RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 FANCBQ8NB91 859 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 SMARCE1Q969G3 411 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 SRPRBQ9Y5M8 271 aaKnown RBP15.82■□□□□ 0.12
PHGDH-233ENST00000642021 A0A087X0B3 334 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 ZSCAN12O43309 604 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 DEXIO95424 95 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 SLC5A1P13866 664 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 CASP1P29466 404 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 BMS1Q14692 1282 aaKnown RBP15.82■□□□□ 0.12
PHGDH-233ENST00000642021 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 FCHSD1Q86WN1 690 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 MLKLQ8NB16 471 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 SLIT2O94813 1529 aa15.82■□□□□ 0.12
PHGDH-233ENST00000642021 NID2Q14112 1375 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 hCG_1642624A0A1W2PR95 340 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 ZRANB2O95218 330 aaKnown RBP eCLIP15.81■□□□□ 0.12
PHGDH-233ENST00000642021 PNMA6AP0CW24 399 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-233ENST00000642021 ADGRA1Q86SQ6 560 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 ZNF654Q8IZM8 581 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 MNS1Q8NEH6 495 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 DESI2Q9BSY9 194 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 PLA2G4AP47712 749 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 GNG11P61952 73 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 MTF1Q14872 753 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 SPATA20Q8TB22 786 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 SECISBP2LQ93073 1101 aaKnown RBP15.81■□□□□ 0.12
PHGDH-233ENST00000642021 EPSTI1Q96J88 318 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 SLAIN2Q9P270 581 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 HOOK1Q9UJC3 728 aaKnown RBP15.81■□□□□ 0.12
PHGDH-233ENST00000642021 IQSEC3Q9UPP2 1182 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-233ENST00000642021 WNT7AO00755 349 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 TEX33O43247 280 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 STX10O60499 249 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 NR1I3Q14994 352 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 SDR42E1Q8WUS8 393 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 MPHOSPH8Q99549 860 aa15.81■□□□□ 0.12
PHGDH-233ENST00000642021 IRX2Q9BZI1 471 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-233ENST00000642021 SEC31AO94979 1220 aaKnown RBP15.8■□□□□ 0.12
PHGDH-233ENST00000642021 ZNF579Q8NAF0 562 aaKnown RBP15.8■□□□□ 0.12
PHGDH-233ENST00000642021 ERVV-1B6SEH8 477 aa15.8■□□□□ 0.12
PHGDH-233ENST00000642021 CD44P16070 742 aaKnown RBP15.8■□□□□ 0.12
PHGDH-233ENST00000642021 SART3Q15020 963 aaKnown RBP15.8■□□□□ 0.12
PHGDH-233ENST00000642021 APTXQ7Z2E3 356 aaKnown RBP15.8■□□□□ 0.12
PHGDH-233ENST00000642021 NACAP1Q9BZK3 213 aa15.8■□□□□ 0.12
PHGDH-233ENST00000642021 VPS54Q9P1Q0 977 aa15.8■□□□□ 0.12
PHGDH-233ENST00000642021 PNPLA7Q6ZV29 1317 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 WTIPA6NIX2 430 aaPredicted RBP15.79■□□□□ 0.12
PHGDH-233ENST00000642021 EFCAB8A8MWE9 144 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 MINDY4BA8MYZ0 360 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 TULP1O00294 542 aaPredicted RBP15.79■□□□□ 0.12
PHGDH-233ENST00000642021 PRDM1O75626 825 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 AFMP43652 599 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 MAP3K9P80192 1104 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 PPARAQ07869 468 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 NUTM2AQ8IVF1 878 aaPredicted RBP15.79■□□□□ 0.12
PHGDH-233ENST00000642021 DHX58Q96C10 678 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 A0A0U1RQJ8 604 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 ERICH2A1L162 156 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 STX17P56962 302 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 PKN1Q16512 942 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 NOM1Q5C9Z4 860 aaKnown RBP15.79■□□□□ 0.12
PHGDH-233ENST00000642021 ATRIPQ8WXE1 791 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 KIFC2Q96AC6 838 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 SRRTQ9BXP5 876 aaKnown RBP15.79■□□□□ 0.12
PHGDH-233ENST00000642021 BTG4Q9NY30 223 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 RAI14Q9P0K7 980 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 LRP2BPQ9P2M1 347 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 BCL9O00512 1426 aa15.79■□□□□ 0.12
PHGDH-233ENST00000642021 KAT6BQ8WYB5 2073 aa15.78■□□□□ 0.12
PHGDH-233ENST00000642021 VGLL3A8MV65 326 aa15.78■□□□□ 0.12
PHGDH-233ENST00000642021 CASQ1P31415 396 aa15.78■□□□□ 0.12
PHGDH-233ENST00000642021 KARSQ15046 597 aaKnown RBP15.78■□□□□ 0.12
PHGDH-233ENST00000642021 SEC23AQ15436 765 aa15.78■□□□□ 0.12
PHGDH-233ENST00000642021 MRPL44Q9H9J2 332 aaKnown RBP15.78■□□□□ 0.12
PHGDH-233ENST00000642021 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-233ENST00000642021 PLCD1P51178 756 aa15.78■□□□□ 0.12
PHGDH-233ENST00000642021 KLHL10Q6JEL2 608 aa15.78■□□□□ 0.12
PHGDH-233ENST00000642021 TEX2Q8IWB9 1127 aa15.78■□□□□ 0.12
PHGDH-233ENST00000642021 SMYD4Q8IYR2 804 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-233ENST00000642021 TRIML1Q8N9V2 468 aa15.78■□□□□ 0.12
PHGDH-233ENST00000642021 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.78■□□□□ 0.12
PHGDH-233ENST00000642021 TNKSO95271 1327 aa15.77■□□□□ 0.12
PHGDH-233ENST00000642021 A0A1B0GTH6 734 aa15.77■□□□□ 0.12
PHGDH-233ENST00000642021 CCDC196A0A1B0GTZ2 297 aa15.77■□□□□ 0.12
PHGDH-233ENST00000642021 SOWAHDA6NJG2 315 aa15.77■□□□□ 0.12
PHGDH-233ENST00000642021 GNAT2P19087 354 aa15.77■□□□□ 0.12
PHGDH-233ENST00000642021 TMCO3Q6UWJ1 677 aa15.77■□□□□ 0.12
PHGDH-233ENST00000642021 HOMEZQ8IX15 550 aa15.77■□□□□ 0.12
PHGDH-233ENST00000642021 TMTC2Q8N394 836 aa15.77■□□□□ 0.12
PHGDH-233ENST00000642021 UBAC1Q9BSL1 405 aa15.77■□□□□ 0.12
PHGDH-233ENST00000642021 CYP2D7A0A087X1C5 515 aa15.77■□□□□ 0.11
PHGDH-233ENST00000642021 CYP7A1P22680 504 aa15.77■□□□□ 0.11
PHGDH-233ENST00000642021 DACH1Q9UI36 760 aa15.77■□□□□ 0.11
PHGDH-233ENST00000642021 MRFAP1Q9Y605 127 aa15.77■□□□□ 0.11
PHGDH-233ENST00000642021 MYH3P11055 1940 aa15.77■□□□□ 0.11
PHGDH-233ENST00000642021 COBLO75128 1261 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 SASH3O75995 380 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 FUT2Q10981 343 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 CPLX3Q8WVH0 158 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 PLEKHA8P1O95397 391 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms