RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 KIF23Q02241 960 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-208ENST00000641023 AIFM3Q96NN9 605 aa20.06■□□□□ 0.8
PHGDH-208ENST00000641023 SAP30BPQ9UHR5 308 aaKnown RBP20.06■□□□□ 0.8
PHGDH-208ENST00000641023 NBPF11Q86T75 865 aa20.06■□□□□ 0.8
PHGDH-208ENST00000641023 DGKHQ86XP1 1220 aa20.06■□□□□ 0.8
PHGDH-208ENST00000641023 SLX4Q8IY92 1834 aa20.06■□□□□ 0.8
PHGDH-208ENST00000641023 KLHL34Q8N239 644 aa20.06■□□□□ 0.8
PHGDH-208ENST00000641023 CCDC82Q8N4S0 544 aa20.06■□□□□ 0.8
PHGDH-208ENST00000641023 RNF26Q9BY78 433 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-208ENST00000641023 NMT2O60551 498 aa20.05■□□□□ 0.8
PHGDH-208ENST00000641023 TSPY3P0CV98 308 aa20.05■□□□□ 0.8
PHGDH-208ENST00000641023 TSPY8P0CW00 308 aa20.05■□□□□ 0.8
PHGDH-208ENST00000641023 AKAP17AQ02040 695 aaKnown RBP20.05■□□□□ 0.8
PHGDH-208ENST00000641023 GNL2Q13823 731 aaKnown RBP20.05■□□□□ 0.8
PHGDH-208ENST00000641023 GRIPAP1Q4V328 841 aa20.05■□□□□ 0.8
PHGDH-208ENST00000641023 STRIP1Q5VSL9 837 aa20.05■□□□□ 0.8
PHGDH-208ENST00000641023 HHIPL2Q6UWX4 724 aa20.05■□□□□ 0.8
PHGDH-208ENST00000641023 SUPT20HQ8NEM7 779 aa20.05■□□□□ 0.8
PHGDH-208ENST00000641023 MYSM1Q5VVJ2 828 aa20.04■□□□□ 0.8
PHGDH-208ENST00000641023 CTCFLQ8NI51 663 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-208ENST00000641023 TEKT1Q969V4 418 aa20.04■□□□□ 0.8
PHGDH-208ENST00000641023 TCP11L1Q9NUJ3 509 aa20.04■□□□□ 0.8
PHGDH-208ENST00000641023 NAV1Q8NEY1 1877 aa20.04■□□□□ 0.8
PHGDH-208ENST00000641023 FKBP1AP62942 108 aaKnown RBP20.04■□□□□ 0.8
PHGDH-208ENST00000641023 CMTR1Q8N1G2 835 aaKnown RBP20.04■□□□□ 0.8
PHGDH-208ENST00000641023 BICD2Q8TD16 824 aa20.04■□□□□ 0.8
PHGDH-208ENST00000641023 MXD3Q9BW11 206 aa20.04■□□□□ 0.8
PHGDH-208ENST00000641023 RTEL1Q9NZ71 1219 aa20.04■□□□□ 0.8
PHGDH-208ENST00000641023 ECE2O60344 883 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 C16orf86Q6ZW13 317 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 PGBD1Q96JS3 809 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 KAT14Q9H8E8 782 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 C10orf71Q711Q0 1435 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 KIF28PB7ZC32 967 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 SAFBQ15424 915 aaKnown RBP eCLIP20.03■□□□□ 0.8
PHGDH-208ENST00000641023 TTLL6Q8N841 843 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 ANKS1AQ92625 1134 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 MRIQ9BWK5 157 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 FTOQ9C0B1 505 aaKnown RBP eCLIP20.03■□□□□ 0.8
PHGDH-208ENST00000641023 POLR3EQ9NVU0 708 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 TAOK2Q9UL54 1235 aa20.03■□□□□ 0.8
PHGDH-208ENST00000641023 DLEC1Q9Y238 1755 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 MYH15Q9Y2K3 1946 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 XBP1P17861 261 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 GUCY1A2P33402 732 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 CDK8P49336 464 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 SCNN1DP51172 638 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 KIAA2012Q0VF49 1180 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 RCSD1Q6JBY9 416 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 CCDC125Q86Z20 511 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 IL17RBQ9NRM6 502 aa20.02■□□□□ 0.8
PHGDH-208ENST00000641023 C21orf2O43822 256 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 U2AF2P26368 475 aaKnown RBP eCLIP20.01■□□□□ 0.794e-10■■□□□ 11.5
PHGDH-208ENST00000641023 SLC44A5Q8NCS7 719 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 KCNQ5Q9NR82 932 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 USP40Q9NVE5 1235 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 USP17L3A6NCW0 530 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 USP17L4A6NCW7 530 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 UBE2Q2LH0YL09 131 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 PRPF3O43395 683 aaKnown RBP20.01■□□□□ 0.79
PHGDH-208ENST00000641023 MMP1P03956 469 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 RASA1P20936 1047 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 KIF5BP33176 963 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 NASPP49321 788 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-208ENST00000641023 PICALMQ13492 652 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 AOC3Q16853 763 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 USP17L1Q7RTZ2 530 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 KCNG4Q8TDN1 519 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 TSPY26PQ9H489 355 aa20.01■□□□□ 0.79
PHGDH-208ENST00000641023 CDK5RAP2Q96SN8 1893 aa20■□□□□ 0.79
PHGDH-208ENST00000641023 YEATS4O95619 227 aa20■□□□□ 0.79
PHGDH-208ENST00000641023 LIG1P18858 919 aa20■□□□□ 0.79
PHGDH-208ENST00000641023 ME1P48163 572 aa20■□□□□ 0.79
PHGDH-208ENST00000641023 DACT2Q5SW24 774 aa20■□□□□ 0.79
PHGDH-208ENST00000641023 TMTC3Q6ZXV5 915 aa20■□□□□ 0.79
PHGDH-208ENST00000641023 LINC00301Q8NCQ3 95 aa20■□□□□ 0.79
PHGDH-208ENST00000641023 MAP3K14Q99558 947 aa20■□□□□ 0.79
PHGDH-208ENST00000641023 DDX19AQ9NUU7 478 aaKnown RBP20■□□□□ 0.79
PHGDH-208ENST00000641023 CRKP46108 304 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 HDLBPQ00341 1268 aaKnown RBP19.99■□□□□ 0.79
PHGDH-208ENST00000641023 FUT2Q10981 343 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 STK38Q15208 465 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 SF3A1Q15459 793 aaKnown RBP19.99■□□□□ 0.79
PHGDH-208ENST00000641023 RTKN2Q8IZC4 609 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 PNMA1Q8ND90 353 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 ANP32BQ92688 251 aaKnown RBP19.99■□□□□ 0.79
PHGDH-208ENST00000641023 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.99■□□□□ 0.79
PHGDH-208ENST00000641023 PANK2Q9BZ23 570 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 DACT1Q9NYF0 836 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 WDHD1O75717 1129 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-208ENST00000641023 PLEKHA8P1O95397 391 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 CCDC93Q567U6 631 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 APOBEC3HQ6NTF7 200 aaKnown RBP19.99■□□□□ 0.79
PHGDH-208ENST00000641023 KIAA0825Q8IV33 1275 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 ZDHHC15Q96MV8 337 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 RBSNQ9H1K0 784 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 NUP62CLQ9H1M0 184 aa19.99■□□□□ 0.79
PHGDH-208ENST00000641023 SNED1Q8TER0 1413 aa19.98■□□□□ 0.79
PHGDH-208ENST00000641023 PPIP5K2O43314 1243 aa19.98■□□□□ 0.79
PHGDH-208ENST00000641023 ANO1Q5XXA6 986 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms