RNA–Protein interactions for RNA: ENSMUST00000011895.13

Sptbn4-201, Transcript of Spectrin beta chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Sptbn4, Length 8,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-201ENSMUST00000011895 Krtap4-7Q9D732 168 aa4,82□□□□□ -1,64
Sptbn4-201ENSMUST00000011895 Mt1P02802 61 aaKnown RBP4,82□□□□□ -1,64
Sptbn4-201ENSMUST00000011895 2300003K06RikA2A4M0 262 aa4,78□□□□□ -1,64
Sptbn4-201ENSMUST00000011895 Herc1E9PZP8 4859 aa4,77□□□□□ -1,65
Sptbn4-201ENSMUST00000011895 Mdn1A2ANY6 5589 aaKnown RBP4,71□□□□□ -1,65
Sptbn4-201ENSMUST00000011895 Krtap4-1Q3UUY3 169 aa4,69□□□□□ -1,66
Sptbn4-201ENSMUST00000011895 Syne1Q6ZWR6 8799 aa4,66□□□□□ -1,66
Sptbn4-201ENSMUST00000011895 Gm11596B1AQB0 205 aa4,65□□□□□ -1,66
Sptbn4-201ENSMUST00000011895 Gm11564A2A4L9 201 aa4,62□□□□□ -1,67
Sptbn4-201ENSMUST00000011895 Gm11563B1AQ90 168 aa4,62□□□□□ -1,67
Sptbn4-201ENSMUST00000011895 Gm11595B1AQA7 289 aa4,62□□□□□ -1,67
Sptbn4-201ENSMUST00000011895 Krtap4-8B1AQA8 209 aa4,62□□□□□ -1,67
Sptbn4-201ENSMUST00000011895 Krtap4-9B1AQA9 244 aa4,59□□□□□ -1,67
Sptbn4-201ENSMUST00000011895 Muc5bE9Q5I3 4800 aa4,58□□□□□ -1,68
Sptbn4-201ENSMUST00000011895 Ubr4A2AN08 5180 aa4,57□□□□□ -1,68
Sptbn4-201ENSMUST00000011895 HydinQ80W93 5154 aa4,56□□□□□ -1,68
Sptbn4-201ENSMUST00000011895 Syne2Q6ZWQ0 6874 aaKnown RBP4,5□□□□□ -1,69
Sptbn4-201ENSMUST00000011895 Birc6O88738 4882 aa4,48□□□□□ -1,69
Sptbn4-201ENSMUST00000011895 Krtap4-13Q9D7P3 165 aa4,48□□□□□ -1,69
Sptbn4-201ENSMUST00000011895 Hmcn2A2AJ76 5100 aa4,44□□□□□ -1,7
Sptbn4-201ENSMUST00000011895 Abca13Q5SSE9 5034 aa4,34□□□□□ -1,71
Sptbn4-201ENSMUST00000011895 Krtap6-3A0A087WQL6 57 aa4,33□□□□□ -1,72
Sptbn4-201ENSMUST00000011895 4932415D10RikA0A1W2P6U8 4986 aa4,28□□□□□ -1,72
Sptbn4-201ENSMUST00000011895 Fsip2A2ARZ3 6995 aa4,27□□□□□ -1,73
Sptbn4-201ENSMUST00000011895 Fat4Q2PZL6 4981 aa4,25□□□□□ -1,73
Sptbn4-201ENSMUST00000011895 ObscnA2AAJ9 8891 aaKnown RBP4,22□□□□□ -1,73
Sptbn4-201ENSMUST00000011895 Krtap17-1A2A5X6 109 aa4,17□□□□□ -1,74
Sptbn4-201ENSMUST00000011895 Gm11554B1AQB2 190 aa4,13□□□□□ -1,75
Sptbn4-201ENSMUST00000011895 Rnf213E9Q555 5152 aaKnown RBP4,09□□□□□ -1,76
Sptbn4-201ENSMUST00000011895 Ush2AQ2QI47 5193 aa3,96□□□□□ -1,78
Sptbn4-201ENSMUST00000011895 SspoQ8CG65 4998 aa3,92□□□□□ -1,78
Sptbn4-201ENSMUST00000011895 Krtap20-2E9Q0A8 60 aa3,91□□□□□ -1,78
Sptbn4-201ENSMUST00000011895 1110025L11RikO09048 78 aa3,84□□□□□ -1,79
Sptbn4-201ENSMUST00000011895 Krtap6-5Q925H3 78 aa3,84□□□□□ -1,79
Sptbn4-201ENSMUST00000011895 Gm10229O08631 77 aa3,7□□□□□ -1,82
Sptbn4-201ENSMUST00000011895 Muc16A0A140LJ72 8478 aa3,63□□□□□ -1,83
Sptbn4-201ENSMUST00000011895 Eppk1Q8R0W0 6548 aa3,58□□□□□ -1,84
Sptbn4-201ENSMUST00000011895 Phgr1Q8K0G7 91 aa3,5□□□□□ -1,85
Sptbn4-201ENSMUST00000011895 Gm11555B1AQ89 175 aa3,48□□□□□ -1,85
Sptbn4-201ENSMUST00000011895 Kmt2dQ6PDK2 5588 aa3,42□□□□□ -1,86
Sptbn4-201ENSMUST00000011895 DstQ91ZU6 7393 aaKnown RBP3,39□□□□□ -1,87
Sptbn4-201ENSMUST00000011895 Macf1Q9QXZ0 7354 aaKnown RBP3,34□□□□□ -1,88
Sptbn4-201ENSMUST00000011895 NebE9Q1W3 7152 aa3,21□□□□□ -1,9
Sptbn4-201ENSMUST00000011895 Gm11559Q9D3H7 191 aa3,18□□□□□ -1,9
Sptbn4-201ENSMUST00000011895 Gm11568A2A4M2 211 aa3,15□□□□□ -1,91
Sptbn4-201ENSMUST00000011895 Krtap9-1Q64526 186 aa3,15□□□□□ -1,91
Sptbn4-201ENSMUST00000011895 Gm11567Q9D141 195 aa3,15□□□□□ -1,91
Sptbn4-201ENSMUST00000011895 Muc19Q6PZE0 7524 aa3,07□□□□□ -1,92
Sptbn4-201ENSMUST00000011895 Gm11639A0A1D5RLM8 5808 aa2,9□□□□□ -1,95
Sptbn4-201ENSMUST00000011895 Krtap6-2O08884 159 aa2,89□□□□□ -1,95
Sptbn4-201ENSMUST00000011895 Krtap5-2Q9D5Z7 189 aa2,88□□□□□ -1,95
Sptbn4-201ENSMUST00000011895 Hmcn1D3YXG0 5634 aa2,74□□□□□ -1,97
Sptbn4-201ENSMUST00000011895 Gm4553A0A1B0GSA9 284 aa2,68□□□□□ -1,98
Sptbn4-201ENSMUST00000011895 Krtap21-1Q925H4 128 aa2,62□□□□□ -1,99
Sptbn4-201ENSMUST00000011895 Gpr98Q8VHN7 6298 aaKnown RBP2,58□□□□□ -2
Sptbn4-201ENSMUST00000011895 A030005L19RikA0A1Y7VIU2 113 aa2,44□□□□□ -2,02
Sptbn4-201ENSMUST00000011895 Gm10153A0A1B0GRL1 320 aa2,42□□□□□ -2,02
Sptbn4-201ENSMUST00000011895 Gm2431E9Q8S1 172 aa2,39□□□□□ -2,03
Sptbn4-201ENSMUST00000011895 AhnakE9Q616 5656 aaKnown RBP2,35□□□□□ -2,03
Sptbn4-201ENSMUST00000011895 Gm45337A0A1B0GS71 263 aa2,3□□□□□ -2,04
Sptbn4-201ENSMUST00000011895 Gm40460A0A1B0GR10 244 aa2,26□□□□□ -2,05
Sptbn4-201ENSMUST00000011895 Gm7579A0A1B0GRJ4 243 aa2,26□□□□□ -2,05
Sptbn4-201ENSMUST00000011895 Krtap5-5Q2TA51 241 aa2,26□□□□□ -2,05
Sptbn4-201ENSMUST00000011895 Krtap5-4Q62220 223 aa2,26□□□□□ -2,05
Sptbn4-201ENSMUST00000011895 Gm39115A0A1B0GSH7 232 aa2,19□□□□□ -2,06
Sptbn4-201ENSMUST00000011895 A0A1Y7VJH8 109 aa1,8□□□□□ -2,12
Sptbn4-201ENSMUST00000011895 Gm45618A0A1B0GSA0 219 aa1,78□□□□□ -2,12
Sptbn4-201ENSMUST00000011895 Gm29735A0A1B0GT06 219 aa1,78□□□□□ -2,13
Sptbn4-201ENSMUST00000011895 A0A1Y7VLE6 161 aa1,44□□□□□ -2,18
Sptbn4-201ENSMUST00000011895 Krtap5-1Q64507 230 aa1,34□□□□□ -2,19
Sptbn4-201ENSMUST00000011895 Gm4559A4IF42 199 aa0,84□□□□□ -2,28
Sptbn4-201ENSMUST00000011895 A0A286YCP9 139 aa0,74□□□□□ -2,29
Sptbn4-201ENSMUST00000011895 A0A1Y7VJ07 166 aa0,73□□□□□ -2,29
Sptbn4-201ENSMUST00000011895 A030014E15RikA0A1Y7VJV2 120 aa0,65□□□□□ -2,31
Sptbn4-201ENSMUST00000011895 Krtap28-13A0A087WQP5 138 aa0,51□□□□□ -2,33
Sptbn4-201ENSMUST00000011895 A030003K21RikA0A1Y7VIM3 128 aa0,39□□□□□ -2,35
Sptbn4-201ENSMUST00000011895 A030005K14RikA0A1Y7VNY1 122 aa0,3□□□□□ -2,36
Sptbn4-201ENSMUST00000011895 Krtap28-10A0A1Y7VP58 119 aa0,29□□□□□ -2,36
Sptbn4-201ENSMUST00000011895 Gm6217A0A1Y7VJK9 128 aa0,24□□□□□ -2,37
Sptbn4-201ENSMUST00000011895 Gm7544A0A1Y7VJ58 118 aa-0,12□□□□□ -2,43
Retrieved 80 of 22,080 RNA–protein pairs in 9,1 ms