RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 BRMS1Q9HCU9 246 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 GOLGA6L10A0A0M3HER8 536 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 EZRP15311 586 aaKnown RBP6.49□□□□□ -1.37
RTTN-218ENST00000640408 MAP2K2P36507 400 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 ATP2B2Q01814 1243 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 PICALMQ13492 652 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 DACT2Q5SW24 774 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 C10orf67Q8IYJ2 551 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 DRC1Q96MC2 740 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 MYOZ2Q9NPC6 264 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 HOOK1Q9UJC3 728 aaKnown RBP6.49□□□□□ -1.37
RTTN-218ENST00000640408 CCDC69A6NI79 296 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 AMIGO3Q86WK7 504 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 REM2Q8IYK8 340 aaPredicted RBP6.49□□□□□ -1.37
RTTN-218ENST00000640408 PPM1EQ8WY54 764 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 GPR75-ASB3A0A0A6YYF3 556 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 FZD9O00144 591 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 NFKBIEO00221 500 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 RANBP6O60518 1105 aaKnown RBP6.49□□□□□ -1.37
RTTN-218ENST00000640408 SCNN1DP51172 638 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 USP14P54578 494 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 TRIM29Q14134 588 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 ALX1Q15699 326 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 AP1ARQ63HQ0 302 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 IQCEQ6IPM2 695 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 CHADLQ6NUI6 762 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 AATFQ9NY61 560 aaKnown RBP eCLIP6.49□□□□□ -1.37
RTTN-218ENST00000640408 TSPY3P0CV98 308 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 TSPY8P0CW00 308 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 MCAMP43121 646 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 SAFBQ15424 915 aaKnown RBP eCLIP6.49□□□□□ -1.37
RTTN-218ENST00000640408 MAP9Q49MG5 647 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 RBM46Q8TBY0 533 aaKnown RBP6.49□□□□□ -1.37
RTTN-218ENST00000640408 PITPNM2Q9BZ72 1349 aa6.49□□□□□ -1.37
RTTN-218ENST00000640408 ZNF609O15014 1411 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 RAD21O60216 631 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 SMC2O95347 1197 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 CHMLP26374 656 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 RASSF7Q02833 373 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 MECOMQ03112 1051 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 TBC1D10BQ4KMP7 808 aaPredicted RBP6.48□□□□□ -1.37
RTTN-218ENST00000640408 CATIPQ7Z7H3 387 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 RPAINQ86UA6 219 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 VGLL2Q8N8G2 317 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 MIPOL1Q8TD10 442 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 WASF1Q92558 559 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 SLC10A4Q96EP9 437 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 ESYT1Q9BSJ8 1104 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 GOLGA6L9A6NEM1 432 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 FDX1P10109 184 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 PDCP20941 246 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 CCDC73Q6ZRK6 1079 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 MIGA1Q8NAN2 632 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 MTMR14Q8NCE2 650 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 NOLC1Q14978 699 aaKnown RBP eCLIP6.48□□□□□ -1.37
RTTN-218ENST00000640408 SKIDA1Q1XH10 827 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 FOXD4L6Q3SYB3 417 aaPredicted RBP6.48□□□□□ -1.37
RTTN-218ENST00000640408 FOXD4L3Q6VB84 417 aaPredicted RBP6.48□□□□□ -1.37
RTTN-218ENST00000640408 TBC1D9Q6ZT07 1266 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 TMEM87BQ96K49 555 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 CSRNP1Q96S65 589 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 ZNF408Q9H9D4 720 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 SGSM2O43147 1006 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 NMIQ13287 307 aaPredicted RBP6.48□□□□□ -1.37
RTTN-218ENST00000640408 MICALL1Q8N3F8 863 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 KANSL2Q9H9L4 492 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.48□□□□□ -1.37
RTTN-218ENST00000640408 TCEAL9Q9UHQ7 104 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 PNMA3Q9UL41 463 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 SMC3Q9UQE7 1217 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 JAG2Q9Y219 1238 aa6.48□□□□□ -1.37
RTTN-218ENST00000640408 PRDX5P30044 214 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 CCDC12Q8WUD4 166 aaPredicted RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 TGFBRAP1Q8WUH2 860 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 NSUN4Q96CB9 384 aaKnown RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 RSRC1Q96IZ7 334 aaKnown RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 L3MBTL3Q96JM7 780 aaPredicted RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 GLT8D2Q9H1C3 349 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 KAT14Q9H8E8 782 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 DAGLAQ9Y4D2 1042 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 LY75O60449 1722 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 TOGARAM1Q9Y4F4 1720 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 MYRIPQ8NFW9 859 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 RSPH14Q9UHP6 348 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 C4AP0C0L4 1744 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 SPDYE2BA6NHP3 402 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 IFIT3O14879 490 aaKnown RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 DDNO94850 711 aaPredicted RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 SPDYE6P0CI01 402 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 CHURC1Q8WUH1 139 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 LZTS2Q9BRK4 669 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 CYP2E1P05181 493 aaPredicted RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 MAPKAPK5Q8IW41 473 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 ANKRD13AQ8IZ07 590 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 EHMT1Q9H9B1 1298 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 ZNF70Q9UC06 446 aaPredicted RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 UBR2Q8IWV8 1755 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms