RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 NLGN2Q8NFZ4 835 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 ZNF721Q8TF20 911 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 GATA6Q92908 595 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 FOXJ1Q92949 421 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 CCDC120Q96HB5 630 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 ZNF48Q96MX3 618 aaPredicted RBP-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 CDX2Q99626 313 aaPredicted RBP-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 SPATA5L1Q9BVQ7 753 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 RNF32Q9H0A6 362 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 NKX2-4Q9H2Z4 354 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 IGFLR1Q9H665 355 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 SYNPO2LQ9H987 977 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 TSHZ2Q9NRE2 1034 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 DNAAF2Q9NVR5 837 aaKnown RBP-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 MARK1Q9P0L2 795 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 ZNF282Q9UDV7 671 aaPredicted RBP-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 PRKAG2Q9UGJ0 569 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 MBD1Q9UIS9 605 aaPredicted RBP-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 SLC6A14Q9UN76 642 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 MAP4K5Q9Y4K4 846 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 HELZ2Q9BYK8 2649 aaKnown RBP-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 ZNF521Q96K83 1311 aa-0.44□□□□□ -2.48
CDKL5-210ENST00000636046 TCF20Q9UGU0 1960 aaKnown RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 STAB1Q9NY15 2570 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 HERC1Q15751 4861 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 A0A087WYN8 130 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 GPR42O15529 346 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 HOXA3O43365 443 aaPredicted RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 SLITRK3O94933 977 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 KIF4AO95239 1232 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 FUCA1P04066 466 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 ALDH2P05091 517 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 TGFB3P10600 412 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 KRT5P13647 590 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 JUNDP17535 347 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 RHCEP18577 417 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 TCEA1P23193 301 aaKnown RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 MYF6P23409 242 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 PHKA2P46019 1235 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 HOXA1P49639 335 aaPredicted RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 CLK3P49761 638 aaKnown RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 DLK1P80370 383 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 NEUROD1Q13562 356 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 ZNF260Q3ZCT1 412 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 CEP85LQ5SZL2 805 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 MBNL2Q5VZF2 373 aaKnown RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 ZNF772Q68DY9 489 aaPredicted RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 ABLIM2Q6H8Q1 611 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 FDX2Q6P4F2 183 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 OLFML1Q6UWY5 402 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 NHLRC1Q6VVB1 395 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 RNF111Q6ZNA4 994 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 KIAA1211Q6ZU35 1233 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 MAP4K3Q8IVH8 894 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 SLC34A3Q8N130 599 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 LGI4Q8N135 537 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 BCL6BQ8N143 479 aaPredicted RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 NLGN1Q8N2Q7 840 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 ZNF784Q8NCA9 323 aaPredicted RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 IGDCC4Q8TDY8 1250 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 MZB1Q8WU39 189 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 CACTINQ8WUQ7 758 aaKnown RBP-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 ASB11Q8WXH4 323 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 PYGO2Q9BRQ0 406 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 CRISPLD1Q9H336 500 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 TMEM134Q9H6X4 195 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 C11orf16Q9NQ32 467 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 PRR13Q9NZ81 148 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 PPP4R1LQ9P1A2 415 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 PACSIN3Q9UKS6 424 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 INVSQ9Y283 1065 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 TNXBP22105 4242 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 NAV2Q8IVL1 2488 aa-0.45□□□□□ -2.48
CDKL5-210ENST00000636046 SNED1Q8TER0 1413 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 ZNF318Q5VUA4 2279 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 A0A1B0GU03 582 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 PLSCR5A0PG75 271 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 PATE3B3GLJ2 98 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 TCP11X1B4DZS4 312 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 B4E1Z4 1266 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 GTPBP1O00178 669 aaKnown RBP-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 SYT5O00445 386 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 ADAM10O14672 748 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 EOMESO95936 686 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 CCNYL3P0C7X3 344 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 CD99P14209 185 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 LMNB1P20700 586 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 ZBTB25P24278 435 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 POLD1P28340 1107 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 SSTR3P32745 418 aaPredicted RBP-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 NR4A2P43354 598 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 ELLP55199 621 aaPredicted RBP-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 ERVFC1P60507 584 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 HOXA4Q00056 320 aaPredicted RBP-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 PLCB3Q01970 1234 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 PLAURQ03405 335 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 SETDB1Q15047 1291 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 TCEA2Q15560 299 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 DUOXA2Q1HG44 320 aa-0.46□□□□□ -2.48
CDKL5-210ENST00000636046 CYP27C1Q4G0S4 372 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms