RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 SCN9AQ15858 1988 aa19.11■□□□□ 0.65
PHGDH-216ENST00000641375 C21orf2O43822 256 aa19.11■□□□□ 0.65
PHGDH-216ENST00000641375 PLCD1P51178 756 aa19.11■□□□□ 0.65
PHGDH-216ENST00000641375 BRAPQ7Z569 592 aa19.11■□□□□ 0.65
PHGDH-216ENST00000641375 TTC6Q86TZ1 520 aa19.11■□□□□ 0.65
PHGDH-216ENST00000641375 ZNF444Q8N0Y2 327 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-216ENST00000641375 SLC26A6Q9BXS9 759 aa19.11■□□□□ 0.65
PHGDH-216ENST00000641375 SAP30BPQ9UHR5 308 aaKnown RBP19.11■□□□□ 0.65
PHGDH-216ENST00000641375 USP17L3A6NCW0 530 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 USP17L4A6NCW7 530 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 TRIM29Q14134 588 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 AOC3Q16853 763 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 CCDC93Q567U6 631 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 USP17L1Q7RTZ2 530 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 DYNLL2Q96FJ2 89 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 TFIP11Q9UBB9 837 aaKnown RBP19.1■□□□□ 0.65
PHGDH-216ENST00000641375 ZNF646O15015 1829 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-216ENST00000641375 HDLBPQ00341 1268 aaKnown RBP19.1■□□□□ 0.65
PHGDH-216ENST00000641375 TFAP4Q01664 338 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 TROAPQ12815 778 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 C16orf86Q6ZW13 317 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 DGKHQ86XP1 1220 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 LEO1Q8WVC0 666 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-216ENST00000641375 MXD3Q9BW11 206 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 TCP11L1Q9NUJ3 509 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 RBM27Q9P2N5 1060 aaKnown RBP19.1■□□□□ 0.65
PHGDH-216ENST00000641375 MYH6P13533 1939 aa19.1■□□□□ 0.65
PHGDH-216ENST00000641375 TSPY3P0CV98 308 aa19.09■□□□□ 0.65
PHGDH-216ENST00000641375 TSPY8P0CW00 308 aa19.09■□□□□ 0.65
PHGDH-216ENST00000641375 DACT2Q5SW24 774 aa19.09■□□□□ 0.65
PHGDH-216ENST00000641375 CRACR2BQ8N4Y2 399 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-216ENST00000641375 GOLGA6L4A6NEF3 574 aa19.09■□□□□ 0.65
PHGDH-216ENST00000641375 DEXIO95424 95 aa19.09■□□□□ 0.65
PHGDH-216ENST00000641375 SCNN1DP51172 638 aa19.09■□□□□ 0.65
PHGDH-216ENST00000641375 PSMD1Q99460 953 aa19.09■□□□□ 0.65
PHGDH-216ENST00000641375 PPIP5K2O43314 1243 aa19.08■□□□□ 0.65
PHGDH-216ENST00000641375 NMT2O60551 498 aa19.08■□□□□ 0.65
PHGDH-216ENST00000641375 DPEP1P16444 411 aa19.08■□□□□ 0.65
PHGDH-216ENST00000641375 OTUD7BQ6GQQ9 843 aa19.08■□□□□ 0.65
PHGDH-216ENST00000641375 NBPF11Q86T75 865 aa19.08■□□□□ 0.65
PHGDH-216ENST00000641375 ANKS1AQ92625 1134 aa19.08■□□□□ 0.65
PHGDH-216ENST00000641375 ZDHHC15Q96MV8 337 aa19.08■□□□□ 0.65
PHGDH-216ENST00000641375 RNF26Q9BY78 433 aaPredicted RBP19.08■□□□□ 0.65
PHGDH-216ENST00000641375 KCNQ5Q9NR82 932 aa19.08■□□□□ 0.65
PHGDH-216ENST00000641375 KCNA3P22001 575 aa19.08■□□□□ 0.64
PHGDH-216ENST00000641375 CRKP46108 304 aa19.08■□□□□ 0.64
PHGDH-216ENST00000641375 MRE11P49959 708 aa19.08■□□□□ 0.64
PHGDH-216ENST00000641375 KRT40Q6A162 431 aa19.08■□□□□ 0.64
PHGDH-216ENST00000641375 USP40Q9NVE5 1235 aa19.08■□□□□ 0.64
PHGDH-216ENST00000641375 POLD1P28340 1107 aa19.07■□□□□ 0.64
PHGDH-216ENST00000641375 CDK8P49336 464 aa19.07■□□□□ 0.64
PHGDH-216ENST00000641375 TGFB2P61812 414 aa19.07■□□□□ 0.64
PHGDH-216ENST00000641375 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
PHGDH-216ENST00000641375 ILDR1Q86SU0 546 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-216ENST00000641375 CTCFLQ8NI51 663 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-216ENST00000641375 KAT14Q9H8E8 782 aa19.07■□□□□ 0.64
PHGDH-216ENST00000641375 PSME4Q14997 1843 aa19.07■□□□□ 0.64
PHGDH-216ENST00000641375 WDHD1O75717 1129 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-216ENST00000641375 RASA1P20936 1047 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 AKAP17AQ02040 695 aaKnown RBP19.06■□□□□ 0.64
PHGDH-216ENST00000641375 KIF23Q02241 960 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-216ENST00000641375 RCSD1Q6JBY9 416 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 APOBEC3HQ6NTF7 200 aaKnown RBP19.06■□□□□ 0.64
PHGDH-216ENST00000641375 KIAA0825Q8IV33 1275 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 AIFM3Q96NN9 605 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 IL17RBQ9NRM6 502 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 ADAMTSL1Q8N6G6 1762 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 LETM1O95202 739 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-216ENST00000641375 PICALMQ13492 652 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 CCDC183Q5T5S1 534 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 CDC42EP5Q6NZY7 148 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 MAP3K14Q99558 947 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 MTFR1LQ9H019 292 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 VPS33BQ9H267 617 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 GJB4Q9NTQ9 266 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 RCOR1Q9UKL0 485 aa19.06■□□□□ 0.64
PHGDH-216ENST00000641375 KIF5BP33176 963 aa19.05■□□□□ 0.64
PHGDH-216ENST00000641375 KLHL34Q8N239 644 aa19.05■□□□□ 0.64
PHGDH-216ENST00000641375 SLC44A5Q8NCS7 719 aa19.05■□□□□ 0.64
PHGDH-216ENST00000641375 SERPINA10Q9UK55 444 aa19.05■□□□□ 0.64
PHGDH-216ENST00000641375 MYH8P13535 1937 aa19.05■□□□□ 0.64
PHGDH-216ENST00000641375 GNL2Q13823 731 aaKnown RBP19.05■□□□□ 0.64
PHGDH-216ENST00000641375 GAS2L3Q86XJ1 694 aa19.05■□□□□ 0.64
PHGDH-216ENST00000641375 CCDC82Q8N4S0 544 aa19.05■□□□□ 0.64
PHGDH-216ENST00000641375 USP28Q96RU2 1077 aa19.05■□□□□ 0.64
PHGDH-216ENST00000641375 GRPEL1Q9HAV7 217 aa19.05■□□□□ 0.64
PHGDH-216ENST00000641375 SYCE3A1L190 88 aa19.04■□□□□ 0.64
PHGDH-216ENST00000641375 PRPF3O43395 683 aaKnown RBP19.04■□□□□ 0.64
PHGDH-216ENST00000641375 ZBTB7AO95365 584 aa19.04■□□□□ 0.64
PHGDH-216ENST00000641375 XBP1P17861 261 aa19.04■□□□□ 0.64
PHGDH-216ENST00000641375 SAFBQ15424 915 aaKnown RBP eCLIP19.04■□□□□ 0.64
PHGDH-216ENST00000641375 MYSM1Q5VVJ2 828 aa19.04■□□□□ 0.64
PHGDH-216ENST00000641375 CMTR1Q8N1G2 835 aaKnown RBP19.04■□□□□ 0.64
PHGDH-216ENST00000641375 PIM2Q9P1W9 311 aa19.04■□□□□ 0.64
PHGDH-216ENST00000641375 LRSAM1Q6UWE0 723 aa19.03■□□□□ 0.64
PHGDH-216ENST00000641375 TMTC3Q6ZXV5 915 aa19.03■□□□□ 0.64
PHGDH-216ENST00000641375 PNMA1Q8ND90 353 aa19.03■□□□□ 0.64
PHGDH-216ENST00000641375 NEDD1Q8NHV4 660 aa19.03■□□□□ 0.64
PHGDH-216ENST00000641375 OSBPL5Q9H0X9 879 aaPredicted RBP19.03■□□□□ 0.64
PHGDH-216ENST00000641375 POLR3EQ9NVU0 708 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms