RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 NOL10Q9BSC4 688 aaKnown RBP24.82■■□□□ 1.56
TARDBP-228ENST00000629725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.82■■□□□ 1.56
TARDBP-228ENST00000629725 C19orf81C9J6K1 198 aa24.81■■□□□ 1.56
TARDBP-228ENST00000629725 COL6A1P12109 1028 aa24.81■■□□□ 1.56
TARDBP-228ENST00000629725 ARID4AP29374 1257 aaPredicted RBP24.81■■□□□ 1.56
TARDBP-228ENST00000629725 MAPK4P31152 587 aa24.81■■□□□ 1.56
TARDBP-228ENST00000629725 CACNB2Q08289 660 aaPredicted RBP24.81■■□□□ 1.56
TARDBP-228ENST00000629725 CCAR1Q8IX12 1150 aaKnown RBP24.81■■□□□ 1.56
TARDBP-228ENST00000629725 LRP2BPQ9P2M1 347 aa24.81■■□□□ 1.56
TARDBP-228ENST00000629725 CDCA7LQ96GN5 454 aa24.8■■□□□ 1.56
TARDBP-228ENST00000629725 CDK5RAP2Q96SN8 1893 aa24.79■■□□□ 1.56
TARDBP-228ENST00000629725 USP17L10C9JJH3 530 aa24.79■■□□□ 1.56
TARDBP-228ENST00000629725 ERVK-9P63128 1117 aa24.79■■□□□ 1.56
TARDBP-228ENST00000629725 ERVK-24P63145 666 aa24.79■■□□□ 1.56
TARDBP-228ENST00000629725 LHX8Q68G74 356 aa24.79■■□□□ 1.56
TARDBP-228ENST00000629725 AATFQ9NY61 560 aaKnown RBP eCLIP24.79■■□□□ 1.56
TARDBP-228ENST00000629725 RBPJLQ9UBG7 517 aa24.79■■□□□ 1.56
TARDBP-228ENST00000629725 FOCADQ5VW36 1801 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 BAG3O95817 575 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 GNAI3P08754 354 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 CCND3P30281 292 aaPredicted RBP24.78■■□□□ 1.56
TARDBP-228ENST00000629725 RGS2P41220 211 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 MCAMP43121 646 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 MTX1Q13505 466 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 LRRC26Q2I0M4 334 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 Q3C1V9 767 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 GPR142Q7Z601 462 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 USP6NLQ92738 828 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 TRIM34Q9BYJ4 488 aa24.78■■□□□ 1.56
TARDBP-228ENST00000629725 FRMPD3Q5JV73 1810 aa24.77■■□□□ 1.56
TARDBP-228ENST00000629725 CT47B1P0C2W7 299 aaPredicted RBP24.77■■□□□ 1.56
TARDBP-228ENST00000629725 PLCG2P16885 1265 aa24.77■■□□□ 1.56
TARDBP-228ENST00000629725 JAG1P78504 1218 aa24.77■■□□□ 1.56
TARDBP-228ENST00000629725 MDM2Q00987 491 aaPredicted RBP24.77■■□□□ 1.56
TARDBP-228ENST00000629725 CCL14Q16627 93 aa24.77■■□□□ 1.56
TARDBP-228ENST00000629725 CRACR2BQ8N4Y2 399 aaPredicted RBP24.77■■□□□ 1.56
TARDBP-228ENST00000629725 GTF3C2Q8WUA4 911 aaPredicted RBP24.77■■□□□ 1.56
TARDBP-228ENST00000629725 PORCNQ9H237 461 aa24.77■■□□□ 1.56
TARDBP-228ENST00000629725 DNAJC18Q9H819 358 aa24.77■■□□□ 1.56
TARDBP-228ENST00000629725 GINM1Q9NU53 330 aa24.77■■□□□ 1.56
TARDBP-228ENST00000629725 MAST2Q6P0Q8 1798 aa24.76■■□□□ 1.55
TARDBP-228ENST00000629725 UQCRFS1P1P0C7P4 283 aa24.76■■□□□ 1.55
TARDBP-228ENST00000629725 MORN1Q5T089 497 aa24.76■■□□□ 1.55
TARDBP-228ENST00000629725 NAA16Q6N069 864 aaPredicted RBP24.76■■□□□ 1.55
TARDBP-228ENST00000629725 PLEKHH3Q7Z736 793 aa24.76■■□□□ 1.55
TARDBP-228ENST00000629725 METTL16Q86W50 562 aaKnown RBP24.76■■□□□ 1.55
TARDBP-228ENST00000629725 FOXP4Q8IVH2 680 aaPredicted RBP24.76■■□□□ 1.55
TARDBP-228ENST00000629725 TGFBRAP1Q8WUH2 860 aa24.76■■□□□ 1.55
TARDBP-228ENST00000629725 APBA2Q99767 749 aa24.76■■□□□ 1.55
TARDBP-228ENST00000629725 PAGR1Q9BTK6 254 aa24.76■■□□□ 1.55
TARDBP-228ENST00000629725 GDF11O95390 407 aa24.75■■□□□ 1.55
TARDBP-228ENST00000629725 SHROOM1Q2M3G4 852 aaPredicted RBP24.75■■□□□ 1.55
TARDBP-228ENST00000629725 MAPKAPK5Q8IW41 473 aa24.75■■□□□ 1.55
TARDBP-228ENST00000629725 TRMT2AQ8IZ69 625 aaKnown RBP24.75■■□□□ 1.55
TARDBP-228ENST00000629725 CWC22Q9HCG8 908 aaKnown RBP24.75■■□□□ 1.55
TARDBP-228ENST00000629725 FLT1P17948 1338 aa24.75■■□□□ 1.55
TARDBP-228ENST00000629725 PALD1Q9ULE6 856 aa24.74■■□□□ 1.55
TARDBP-228ENST00000629725 ZBTB21Q9ULJ3 1066 aa24.74■■□□□ 1.55
TARDBP-228ENST00000629725 CDH23Q9H251 3354 aa24.74■■□□□ 1.55
TARDBP-228ENST00000629725 ZNF316A6NFI3 1004 aaPredicted RBP24.73■■□□□ 1.55
TARDBP-228ENST00000629725 PPP4CP60510 307 aa24.73■■□□□ 1.55
TARDBP-228ENST00000629725 EMILIN3Q9NT22 766 aa24.73■■□□□ 1.55
TARDBP-228ENST00000629725 G3BP1Q13283 466 aaKnown RBP eCLIP24.72■■□□□ 1.555e-9■□□□□ 10.1
TARDBP-228ENST00000629725 USP17L2Q6R6M4 530 aa24.72■■□□□ 1.55
TARDBP-228ENST00000629725 COL25A1Q9BXS0 654 aaPredicted RBP24.72■■□□□ 1.55
TARDBP-228ENST00000629725 MYO5AQ9Y4I1 1855 aaKnown RBP24.71■■□□□ 1.55
TARDBP-228ENST00000629725 POTEB2H3BUK9 544 aa24.71■■□□□ 1.55
TARDBP-228ENST00000629725 MAP2K5Q13163 448 aa24.71■■□□□ 1.55
TARDBP-228ENST00000629725 POTEEQ6S8J3 1075 aa24.71■■□□□ 1.55
TARDBP-228ENST00000629725 EDC3Q96F86 508 aaKnown RBP24.71■■□□□ 1.55
TARDBP-228ENST00000629725 LBHD1Q9BQE6 289 aaPredicted RBP24.71■■□□□ 1.55
TARDBP-228ENST00000629725 SENP6Q9GZR1 1112 aaPredicted RBP24.71■■□□□ 1.55
TARDBP-228ENST00000629725 SNRKQ9NRH2 765 aa24.71■■□□□ 1.55
TARDBP-228ENST00000629725 PRUNE2Q8WUY3 3088 aa24.7■■□□□ 1.55
TARDBP-228ENST00000629725 HLA-DOAP06340 250 aa24.7■■□□□ 1.54
TARDBP-228ENST00000629725 FAM109BQ6ICB4 259 aaPredicted RBP24.7■■□□□ 1.54
TARDBP-228ENST00000629725 ATF7IPQ6VMQ6 1270 aa24.7■■□□□ 1.54
TARDBP-228ENST00000629725 ADGRA1Q86SQ6 560 aa24.7■■□□□ 1.54
TARDBP-228ENST00000629725 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.7■■□□□ 1.54
TARDBP-228ENST00000629725 ARHGAP45Q92619 1136 aa24.7■■□□□ 1.54
TARDBP-228ENST00000629725 RABGAP1Q9Y3P9 1069 aa24.7■■□□□ 1.54
TARDBP-228ENST00000629725 SPTBN5Q9NRC6 3674 aaKnown RBP24.7■■□□□ 1.54
TARDBP-228ENST00000629725 GLRX3O76003 335 aaKnown RBP24.69■■□□□ 1.54
TARDBP-228ENST00000629725 CCNA1P78396 465 aa24.69■■□□□ 1.54
TARDBP-228ENST00000629725 TTC39AQ5SRH9 613 aa24.69■■□□□ 1.54
TARDBP-228ENST00000629725 MFSD14CQ5VZR4 134 aa24.69■■□□□ 1.54
TARDBP-228ENST00000629725 SAP30BPQ9UHR5 308 aaKnown RBP24.69■■□□□ 1.54
TARDBP-228ENST00000629725 MYH1P12882 1939 aa24.69■■□□□ 1.54
TARDBP-228ENST00000629725 GNAI2P04899 355 aa24.68■■□□□ 1.54
TARDBP-228ENST00000629725 GUCD1Q96NT3 240 aa24.68■■□□□ 1.54
TARDBP-228ENST00000629725 NDUFB9Q9Y6M9 179 aa24.68■■□□□ 1.54
TARDBP-228ENST00000629725 PNMA6EA0A0J9YXQ4 647 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 USP17L15C9J2P7 530 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 USP17L13C9JLJ4 530 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 USP17L11C9JVI0 530 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 USP17L18D6R9N7 530 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 USP17L22D6RA61 530 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 USP17L17D6RBQ6 530 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 USP17L19D6RCP7 530 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 USP17L20D6RJB6 530 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms