RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 ZNF280CQ8ND82 737 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 ZFYVE28Q9HCC9 887 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 ZCCHC17Q9NP64 241 aaKnown RBP9.8□□□□□ -0.84
PNKP-226ENST00000636840 RNF186Q9NXI6 227 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 KCNH4Q9UQ05 1017 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 AFG3L2Q9Y4W6 797 aa9.8□□□□□ -0.84
PNKP-226ENST00000636840 USP17L10C9JJH3 530 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 FOXN1O15353 648 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 GDF11O95390 407 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 GH2P01242 217 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 GJA5P36382 358 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 CDK8P49336 464 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 GABPAQ06546 454 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 SPP2Q13103 211 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 RAB3GAP1Q15042 981 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 ARHGEF6Q15052 776 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 GADL1Q6ZQY3 521 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 C16orf86Q6ZW13 317 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 CNKSR2Q8WXI2 1034 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 MS4A4AQ96JQ5 239 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 FAM227BQ96M60 508 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 WDR18Q9BV38 432 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 TMOD4Q9NZQ9 345 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 CTNNA3Q9UI47 895 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 MYH1P12882 1939 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 MYH7P12883 1935 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 CCDC171Q6TFL3 1326 aa9.79□□□□□ -0.84
PNKP-226ENST00000636840 A0A0D9SFI3 127 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 TRIM75PA6NK02 468 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 SLURP2P0DP57 97 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 CYP2D6P10635 497 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 HSPD1P10809 573 aaKnown RBP9.78□□□□□ -0.84
PNKP-226ENST00000636840 SHMT1P34896 483 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 USP14P54578 494 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 TAF1CQ15572 869 aaPredicted RBP9.78□□□□□ -0.84
PNKP-226ENST00000636840 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 CCDC129Q6ZRS4 1044 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 KIAA1211Q6ZU35 1233 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 TMEM179Q6ZVK1 233 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 ANKRD23Q86SG2 305 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 BRI3BPQ8WY22 251 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 DYNLL2Q96FJ2 89 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 SH2D4AQ9H788 454 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 PRDM10Q9NQV6 1147 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 ZBTB21Q9ULJ3 1066 aa9.78□□□□□ -0.84
PNKP-226ENST00000636840 CYP2D7A0A087X1C5 515 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 A0A0G2JLL6 359 aaPredicted RBP9.77□□□□□ -0.85
PNKP-226ENST00000636840 BTBD19C9JJ37 291 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 ZNF213O14771 459 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 TBC1D8O95759 1140 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 FGAP02671 866 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 GSPT1P15170 499 aaKnown RBP9.77□□□□□ -0.85
PNKP-226ENST00000636840 OSBPP22059 807 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 CHMLP26374 656 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 LBX1P52954 281 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 BACE1P56817 501 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 PPARAQ07869 468 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 BMP2KLQ5H9B9 411 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 USP17L2Q6R6M4 530 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 PRRT2Q7Z6L0 340 aaPredicted RBP9.77□□□□□ -0.85
PNKP-226ENST00000636840 STK11IPQ8N1F8 1099 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 PROCA1Q8NCQ7 364 aaPredicted RBP9.77□□□□□ -0.85
PNKP-226ENST00000636840 FEZ1Q99689 392 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 DSCC1Q9BVC3 393 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 DNAJC18Q9H819 358 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 KANSL2Q9H9L4 492 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 ARHGEF10LQ9HCE6 1279 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 PNMA3Q9UL41 463 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 RAD50Q92878 1312 aa9.77□□□□□ -0.85
PNKP-226ENST00000636840 PDHXO00330 501 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 IGF2BP3O00425 579 aaKnown RBP eCLIP9.76□□□□□ -0.85
PNKP-226ENST00000636840 TSPY3P0CV98 308 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 TSPY8P0CW00 308 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 HSPA8P11142 646 aaKnown RBP9.76□□□□□ -0.85
PNKP-226ENST00000636840 PCP11498 1178 aaKnown RBP9.76□□□□□ -0.85
PNKP-226ENST00000636840 NT5C2P49902 561 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 RRP1BQ14684 758 aaKnown RBP9.76□□□□□ -0.85
PNKP-226ENST00000636840 KIF22Q14807 665 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 SEPT2Q15019 361 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 IMMTQ16891 758 aaKnown RBP9.76□□□□□ -0.85
PNKP-226ENST00000636840 NOM1Q5C9Z4 860 aaKnown RBP9.76□□□□□ -0.85
PNKP-226ENST00000636840 SH3D19Q5HYK7 790 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 PARK7Q99497 189 aaKnown RBP9.76□□□□□ -0.85
PNKP-226ENST00000636840 PTPN18Q99952 460 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 CFHR5Q9BXR6 569 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 RNF41Q9H4P4 317 aaPredicted RBP9.76□□□□□ -0.85
PNKP-226ENST00000636840 EPB41L4AQ9HCS5 686 aaPredicted RBP9.76□□□□□ -0.85
PNKP-226ENST00000636840 TOMM22Q9NS69 142 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 ANAPC4Q9UJX5 808 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 SLC45A1Q9Y2W3 748 aa9.76□□□□□ -0.85
PNKP-226ENST00000636840 GPR25O00155 361 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 FKTNO75072 461 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 HMGCS2P54868 508 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 ATP2B2Q01814 1243 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 MTMR2Q13614 643 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 VPS53Q5VIR6 699 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 MFSD6Q6ZSS7 791 aa9.75□□□□□ -0.85
PNKP-226ENST00000636840 ZNF589Q86UQ0 364 aaPredicted RBP9.75□□□□□ -0.85
PNKP-226ENST00000636840 CCDC84Q86UT8 332 aaPredicted RBP9.75□□□□□ -0.85
PNKP-226ENST00000636840 SLC44A5Q8NCS7 719 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms