RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 Lce1kJ3QP15 125 aa2.82□□□□□ -1.96
Sptbn1-202ENSMUST00000011877 Lrp2A2ARV4 4660 aa2.76□□□□□ -1.97
Sptbn1-202ENSMUST00000011877 Pkhd1l1Q80ZA4 4249 aa2.76□□□□□ -1.97
Sptbn1-202ENSMUST00000011877 Ryr2E9Q401 4966 aaKnown RBP2.74□□□□□ -1.97
Sptbn1-202ENSMUST00000011877 Ryr3A2AGL3 4863 aa2.74□□□□□ -1.97
Sptbn1-202ENSMUST00000011877 Krtap6-3A0A087WQL6 57 aa2.72□□□□□ -1.97
Sptbn1-202ENSMUST00000011877 Fat2Q5F226 4351 aa2.68□□□□□ -1.98
Sptbn1-202ENSMUST00000011877 A0A1Y7VLE6 161 aa2.64□□□□□ -1.99
Sptbn1-202ENSMUST00000011877 Krtap17-1A2A5X6 109 aa2.63□□□□□ -1.99
Sptbn1-202ENSMUST00000011877 Gm11554B1AQB2 190 aa2.62□□□□□ -1.99
Sptbn1-202ENSMUST00000011877 Fsip2A2ARZ3 6995 aa2.59□□□□□ -1.99
Sptbn1-202ENSMUST00000011877 PcloQ9QYX7 5068 aa2.59□□□□□ -1.99
Sptbn1-202ENSMUST00000011877 Krtap4-16Q91W93 202 aa2.56□□□□□ -2
Sptbn1-202ENSMUST00000011877 Birc6O88738 4882 aa2.52□□□□□ -2.01
Sptbn1-202ENSMUST00000011877 Kmt2cQ8BRH4 4903 aa2.52□□□□□ -2.01
Sptbn1-202ENSMUST00000011877 Muc5bE9Q5I3 4800 aa2.52□□□□□ -2.01
Sptbn1-202ENSMUST00000011877 Syne1Q6ZWR6 8799 aa2.48□□□□□ -2.01
Sptbn1-202ENSMUST00000011877 Mt1P02802 61 aaKnown RBP2.47□□□□□ -2.01
Sptbn1-202ENSMUST00000011877 Syne2Q6ZWQ0 6874 aaKnown RBP2.46□□□□□ -2.02
Sptbn1-202ENSMUST00000011877 A030003K21RikA0A1Y7VIM3 128 aa2.45□□□□□ -2.02
Sptbn1-202ENSMUST00000011877 Kiaa1109A2AAE1 5005 aa2.45□□□□□ -2.02
Sptbn1-202ENSMUST00000011877 Mdn1A2ANY6 5589 aaKnown RBP2.39□□□□□ -2.03
Sptbn1-202ENSMUST00000011877 HydinQ80W93 5154 aa2.38□□□□□ -2.03
Sptbn1-202ENSMUST00000011877 Krtap20-2E9Q0A8 60 aa2.37□□□□□ -2.03
Sptbn1-202ENSMUST00000011877 Eppk1Q8R0W0 6548 aa2.36□□□□□ -2.03
Sptbn1-202ENSMUST00000011877 4932415D10RikA0A1W2P6U8 4986 aa2.36□□□□□ -2.03
Sptbn1-202ENSMUST00000011877 Abca13Q5SSE9 5034 aa2.31□□□□□ -2.04
Sptbn1-202ENSMUST00000011877 ZanO88799 5376 aa2.28□□□□□ -2.05
Sptbn1-202ENSMUST00000011877 ObscnA2AAJ9 8891 aaKnown RBP2.27□□□□□ -2.05
Sptbn1-202ENSMUST00000011877 Gm6217A0A1Y7VJK9 128 aa2.27□□□□□ -2.05
Sptbn1-202ENSMUST00000011877 Hmcn2A2AJ76 5100 aa2.26□□□□□ -2.05
Sptbn1-202ENSMUST00000011877 Fat4Q2PZL6 4981 aa2.24□□□□□ -2.05
Sptbn1-202ENSMUST00000011877 Ubr4A2AN08 5180 aa2.23□□□□□ -2.05
Sptbn1-202ENSMUST00000011877 A0A1Y7VJH8 109 aa2.15□□□□□ -2.07
Sptbn1-202ENSMUST00000011877 Gm11555B1AQ89 175 aa2.15□□□□□ -2.07
Sptbn1-202ENSMUST00000011877 Rnf213E9Q555 5152 aaKnown RBP2.15□□□□□ -2.07
Sptbn1-202ENSMUST00000011877 A030005K14RikA0A1Y7VNY1 122 aa2.11□□□□□ -2.07
Sptbn1-202ENSMUST00000011877 Krtap28-10A0A1Y7VP58 119 aa2.09□□□□□ -2.08
Sptbn1-202ENSMUST00000011877 Ush2AQ2QI47 5193 aa2.08□□□□□ -2.08
Sptbn1-202ENSMUST00000011877 SspoQ8CG65 4998 aa2.08□□□□□ -2.08
Sptbn1-202ENSMUST00000011877 Muc16A0A140LJ72 8478 aa2.03□□□□□ -2.08
Sptbn1-202ENSMUST00000011877 1110025L11RikO09048 78 aa2.03□□□□□ -2.08
Sptbn1-202ENSMUST00000011877 Krtap6-5Q925H3 78 aa2.03□□□□□ -2.08
Sptbn1-202ENSMUST00000011877 Gm10229O08631 77 aa2□□□□□ -2.09
Sptbn1-202ENSMUST00000011877 Gm7544A0A1Y7VJ58 118 aa1.98□□□□□ -2.09
Sptbn1-202ENSMUST00000011877 Phgr1Q8K0G7 91 aa1.95□□□□□ -2.1
Sptbn1-202ENSMUST00000011877 A030005L19RikA0A1Y7VIU2 113 aa1.93□□□□□ -2.1
Sptbn1-202ENSMUST00000011877 DstQ91ZU6 7393 aaKnown RBP1.93□□□□□ -2.1
Sptbn1-202ENSMUST00000011877 A0A1Y7VJ07 166 aa1.9□□□□□ -2.1
Sptbn1-202ENSMUST00000011877 Krtap28-13A0A087WQP5 138 aa1.9□□□□□ -2.11
Sptbn1-202ENSMUST00000011877 NebE9Q1W3 7152 aa1.87□□□□□ -2.11
Sptbn1-202ENSMUST00000011877 Gm11559Q9D3H7 191 aa1.87□□□□□ -2.11
Sptbn1-202ENSMUST00000011877 Kmt2dQ6PDK2 5588 aa1.87□□□□□ -2.11
Sptbn1-202ENSMUST00000011877 Macf1Q9QXZ0 7354 aaKnown RBP1.81□□□□□ -2.12
Sptbn1-202ENSMUST00000011877 Gm11568A2A4M2 211 aa1.66□□□□□ -2.14
Sptbn1-202ENSMUST00000011877 Krtap9-1Q64526 186 aa1.66□□□□□ -2.14
Sptbn1-202ENSMUST00000011877 Gpr98Q8VHN7 6298 aaKnown RBP1.64□□□□□ -2.15
Sptbn1-202ENSMUST00000011877 A030014E15RikA0A1Y7VJV2 120 aa1.6□□□□□ -2.15
Sptbn1-202ENSMUST00000011877 Krtap6-2O08884 159 aa1.56□□□□□ -2.16
Sptbn1-202ENSMUST00000011877 A0A286YCP9 139 aa1.54□□□□□ -2.16
Sptbn1-202ENSMUST00000011877 Gm11639A0A1D5RLM8 5808 aa1.53□□□□□ -2.16
Sptbn1-202ENSMUST00000011877 Muc19Q6PZE0 7524 aa1.52□□□□□ -2.17
Sptbn1-202ENSMUST00000011877 Gm11567Q9D141 195 aa1.49□□□□□ -2.17
Sptbn1-202ENSMUST00000011877 Krtap5-2Q9D5Z7 189 aa1.4□□□□□ -2.19
Sptbn1-202ENSMUST00000011877 Gm4553A0A1B0GSA9 284 aa1.36□□□□□ -2.19
Sptbn1-202ENSMUST00000011877 Krtap21-1Q925H4 128 aa1.33□□□□□ -2.2
Sptbn1-202ENSMUST00000011877 Hmcn1D3YXG0 5634 aa1.25□□□□□ -2.21
Sptbn1-202ENSMUST00000011877 Gm2431E9Q8S1 172 aa1.24□□□□□ -2.21
Sptbn1-202ENSMUST00000011877 Gm10153A0A1B0GRL1 320 aa1.17□□□□□ -2.22
Sptbn1-202ENSMUST00000011877 Gm45337A0A1B0GS71 263 aa1.13□□□□□ -2.23
Sptbn1-202ENSMUST00000011877 Gm40460A0A1B0GR10 244 aa1.13□□□□□ -2.23
Sptbn1-202ENSMUST00000011877 Gm7579A0A1B0GRJ4 243 aa1.13□□□□□ -2.23
Sptbn1-202ENSMUST00000011877 Krtap5-5Q2TA51 241 aa1.13□□□□□ -2.23
Sptbn1-202ENSMUST00000011877 Krtap5-4Q62220 223 aa1.13□□□□□ -2.23
Sptbn1-202ENSMUST00000011877 AhnakE9Q616 5656 aaKnown RBP1.11□□□□□ -2.23
Sptbn1-202ENSMUST00000011877 Gm39115A0A1B0GSH7 232 aa1.09□□□□□ -2.24
Sptbn1-202ENSMUST00000011877 Gm45618A0A1B0GSA0 219 aa1.07□□□□□ -2.24
Sptbn1-202ENSMUST00000011877 Gm29735A0A1B0GT06 219 aa0.9□□□□□ -2.26
Sptbn1-202ENSMUST00000011877 Krtap5-1Q64507 230 aa0.82□□□□□ -2.28
Sptbn1-202ENSMUST00000011877 Gm4559A4IF42 199 aa0.69□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 100.8 ms