RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 TM6SF1Q9BZW5 370 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 TRIM7Q9C029 511 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 NKIRAS1Q9NYS0 192 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 CFAP157Q5JU67 520 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 FAM173BQ6P4H8 233 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 E7EWF7 191 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
MACF1-235ENST00000641104 POSTNQ15063 836 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 CABP7Q86V35 215 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 IMPACTQ9P2X3 320 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 TMTC1Q8IUR5 882 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 CPXCR1Q8N123 301 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 ERO1AQ96HE7 468 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 ANAPC4Q9UJX5 808 aa13.34□□□□□ -0.27
MACF1-235ENST00000641104 E7EVH7 732 aa13.33□□□□□ -0.27
MACF1-235ENST00000641104 PSMC4P43686 418 aa13.33□□□□□ -0.27
MACF1-235ENST00000641104 CTSWP56202 376 aa13.33□□□□□ -0.27
MACF1-235ENST00000641104 PPARAQ07869 468 aa13.33□□□□□ -0.27
MACF1-235ENST00000641104 C8orf74Q6P047 294 aa13.33□□□□□ -0.27
MACF1-235ENST00000641104 NSMFQ6X4W1 530 aa13.33□□□□□ -0.27
MACF1-235ENST00000641104 MYCT1Q8N699 235 aa13.33□□□□□ -0.27
MACF1-235ENST00000641104 DDX23Q9BUQ8 820 aaKnown RBP13.33□□□□□ -0.27
MACF1-235ENST00000641104 ODF2LQ9ULJ1 636 aa13.33□□□□□ -0.27
MACF1-235ENST00000641104 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.27
MACF1-235ENST00000641104 DDX39AO00148 427 aaKnown RBP13.33□□□□□ -0.28
MACF1-235ENST00000641104 TCP10Q12799 353 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 USH1GQ495M9 461 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 REXO1Q8N1G1 1221 aaKnown RBP13.33□□□□□ -0.28
MACF1-235ENST00000641104 RNF34Q969K3 372 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 RBSNQ9H1K0 784 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 DLGAP5Q15398 846 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 SECISBP2LQ93073 1101 aaKnown RBP13.33□□□□□ -0.28
MACF1-235ENST00000641104 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
MACF1-235ENST00000641104 KCNG1Q9UIX4 513 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 EXOC3O60645 756 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 CFBP00751 764 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 DNAJC21Q5F1R6 531 aaKnown RBP13.33□□□□□ -0.28
MACF1-235ENST00000641104 KCNJ14Q9UNX9 436 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 DNM2P50570 870 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 DYMQ7RTS9 669 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 CBX8Q9HC52 389 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 SLAIN2Q9P270 581 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 NFE2L3Q9Y4A8 694 aa13.33□□□□□ -0.28
MACF1-235ENST00000641104 KDM2BQ8NHM5 1336 aa13.32□□□□□ -0.28
MACF1-235ENST00000641104 ZNF75DP51815 510 aa13.32□□□□□ -0.28
MACF1-235ENST00000641104 IPO4Q8TEX9 1081 aaKnown RBP13.32□□□□□ -0.28
MACF1-235ENST00000641104 NT5C3AQ9H0P0 336 aa13.32□□□□□ -0.28
MACF1-235ENST00000641104 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
MACF1-235ENST00000641104 UTP11Q9Y3A2 253 aaKnown RBP13.32□□□□□ -0.28
MACF1-235ENST00000641104 INSRP06213 1382 aa13.32□□□□□ -0.28
MACF1-235ENST00000641104 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
MACF1-235ENST00000641104 MAEAQ7L5Y9 396 aa13.32□□□□□ -0.28
MACF1-235ENST00000641104 CCDC24Q8N4L8 307 aa13.32□□□□□ -0.28
MACF1-235ENST00000641104 ZHX1Q9UKY1 873 aaPredicted RBP13.32□□□□□ -0.28
MACF1-235ENST00000641104 BCRP11274 1271 aa13.32□□□□□ -0.28
MACF1-235ENST00000641104 UTP14CQ5TAP6 766 aaKnown RBP13.32□□□□□ -0.28
MACF1-235ENST00000641104 CCDC84Q86UT8 332 aaPredicted RBP13.32□□□□□ -0.28
MACF1-235ENST00000641104 STK10O94804 968 aaKnown RBP13.31□□□□□ -0.28
MACF1-235ENST00000641104 GCNT3O95395 438 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 RASA3Q14644 834 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 CLUL1Q15846 466 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 NELFBQ8WX92 580 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 SEC62Q99442 399 aaKnown RBP13.31□□□□□ -0.28
MACF1-235ENST00000641104 MRPL44Q9H9J2 332 aaKnown RBP13.31□□□□□ -0.28
MACF1-235ENST00000641104 CTTNBP2NLQ9P2B4 639 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 GINS2Q9Y248 185 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 PTPRTO14522 1441 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 ATP8A2Q9NTI2 1148 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 USP21Q9UK80 565 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 KDRP35968 1356 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 ADGRL2O95490 1459 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 DAPK3O43293 454 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
MACF1-235ENST00000641104 CHURC1Q8WUH1 139 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 TEKT1Q969V4 418 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 IQCDQ96DY2 449 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 USP40Q9NVE5 1235 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 ARHGAP6O43182 974 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 FLOT1O75955 427 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 MAGEA1P43355 309 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 UAP1Q16222 522 aaPredicted RBP13.31□□□□□ -0.28
MACF1-235ENST00000641104 FAM47AQ5JRC9 791 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 ZNF654Q8IZM8 581 aa13.31□□□□□ -0.28
MACF1-235ENST00000641104 JAK2O60674 1132 aa13.3□□□□□ -0.28
MACF1-235ENST00000641104 MCTP2Q6DN12 878 aa13.3□□□□□ -0.28
MACF1-235ENST00000641104 SMC1BQ8NDV3 1235 aa13.3□□□□□ -0.28
MACF1-235ENST00000641104 GABPB2Q8TAK5 448 aaPredicted RBP13.3□□□□□ -0.28
MACF1-235ENST00000641104 NUCKS1Q9H1E3 243 aaKnown RBP13.3□□□□□ -0.28
MACF1-235ENST00000641104 PLXNC1O60486 1568 aa13.3□□□□□ -0.28
MACF1-235ENST00000641104 MFSD14BQ5SR56 506 aa13.3□□□□□ -0.28
MACF1-235ENST00000641104 SSH3Q8TE77 659 aa13.3□□□□□ -0.28
MACF1-235ENST00000641104 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
MACF1-235ENST00000641104 TBC1D7Q9P0N9 293 aa13.3□□□□□ -0.28
MACF1-235ENST00000641104 KDM3AQ9Y4C1 1321 aa13.3□□□□□ -0.28
MACF1-235ENST00000641104 TMEM2Q9UHN6 1383 aa13.3□□□□□ -0.28
MACF1-235ENST00000641104 SMCO2A6NFE2 343 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms