RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 SRGAP3O43295 1099 aa18.52■□□□□ 0.56
SRRM4-204ENST00000641899 IGSF3O75054 1194 aa18.52■□□□□ 0.56
SRRM4-204ENST00000641899 GNAI3P08754 354 aa18.52■□□□□ 0.56
SRRM4-204ENST00000641899 CT47B1P0C2W7 299 aaPredicted RBP18.52■□□□□ 0.56
SRRM4-204ENST00000641899 ERVK-9P63128 1117 aa18.52■□□□□ 0.56
SRRM4-204ENST00000641899 ERVK-24P63145 666 aa18.52■□□□□ 0.56
SRRM4-204ENST00000641899 GPR142Q7Z601 462 aa18.52■□□□□ 0.56
SRRM4-204ENST00000641899 HMG20BQ9P0W2 317 aa18.52■□□□□ 0.56
SRRM4-204ENST00000641899 A0A0C4DFX4 3053 aa18.52■□□□□ 0.55
SRRM4-204ENST00000641899 HLA-DOAP06340 250 aa18.51■□□□□ 0.55
SRRM4-204ENST00000641899 TFCP2Q12800 502 aa18.51■□□□□ 0.55
SRRM4-204ENST00000641899 ZNF697Q5TEC3 545 aa18.51■□□□□ 0.55
SRRM4-204ENST00000641899 PAGR1Q9BTK6 254 aa18.51■□□□□ 0.55
SRRM4-204ENST00000641899 COL25A1Q9BXS0 654 aaPredicted RBP18.51■□□□□ 0.55
SRRM4-204ENST00000641899 LRRC26Q2I0M4 334 aa18.5■□□□□ 0.55
SRRM4-204ENST00000641899 LHX8Q68G74 356 aa18.5■□□□□ 0.55
SRRM4-204ENST00000641899 NAA16Q6N069 864 aaPredicted RBP18.5■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L2Q6R6M4 530 aa18.5■□□□□ 0.55
SRRM4-204ENST00000641899 EDC3Q96F86 508 aaKnown RBP18.5■□□□□ 0.55
SRRM4-204ENST00000641899 SENP6Q9GZR1 1112 aaPredicted RBP18.5■□□□□ 0.55
SRRM4-204ENST00000641899 IVNS1ABPQ9Y6Y0 642 aa18.5■□□□□ 0.55
SRRM4-204ENST00000641899 MYH2Q9UKX2 1941 aa18.5■□□□□ 0.55
SRRM4-204ENST00000641899 POTEB2H3BUK9 544 aa18.49■□□□□ 0.55
SRRM4-204ENST00000641899 CCND3P30281 292 aaPredicted RBP18.49■□□□□ 0.55
SRRM4-204ENST00000641899 MAP2K5Q13163 448 aa18.49■□□□□ 0.55
SRRM4-204ENST00000641899 MORN1Q5T089 497 aa18.49■□□□□ 0.55
SRRM4-204ENST00000641899 USP6NLQ92738 828 aa18.49■□□□□ 0.55
SRRM4-204ENST00000641899 TXNRD2Q9NNW7 524 aa18.49■□□□□ 0.55
SRRM4-204ENST00000641899 RBPJLQ9UBG7 517 aa18.49■□□□□ 0.55
SRRM4-204ENST00000641899 RABGAP1Q9Y3P9 1069 aa18.49■□□□□ 0.55
SRRM4-204ENST00000641899 LOC285556D6RIA3 1793 aa18.48■□□□□ 0.55
SRRM4-204ENST00000641899 CUL9Q8IWT3 2517 aa18.48■□□□□ 0.55
SRRM4-204ENST00000641899 ARID4AP29374 1257 aaPredicted RBP18.48■□□□□ 0.55
SRRM4-204ENST00000641899 ATP2B2Q01814 1243 aa18.48■□□□□ 0.55
SRRM4-204ENST00000641899 SLFN5Q08AF3 891 aa18.48■□□□□ 0.55
SRRM4-204ENST00000641899 WDR78Q5VTH9 848 aa18.48■□□□□ 0.55
SRRM4-204ENST00000641899 TBC1D9Q6ZT07 1266 aa18.48■□□□□ 0.55
SRRM4-204ENST00000641899 SH3RF3Q8TEJ3 882 aaPredicted RBP18.48■□□□□ 0.55
SRRM4-204ENST00000641899 FEZ1Q99689 392 aa18.48■□□□□ 0.55
SRRM4-204ENST00000641899 NOB1Q9ULX3 412 aaKnown RBP18.48■□□□□ 0.55
SRRM4-204ENST00000641899 PTPRFP10586 1907 aa18.48■□□□□ 0.55
SRRM4-204ENST00000641899 DDX60LQ5H9U9 1706 aaKnown RBP18.48■□□□□ 0.55
SRRM4-204ENST00000641899 PHIPQ8WWQ0 1821 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L15C9J2P7 530 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L13C9JLJ4 530 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L11C9JVI0 530 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L18D6R9N7 530 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L22D6RA61 530 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L17D6RBQ6 530 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L19D6RCP7 530 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 DNM1LO00429 736 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 CNGA1P29973 690 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP14P54578 494 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 G3BP1Q13283 466 aaKnown RBP eCLIP18.47■□□□□ 0.55
SRRM4-204ENST00000641899 RRP1BQ14684 758 aaKnown RBP18.47■□□□□ 0.55
SRRM4-204ENST00000641899 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
SRRM4-204ENST00000641899 CERS3Q8IU89 383 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 ZNF384Q8TF68 577 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 TGFBRAP1Q8WUH2 860 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 LPAR1Q92633 364 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 AATFQ9NY61 560 aaKnown RBP eCLIP18.47■□□□□ 0.55
SRRM4-204ENST00000641899 DDX20Q9UHI6 824 aaKnown RBP18.47■□□□□ 0.55
SRRM4-204ENST00000641899 ZBTB21Q9ULJ3 1066 aa18.47■□□□□ 0.55
SRRM4-204ENST00000641899 SLC15A5A6NIM6 579 aa18.46■□□□□ 0.55
SRRM4-204ENST00000641899 PPP4CP60510 307 aa18.46■□□□□ 0.55
SRRM4-204ENST00000641899 MTX1Q13505 466 aa18.46■□□□□ 0.55
SRRM4-204ENST00000641899 CCL14Q16627 93 aa18.46■□□□□ 0.55
SRRM4-204ENST00000641899 CCDC158Q5M9N0 1113 aa18.46■□□□□ 0.55
SRRM4-204ENST00000641899 ARRDC4Q8NCT1 418 aa18.46■□□□□ 0.55
SRRM4-204ENST00000641899 MEIS3Q99687 375 aa18.46■□□□□ 0.55
SRRM4-204ENST00000641899 PORCNQ9H237 461 aa18.46■□□□□ 0.55
SRRM4-204ENST00000641899 Q3C1V9 767 aa18.45■□□□□ 0.54
SRRM4-204ENST00000641899 MAPKAPK5Q8IW41 473 aa18.45■□□□□ 0.54
SRRM4-204ENST00000641899 FLT1P17948 1338 aa18.45■□□□□ 0.54
SRRM4-204ENST00000641899 GDF11O95390 407 aa18.44■□□□□ 0.54
SRRM4-204ENST00000641899 TTC39AQ5SRH9 613 aa18.44■□□□□ 0.54
SRRM4-204ENST00000641899 PI16Q6UXB8 463 aa18.44■□□□□ 0.54
SRRM4-204ENST00000641899 FAM161BQ96MY7 647 aa18.44■□□□□ 0.54
SRRM4-204ENST00000641899 GUCD1Q96NT3 240 aa18.44■□□□□ 0.54
SRRM4-204ENST00000641899 ALPK3Q96L96 1907 aa18.43■□□□□ 0.54
SRRM4-204ENST00000641899 KBTBD13C9JR72 458 aa18.43■□□□□ 0.54
SRRM4-204ENST00000641899 PTPREP23469 700 aa18.43■□□□□ 0.54
SRRM4-204ENST00000641899 MCAMP43121 646 aa18.43■□□□□ 0.54
SRRM4-204ENST00000641899 ATN1P54259 1190 aaPredicted RBP18.43■□□□□ 0.54
SRRM4-204ENST00000641899 ARHGAP45Q92619 1136 aa18.43■□□□□ 0.54
SRRM4-204ENST00000641899 SYMPKQ92797 1274 aaKnown RBP18.43■□□□□ 0.54
SRRM4-204ENST00000641899 C12orf42Q96LP6 360 aa18.43■□□□□ 0.54
SRRM4-204ENST00000641899 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
SRRM4-204ENST00000641899 SLC5A4Q9NY91 659 aa18.43■□□□□ 0.54
SRRM4-204ENST00000641899 PALD1Q9ULE6 856 aa18.43■□□□□ 0.54
SRRM4-204ENST00000641899 HOXC6P09630 235 aa18.42■□□□□ 0.54
SRRM4-204ENST00000641899 CABP5Q9NP86 173 aa18.42■□□□□ 0.54
SRRM4-204ENST00000641899 PEX10O60683 326 aa18.41■□□□□ 0.54
SRRM4-204ENST00000641899 GH2P01242 217 aa18.41■□□□□ 0.54
SRRM4-204ENST00000641899 GNAI2P04899 355 aa18.41■□□□□ 0.54
SRRM4-204ENST00000641899 RTP1P59025 263 aa18.41■□□□□ 0.54
SRRM4-204ENST00000641899 DPP9Q86TI2 863 aa18.41■□□□□ 0.54
SRRM4-204ENST00000641899 MAFAQ8NHW3 353 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms