RNA–Protein interactions for RNA: ENSMUST00000011895.13

Sptbn4-201, Transcript of Spectrin beta chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Sptbn4, Length 8,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-201ENSMUST00000011895 Krtap4-7Q9D732 168 aa4.82□□□□□ -1.64
Sptbn4-201ENSMUST00000011895 Mt1P02802 61 aaKnown RBP4.82□□□□□ -1.64
Sptbn4-201ENSMUST00000011895 2300003K06RikA2A4M0 262 aa4.78□□□□□ -1.64
Sptbn4-201ENSMUST00000011895 Herc1E9PZP8 4859 aa4.77□□□□□ -1.65
Sptbn4-201ENSMUST00000011895 Mdn1A2ANY6 5589 aaKnown RBP4.71□□□□□ -1.65
Sptbn4-201ENSMUST00000011895 Krtap4-1Q3UUY3 169 aa4.69□□□□□ -1.66
Sptbn4-201ENSMUST00000011895 Syne1Q6ZWR6 8799 aa4.66□□□□□ -1.66
Sptbn4-201ENSMUST00000011895 Gm11596B1AQB0 205 aa4.65□□□□□ -1.66
Sptbn4-201ENSMUST00000011895 Gm11564A2A4L9 201 aa4.62□□□□□ -1.67
Sptbn4-201ENSMUST00000011895 Gm11563B1AQ90 168 aa4.62□□□□□ -1.67
Sptbn4-201ENSMUST00000011895 Gm11595B1AQA7 289 aa4.62□□□□□ -1.67
Sptbn4-201ENSMUST00000011895 Krtap4-8B1AQA8 209 aa4.62□□□□□ -1.67
Sptbn4-201ENSMUST00000011895 Krtap4-9B1AQA9 244 aa4.59□□□□□ -1.67
Sptbn4-201ENSMUST00000011895 Muc5bE9Q5I3 4800 aa4.58□□□□□ -1.68
Sptbn4-201ENSMUST00000011895 Ubr4A2AN08 5180 aa4.57□□□□□ -1.68
Sptbn4-201ENSMUST00000011895 HydinQ80W93 5154 aa4.56□□□□□ -1.68
Sptbn4-201ENSMUST00000011895 Syne2Q6ZWQ0 6874 aaKnown RBP4.5□□□□□ -1.69
Sptbn4-201ENSMUST00000011895 Birc6O88738 4882 aa4.48□□□□□ -1.69
Sptbn4-201ENSMUST00000011895 Krtap4-13Q9D7P3 165 aa4.48□□□□□ -1.69
Sptbn4-201ENSMUST00000011895 Hmcn2A2AJ76 5100 aa4.44□□□□□ -1.7
Sptbn4-201ENSMUST00000011895 Abca13Q5SSE9 5034 aa4.34□□□□□ -1.71
Sptbn4-201ENSMUST00000011895 Krtap6-3A0A087WQL6 57 aa4.33□□□□□ -1.72
Sptbn4-201ENSMUST00000011895 4932415D10RikA0A1W2P6U8 4986 aa4.28□□□□□ -1.72
Sptbn4-201ENSMUST00000011895 Fsip2A2ARZ3 6995 aa4.27□□□□□ -1.73
Sptbn4-201ENSMUST00000011895 Fat4Q2PZL6 4981 aa4.25□□□□□ -1.73
Sptbn4-201ENSMUST00000011895 ObscnA2AAJ9 8891 aaKnown RBP4.22□□□□□ -1.73
Sptbn4-201ENSMUST00000011895 Krtap17-1A2A5X6 109 aa4.17□□□□□ -1.74
Sptbn4-201ENSMUST00000011895 Gm11554B1AQB2 190 aa4.13□□□□□ -1.75
Sptbn4-201ENSMUST00000011895 Rnf213E9Q555 5152 aaKnown RBP4.09□□□□□ -1.76
Sptbn4-201ENSMUST00000011895 Ush2AQ2QI47 5193 aa3.96□□□□□ -1.78
Sptbn4-201ENSMUST00000011895 SspoQ8CG65 4998 aa3.92□□□□□ -1.78
Sptbn4-201ENSMUST00000011895 Krtap20-2E9Q0A8 60 aa3.91□□□□□ -1.78
Sptbn4-201ENSMUST00000011895 1110025L11RikO09048 78 aa3.84□□□□□ -1.79
Sptbn4-201ENSMUST00000011895 Krtap6-5Q925H3 78 aa3.84□□□□□ -1.79
Sptbn4-201ENSMUST00000011895 Gm10229O08631 77 aa3.7□□□□□ -1.82
Sptbn4-201ENSMUST00000011895 Muc16A0A140LJ72 8478 aa3.63□□□□□ -1.83
Sptbn4-201ENSMUST00000011895 Eppk1Q8R0W0 6548 aa3.58□□□□□ -1.84
Sptbn4-201ENSMUST00000011895 Phgr1Q8K0G7 91 aa3.5□□□□□ -1.85
Sptbn4-201ENSMUST00000011895 Gm11555B1AQ89 175 aa3.48□□□□□ -1.85
Sptbn4-201ENSMUST00000011895 Kmt2dQ6PDK2 5588 aa3.42□□□□□ -1.86
Sptbn4-201ENSMUST00000011895 DstQ91ZU6 7393 aaKnown RBP3.39□□□□□ -1.87
Sptbn4-201ENSMUST00000011895 Macf1Q9QXZ0 7354 aaKnown RBP3.34□□□□□ -1.88
Sptbn4-201ENSMUST00000011895 NebE9Q1W3 7152 aa3.21□□□□□ -1.9
Sptbn4-201ENSMUST00000011895 Gm11559Q9D3H7 191 aa3.18□□□□□ -1.9
Sptbn4-201ENSMUST00000011895 Gm11568A2A4M2 211 aa3.15□□□□□ -1.91
Sptbn4-201ENSMUST00000011895 Krtap9-1Q64526 186 aa3.15□□□□□ -1.91
Sptbn4-201ENSMUST00000011895 Gm11567Q9D141 195 aa3.15□□□□□ -1.91
Sptbn4-201ENSMUST00000011895 Muc19Q6PZE0 7524 aa3.07□□□□□ -1.92
Sptbn4-201ENSMUST00000011895 Gm11639A0A1D5RLM8 5808 aa2.9□□□□□ -1.95
Sptbn4-201ENSMUST00000011895 Krtap6-2O08884 159 aa2.89□□□□□ -1.95
Sptbn4-201ENSMUST00000011895 Krtap5-2Q9D5Z7 189 aa2.88□□□□□ -1.95
Sptbn4-201ENSMUST00000011895 Hmcn1D3YXG0 5634 aa2.74□□□□□ -1.97
Sptbn4-201ENSMUST00000011895 Gm4553A0A1B0GSA9 284 aa2.68□□□□□ -1.98
Sptbn4-201ENSMUST00000011895 Krtap21-1Q925H4 128 aa2.62□□□□□ -1.99
Sptbn4-201ENSMUST00000011895 Gpr98Q8VHN7 6298 aaKnown RBP2.58□□□□□ -2
Sptbn4-201ENSMUST00000011895 A030005L19RikA0A1Y7VIU2 113 aa2.44□□□□□ -2.02
Sptbn4-201ENSMUST00000011895 Gm10153A0A1B0GRL1 320 aa2.42□□□□□ -2.02
Sptbn4-201ENSMUST00000011895 Gm2431E9Q8S1 172 aa2.39□□□□□ -2.03
Sptbn4-201ENSMUST00000011895 AhnakE9Q616 5656 aaKnown RBP2.35□□□□□ -2.03
Sptbn4-201ENSMUST00000011895 Gm45337A0A1B0GS71 263 aa2.3□□□□□ -2.04
Sptbn4-201ENSMUST00000011895 Gm40460A0A1B0GR10 244 aa2.26□□□□□ -2.05
Sptbn4-201ENSMUST00000011895 Gm7579A0A1B0GRJ4 243 aa2.26□□□□□ -2.05
Sptbn4-201ENSMUST00000011895 Krtap5-5Q2TA51 241 aa2.26□□□□□ -2.05
Sptbn4-201ENSMUST00000011895 Krtap5-4Q62220 223 aa2.26□□□□□ -2.05
Sptbn4-201ENSMUST00000011895 Gm39115A0A1B0GSH7 232 aa2.19□□□□□ -2.06
Sptbn4-201ENSMUST00000011895 A0A1Y7VJH8 109 aa1.8□□□□□ -2.12
Sptbn4-201ENSMUST00000011895 Gm45618A0A1B0GSA0 219 aa1.78□□□□□ -2.12
Sptbn4-201ENSMUST00000011895 Gm29735A0A1B0GT06 219 aa1.78□□□□□ -2.13
Sptbn4-201ENSMUST00000011895 A0A1Y7VLE6 161 aa1.44□□□□□ -2.18
Sptbn4-201ENSMUST00000011895 Krtap5-1Q64507 230 aa1.34□□□□□ -2.19
Sptbn4-201ENSMUST00000011895 Gm4559A4IF42 199 aa0.84□□□□□ -2.28
Sptbn4-201ENSMUST00000011895 A0A286YCP9 139 aa0.74□□□□□ -2.29
Sptbn4-201ENSMUST00000011895 A0A1Y7VJ07 166 aa0.73□□□□□ -2.29
Sptbn4-201ENSMUST00000011895 A030014E15RikA0A1Y7VJV2 120 aa0.65□□□□□ -2.31
Sptbn4-201ENSMUST00000011895 Krtap28-13A0A087WQP5 138 aa0.51□□□□□ -2.33
Sptbn4-201ENSMUST00000011895 A030003K21RikA0A1Y7VIM3 128 aa0.39□□□□□ -2.35
Sptbn4-201ENSMUST00000011895 A030005K14RikA0A1Y7VNY1 122 aa0.3□□□□□ -2.36
Sptbn4-201ENSMUST00000011895 Krtap28-10A0A1Y7VP58 119 aa0.29□□□□□ -2.36
Sptbn4-201ENSMUST00000011895 Gm6217A0A1Y7VJK9 128 aa0.24□□□□□ -2.37
Sptbn4-201ENSMUST00000011895 Gm7544A0A1Y7VJ58 118 aa-0.12□□□□□ -2.43
Retrieved 80 of 22,080 RNA–protein pairs in 98.8 ms