RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 C19orf81C9J6K1 198 aa19.22■□□□□ 0.67
PDLIM3-213ENST00000629667 XRCC5P13010 732 aaKnown RBP19.22■□□□□ 0.67
PDLIM3-213ENST00000629667 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
PDLIM3-213ENST00000629667 HERVK_113P62684 666 aa19.22■□□□□ 0.67
PDLIM3-213ENST00000629667 PDE3AQ14432 1141 aa19.22■□□□□ 0.67
PDLIM3-213ENST00000629667 MAP3K21Q5TCX8 1036 aa19.22■□□□□ 0.67
PDLIM3-213ENST00000629667 TGFBRAP1Q8WUH2 860 aa19.22■□□□□ 0.67
PDLIM3-213ENST00000629667 USP17L10C9JJH3 530 aa19.21■□□□□ 0.67
PDLIM3-213ENST00000629667 PEX10O60683 326 aa19.21■□□□□ 0.67
PDLIM3-213ENST00000629667 GNAI2P04899 355 aa19.21■□□□□ 0.67
PDLIM3-213ENST00000629667 MAGEA10P43363 369 aaPredicted RBP19.21■□□□□ 0.67
PDLIM3-213ENST00000629667 FOXP4Q8IVH2 680 aaPredicted RBP19.21■□□□□ 0.67
PDLIM3-213ENST00000629667 MAPKAPK5Q8IW41 473 aa19.21■□□□□ 0.67
PDLIM3-213ENST00000629667 TRMT44Q8IYL2 757 aaKnown RBP19.21■□□□□ 0.67
PDLIM3-213ENST00000629667 DEFB123Q8N688 67 aa19.21■□□□□ 0.67
PDLIM3-213ENST00000629667 TXNRD2Q9NNW7 524 aa19.21■□□□□ 0.67
PDLIM3-213ENST00000629667 MYO5AQ9Y4I1 1855 aaKnown RBP19.2■□□□□ 0.66
PDLIM3-213ENST00000629667 ZKSCAN1P17029 563 aaPredicted RBP19.2■□□□□ 0.66
PDLIM3-213ENST00000629667 MAPK4P31152 587 aa19.2■□□□□ 0.66
PDLIM3-213ENST00000629667 LRIT3Q3SXY7 679 aa19.2■□□□□ 0.66
PDLIM3-213ENST00000629667 TTC39AQ5SRH9 613 aa19.2■□□□□ 0.66
PDLIM3-213ENST00000629667 TDHQ8IZJ6 230 aa19.2■□□□□ 0.66
PDLIM3-213ENST00000629667 SNRKQ9NRH2 765 aa19.2■□□□□ 0.66
PDLIM3-213ENST00000629667 GINM1Q9NU53 330 aa19.2■□□□□ 0.66
PDLIM3-213ENST00000629667 FLT1P17948 1338 aa19.2■□□□□ 0.66
PDLIM3-213ENST00000629667 PNMA6EA0A0J9YXQ4 647 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 GDF11O95390 407 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 PPP4CP60510 307 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 ERVK-9P63128 1117 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 ERVK-24P63145 666 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 JAG1P78504 1218 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 CCDC158Q5M9N0 1113 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 PAGR1Q9BTK6 254 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 UBE2OQ9C0C9 1292 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 DNAJC18Q9H819 358 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 RBPJLQ9UBG7 517 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 PALD1Q9ULE6 856 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 PFASO15067 1338 aa19.19■□□□□ 0.66
PDLIM3-213ENST00000629667 IPO8O15397 1037 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-213ENST00000629667 RGS2P41220 211 aa19.18■□□□□ 0.66
PDLIM3-213ENST00000629667 CACNB2Q08289 660 aaPredicted RBP19.18■□□□□ 0.66
PDLIM3-213ENST00000629667 METTL16Q86W50 562 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-213ENST00000629667 GTF3C2Q8WUA4 911 aaPredicted RBP19.18■□□□□ 0.66
PDLIM3-213ENST00000629667 CWC22Q9HCG8 908 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-213ENST00000629667 ZBTB21Q9ULJ3 1066 aa19.18■□□□□ 0.66
PDLIM3-213ENST00000629667 MYH1P12882 1939 aa19.17■□□□□ 0.66
PDLIM3-213ENST00000629667 HLA-DOAP06340 250 aa19.17■□□□□ 0.66
PDLIM3-213ENST00000629667 SHROOM1Q2M3G4 852 aaPredicted RBP19.17■□□□□ 0.66
PDLIM3-213ENST00000629667 Q3C1V9 767 aa19.17■□□□□ 0.66
PDLIM3-213ENST00000629667 ATF7IPQ6VMQ6 1270 aa19.17■□□□□ 0.66
PDLIM3-213ENST00000629667 Q7L0L9 218 aa19.17■□□□□ 0.66
PDLIM3-213ENST00000629667 GPR142Q7Z601 462 aa19.17■□□□□ 0.66
PDLIM3-213ENST00000629667 PORCNQ9H237 461 aa19.17■□□□□ 0.66
PDLIM3-213ENST00000629667 A0A0C4DFX4 3053 aa19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 FRMPD3Q5JV73 1810 aa19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 CCND3P30281 292 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 CCL14Q16627 93 aa19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 USP17L2Q6R6M4 530 aa19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 PLEKHH3Q7Z736 793 aa19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 ADGRA1Q86SQ6 560 aa19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 USP6NLQ92738 828 aa19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 EMILIN3Q9NT22 766 aa19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 SAP30BPQ9UHR5 308 aaKnown RBP19.16■□□□□ 0.66
PDLIM3-213ENST00000629667 CYP2E1P05181 493 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 COL6A1P12109 1028 aa19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 TRIM27P14373 513 aa19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 OS9Q13438 667 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 TNNI3KQ59H18 835 aa19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 MORN1Q5T089 497 aa19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 FRAT1Q92837 279 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 APBA2Q99767 749 aa19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 DBNDD2Q9BQY9 259 aa19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 GPR108Q9NPR9 543 aa19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 STXBP5LQ9Y2K9 1186 aa19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 FPGT-TNNI3KV9GXZ4 949 aa19.15■□□□□ 0.66
PDLIM3-213ENST00000629667 LHX8Q68G74 356 aa19.14■□□□□ 0.65
PDLIM3-213ENST00000629667 FEZ1Q99689 392 aa19.14■□□□□ 0.65
PDLIM3-213ENST00000629667 IGSF3O75054 1194 aa19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 GLRX3O76003 335 aaKnown RBP19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 GH2P01242 217 aa19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 CCNA1P78396 465 aa19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 MAP2K5Q13163 448 aa19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 ZYXQ15942 572 aaKnown RBP19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 LRRC26Q2I0M4 334 aa19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 CLUAP1Q96AJ1 413 aa19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 MTMR10Q9NXD2 777 aa19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 TNNQ9UQP3 1299 aa19.13■□□□□ 0.65
PDLIM3-213ENST00000629667 USP17L15C9J2P7 530 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 USP17L13C9JLJ4 530 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 USP17L11C9JVI0 530 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 USP17L18D6R9N7 530 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 USP17L22D6RA61 530 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 USP17L17D6RBQ6 530 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 USP17L19D6RCP7 530 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 USP17L20D6RJB6 530 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 CYP7A1P22680 504 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 ZAP70P43403 619 aa19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 DYNLL1P63167 89 aaKnown RBP19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 MDM2Q00987 491 aaPredicted RBP19.12■□□□□ 0.65
PDLIM3-213ENST00000629667 USP17L24Q0WX57 530 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms