Gm29735A0A1B0GT06 219 aa1,77□□□□□ -2,13
Smc6-201ENSMUST00000020931 Krtap5-1Q64507 230 aa1,61□□□□□ -2,15
Smc6-201ENSMUST00000020931 Gm4559A4IF42 199 aa1,3□□□□□ -2,2
Retrieved 80 of 22,080 RNA–protein pairs in 9,8 ms