RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 CASQ1P31415 396 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 TMCO3Q6UWJ1 677 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 DZIP3Q86Y13 1208 aaKnown RBP18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 UBR2Q8IWV8 1755 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 ERICH2A1L162 156 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 TADA3O75528 432 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 SPECC1LQ69YQ0 1117 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 CREBRFQ8IUR6 639 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 LZTFL1Q9NQ48 299 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 FAM53CQ9NYF3 392 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 LRP2BPQ9P2M1 347 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 ABCF2Q9UG63 623 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 CDHR2Q9BYE9 1310 aa18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 EARS2Q5JPH6 523 aaKnown RBP18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 HOOK1Q9UJC3 728 aaKnown RBP18.91■□□□□ 0.62
HNRNPU-228ENST00000640306 SOWAHDA6NJG2 315 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 SLC5A1P13866 664 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 CRACR2BQ8N4Y2 399 aaPredicted RBP18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 A0A087X0B3 334 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 WTIPA6NIX2 430 aaPredicted RBP18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 PLA2G4AP47712 749 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 SART3Q15020 963 aaKnown RBP18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 NOM1Q5C9Z4 860 aaKnown RBP18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 ZNF654Q8IZM8 581 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 NOL10Q9BSC4 688 aaKnown RBP18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 TEX13AQ9BXU3 409 aaPredicted RBP18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 CYP2D7A0A087X1C5 515 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 WNT7AO00755 349 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 ATRNO75882 1429 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 CYP19A1P11511 503 aaPredicted RBP18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 WASF1Q92558 559 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 SHISA4Q96DD7 197 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 CCDC34Q96HJ3 373 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 ZNF512BQ96KM6 892 aaPredicted RBP18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 UBAC1Q9BSL1 405 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 KRT23Q9C075 422 aa18.9■□□□□ 0.62
HNRNPU-228ENST00000640306 DHX8Q14562 1220 aaKnown RBP18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 RILPL1Q5EBL4 403 aa18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 FANCBQ8NB91 859 aa18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 MRPL44Q9H9J2 332 aaKnown RBP18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 ZNF18P17022 549 aa18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 FGFR2P21802 821 aa18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 TBX2Q13207 712 aaPredicted RBP18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 MORC3Q14149 939 aa18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 CNNM2Q9H8M5 875 aa18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 ARGLU1Q9NWB6 273 aaPredicted RBP18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 RAI14Q9P0K7 980 aa18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 PHLPP1O60346 1717 aa18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 COL16A1Q07092 1604 aaPredicted RBP18.89■□□□□ 0.61
HNRNPU-228ENST00000640306 PARP4Q9UKK3 1724 aaKnown RBP18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 ACTN4O43707 911 aaKnown RBP18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 ADGRA1Q86SQ6 560 aa18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 CCDC12Q8WUD4 166 aaPredicted RBP18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 NACAP1Q9BZK3 213 aa18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 ZCCHC17Q9NP64 241 aaKnown RBP18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 STK36Q9NRP7 1315 aa18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 DEXIO95424 95 aa18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 PPP2R3AQ06190 1150 aa18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 ALX1Q15699 326 aa18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 MLKLQ8NB16 471 aa18.88■□□□□ 0.61
HNRNPU-228ENST00000640306 CD44P16070 742 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 ENOX1Q8TC92 643 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 FOXP1Q9H334 677 aaPredicted RBP18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 BAZ2BQ9UIF8 2168 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 SUSD4Q5VX71 490 aa18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 DDX60Q8IY21 1712 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 STX10O60499 249 aa18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 TFRCP02786 760 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 CYP7A1P22680 504 aa18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 SARSP49591 514 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 AKAP17AQ02040 695 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 SRPRBQ9Y5M8 271 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-228ENST00000640306 TNKSO95271 1327 aa18.86■□□□□ 0.61
HNRNPU-228ENST00000640306 EFCAB8A8MWE9 144 aa18.86■□□□□ 0.61
HNRNPU-228ENST00000640306 SASH3O75995 380 aa18.86■□□□□ 0.61
HNRNPU-228ENST00000640306 ZNF174Q15697 407 aa18.86■□□□□ 0.61
HNRNPU-228ENST00000640306 TUBB4AP04350 444 aa18.86■□□□□ 0.61
HNRNPU-228ENST00000640306 PPARAQ07869 468 aa18.86■□□□□ 0.61
HNRNPU-228ENST00000640306 STAG1Q8WVM7 1258 aa18.86■□□□□ 0.61
HNRNPU-228ENST00000640306 V9GY48 417 aaPredicted RBP18.86■□□□□ 0.61
HNRNPU-228ENST00000640306 ECM29Q5VYK3 1845 aa18.86■□□□□ 0.61
HNRNPU-228ENST00000640306 MROH5Q6ZUA9 1318 aa18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 ZRANB2O95218 330 aaKnown RBP eCLIP18.85■□□□□ 0.612e-6■■■■□ 22.1
HNRNPU-228ENST00000640306 PLEKHA8P1O95397 391 aa18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 RBL2Q08999 1139 aa18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 SYMPKQ92797 1274 aaKnown RBP18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 PUF60Q9UHX1 559 aaKnown RBP18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 DACH1Q9UI36 760 aa18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 CCT6AP40227 531 aaKnown RBP18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 EVX2Q03828 476 aa18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 SLC4A8Q2Y0W8 1093 aa18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 IGSF22Q8N9C0 903 aa18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 BLZF1Q9H2G9 400 aa18.85■□□□□ 0.61
HNRNPU-228ENST00000640306 TRIM75PA6NK02 468 aa18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 ZBTB22O15209 634 aa18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 PLCD1P51178 756 aa18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 TRERF1Q96PN7 1200 aa18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 MAP3K9P80192 1104 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms