RNA–Protein interactions for RNA: ENSMUST00000020931.5

Smc6-201, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc6, Length 5,603 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-201ENSMUST00000020931 Gm11562A0PK51 136 aa5.6□□□□□ -1.51
Smc6-201ENSMUST00000020931 Kiaa1109A2AAE1 5005 aa5.57□□□□□ -1.52
Smc6-201ENSMUST00000020931 Krtap4-9B1AQA9 244 aa5.57□□□□□ -1.52
Smc6-201ENSMUST00000020931 Pkhd1E9PZ36 4059 aa5.56□□□□□ -1.52
Smc6-201ENSMUST00000020931 Lce1a2Q9D1K4 149 aa5.54□□□□□ -1.52
Smc6-201ENSMUST00000020931 Birc6O88738 4882 aa5.51□□□□□ -1.53
Smc6-201ENSMUST00000020931 Pkhd1l1Q80ZA4 4249 aa5.47□□□□□ -1.53
Smc6-201ENSMUST00000020931 Mt3P28184 68 aa5.46□□□□□ -1.54
Smc6-201ENSMUST00000020931 Krtap4-13Q9D7P3 165 aa5.46□□□□□ -1.54
Smc6-201ENSMUST00000020931 Lce1kJ3QP15 125 aa5.44□□□□□ -1.54
Smc6-201ENSMUST00000020931 Krtap31-2Q8CAY5 177 aa5.34□□□□□ -1.56
Smc6-201ENSMUST00000020931 4932415D10RikA0A1W2P6U8 4986 aa5.32□□□□□ -1.56
Smc6-201ENSMUST00000020931 Muc5bE9Q5I3 4800 aa5.28□□□□□ -1.56
Smc6-201ENSMUST00000020931 Mdn1A2ANY6 5589 aaKnown RBP5.28□□□□□ -1.56
Smc6-201ENSMUST00000020931 Lce1a1Q9CQH5 143 aa5.22□□□□□ -1.57
Smc6-201ENSMUST00000020931 Sprr2bO70554 98 aa5.2□□□□□ -1.58
Smc6-201ENSMUST00000020931 Krtap6-3A0A087WQL6 57 aa5.15□□□□□ -1.58
Smc6-201ENSMUST00000020931 Hmcn2A2AJ76 5100 aa5.12□□□□□ -1.59
Smc6-201ENSMUST00000020931 Syne2Q6ZWQ0 6874 aaKnown RBP5.12□□□□□ -1.59
Smc6-201ENSMUST00000020931 Krtap17-1A2A5X6 109 aa5.11□□□□□ -1.59
Smc6-201ENSMUST00000020931 Ubr4A2AN08 5180 aa5.09□□□□□ -1.59
Smc6-201ENSMUST00000020931 A0A1Y7VLE6 161 aa5.05□□□□□ -1.6
Smc6-201ENSMUST00000020931 Fat4Q2PZL6 4981 aa5.05□□□□□ -1.6
Smc6-201ENSMUST00000020931 ZanO88799 5376 aa5.01□□□□□ -1.61
Smc6-201ENSMUST00000020931 Fsip2A2ARZ3 6995 aa5□□□□□ -1.61
Smc6-201ENSMUST00000020931 Gm11554B1AQB2 190 aa5□□□□□ -1.61
Smc6-201ENSMUST00000020931 Muc16A0A140LJ72 8478 aa4.99□□□□□ -1.61
Smc6-201ENSMUST00000020931 Abca13Q5SSE9 5034 aa4.81□□□□□ -1.64
Smc6-201ENSMUST00000020931 Mt1P02802 61 aaKnown RBP4.79□□□□□ -1.64
Smc6-201ENSMUST00000020931 Rnf213E9Q555 5152 aaKnown RBP4.75□□□□□ -1.65
Smc6-201ENSMUST00000020931 A030003K21RikA0A1Y7VIM3 128 aa4.69□□□□□ -1.66
Smc6-201ENSMUST00000020931 Krtap20-2E9Q0A8 60 aa4.65□□□□□ -1.67
Smc6-201ENSMUST00000020931 ObscnA2AAJ9 8891 aaKnown RBP4.57□□□□□ -1.68
Smc6-201ENSMUST00000020931 SspoQ8CG65 4998 aa4.56□□□□□ -1.68
Smc6-201ENSMUST00000020931 Eppk1Q8R0W0 6548 aa4.54□□□□□ -1.68
Smc6-201ENSMUST00000020931 Ush2AQ2QI47 5193 aa4.45□□□□□ -1.7
Smc6-201ENSMUST00000020931 A0A1Y7VJH8 109 aa4.43□□□□□ -1.7
Smc6-201ENSMUST00000020931 Gm6217A0A1Y7VJK9 128 aa4.42□□□□□ -1.7
Smc6-201ENSMUST00000020931 Krtap28-10A0A1Y7VP58 119 aa4.42□□□□□ -1.7
Smc6-201ENSMUST00000020931 A0A1Y7VJ07 166 aa4.4□□□□□ -1.71
Smc6-201ENSMUST00000020931 Krtap28-13A0A087WQP5 138 aa4.38□□□□□ -1.71
Smc6-201ENSMUST00000020931 A030005K14RikA0A1Y7VNY1 122 aa4.35□□□□□ -1.71
Smc6-201ENSMUST00000020931 Gm7544A0A1Y7VJ58 118 aa4.15□□□□□ -1.75
Smc6-201ENSMUST00000020931 A030014E15RikA0A1Y7VJV2 120 aa4.07□□□□□ -1.76
Smc6-201ENSMUST00000020931 A030005L19RikA0A1Y7VIU2 113 aa4.02□□□□□ -1.77
Smc6-201ENSMUST00000020931 Kmt2dQ6PDK2 5588 aa4.01□□□□□ -1.77
Smc6-201ENSMUST00000020931 DstQ91ZU6 7393 aaKnown RBP3.98□□□□□ -1.77
Smc6-201ENSMUST00000020931 1110025L11RikO09048 78 aa3.96□□□□□ -1.78
Smc6-201ENSMUST00000020931 Krtap6-5Q925H3 78 aa3.96□□□□□ -1.78
Smc6-201ENSMUST00000020931 Gm11555B1AQ89 175 aa3.92□□□□□ -1.78
Smc6-201ENSMUST00000020931 NebE9Q1W3 7152 aa3.85□□□□□ -1.79
Smc6-201ENSMUST00000020931 Gm10229O08631 77 aa3.84□□□□□ -1.8
Smc6-201ENSMUST00000020931 Macf1Q9QXZ0 7354 aaKnown RBP3.77□□□□□ -1.81
Smc6-201ENSMUST00000020931 Phgr1Q8K0G7 91 aa3.73□□□□□ -1.81
Smc6-201ENSMUST00000020931 Muc19Q6PZE0 7524 aa3.69□□□□□ -1.82
Smc6-201ENSMUST00000020931 Gm11559Q9D3H7 191 aa3.69□□□□□ -1.82
Smc6-201ENSMUST00000020931 Gm11568A2A4M2 211 aa3.45□□□□□ -1.86
Smc6-201ENSMUST00000020931 Krtap9-1Q64526 186 aa3.45□□□□□ -1.86
Smc6-201ENSMUST00000020931 Gm11639A0A1D5RLM8 5808 aa3.4□□□□□ -1.87
Smc6-201ENSMUST00000020931 A0A286YCP9 139 aa3.38□□□□□ -1.87
Smc6-201ENSMUST00000020931 Gpr98Q8VHN7 6298 aaKnown RBP3.34□□□□□ -1.88
Smc6-201ENSMUST00000020931 Gm11567Q9D141 195 aa3.33□□□□□ -1.88
Smc6-201ENSMUST00000020931 Krtap6-2O08884 159 aa3.03□□□□□ -1.92
Smc6-201ENSMUST00000020931 Krtap5-2Q9D5Z7 189 aa2.97□□□□□ -1.93
Smc6-201ENSMUST00000020931 Hmcn1D3YXG0 5634 aa2.83□□□□□ -1.96
Smc6-201ENSMUST00000020931 Gm4553A0A1B0GSA9 284 aa2.82□□□□□ -1.96
Smc6-201ENSMUST00000020931 Krtap21-1Q925H4 128 aa2.67□□□□□ -1.98
Smc6-201ENSMUST00000020931 Gm2431E9Q8S1 172 aa2.64□□□□□ -1.99
Smc6-201ENSMUST00000020931 AhnakE9Q616 5656 aaKnown RBP2.62□□□□□ -1.99
Smc6-201ENSMUST00000020931 Gm10153A0A1B0GRL1 320 aa2.36□□□□□ -2.03
Smc6-201ENSMUST00000020931 Gm45337A0A1B0GS71 263 aa2.27□□□□□ -2.05
Smc6-201ENSMUST00000020931 Gm40460A0A1B0GR10 244 aa2.26□□□□□ -2.05
Smc6-201ENSMUST00000020931 Gm7579A0A1B0GRJ4 243 aa2.26□□□□□ -2.05
Smc6-201ENSMUST00000020931 Krtap5-5Q2TA51 241 aa2.26□□□□□ -2.05
Smc6-201ENSMUST00000020931 Krtap5-4Q62220 223 aa2.26□□□□□ -2.05
Smc6-201ENSMUST00000020931 Gm39115A0A1B0GSH7 232 aa2.12□□□□□ -2.07
Smc6-201ENSMUST00000020931 Gm45618A0A1B0GSA0 219 aa1.84□□□□□ -2.12
Smc6-201ENSMUST00000020931 Gm29735A0A1B0GT06 219 aa1.77□□□□□ -2.13
Smc6-201ENSMUST00000020931 Krtap5-1Q64507 230 aa1.61□□□□□ -2.15
Smc6-201ENSMUST00000020931 Gm4559A4IF42 199 aa1.3□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 11.5 ms