RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 COL4A6Q14031 1691 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 SOWAHBA6NEL2 793 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 GRXCR2A6NFK2 248 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 IGHA2P01877 340 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 PCCAP05165 728 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-220ENST00000628906 HDLBPQ00341 1268 aaKnown RBP7.86□□□□□ -1.15
LINC00649-220ENST00000628906 HERC4Q5GLZ8 1057 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-220ENST00000628906 MFSD14CQ5VZR4 134 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 PSRC1Q6PGN9 363 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-220ENST00000628906 ANKRD33Q7Z3H0 272 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 FERMT2Q96AC1 680 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 RMDN1Q96DB5 314 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 APBA2Q99767 749 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 MRIQ9BWK5 157 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 UPF3BQ9BZI7 483 aaKnown RBP7.86□□□□□ -1.15
LINC00649-220ENST00000628906 UBE2ZQ9H832 354 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-220ENST00000628906 RALYQ9UKM9 306 aaKnown RBP7.86□□□□□ -1.15
LINC00649-220ENST00000628906 PCDHA11Q9Y5I1 949 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 ASPMQ8IZT6 3477 aa7.86□□□□□ -1.15
LINC00649-220ENST00000628906 GCN1Q92616 2671 aaKnown RBP7.85□□□□□ -1.15
LINC00649-220ENST00000628906 EPOPA6NHQ4 379 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 PHF20L1A8MW92 1017 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 CNGA1P29973 690 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 MAPK4P31152 587 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 NBL1P41271 181 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 MFSD14BQ5SR56 506 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 SCYL3Q8IZE3 742 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 PROCA1Q8NCQ7 364 aaPredicted RBP7.85□□□□□ -1.15
LINC00649-220ENST00000628906 TRPV1Q8NER1 839 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 TTLL11Q8NHH1 800 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 FAM151AQ8WW52 585 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 EDAQ92838 391 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 PBXIP1Q96AQ6 731 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 FSD1Q9BTV5 496 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 FLRT1Q9NZU1 646 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 PRKAG3Q9UGI9 489 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 JAG2Q9Y219 1238 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 KNSTRNQ9Y448 316 aa7.85□□□□□ -1.15
LINC00649-220ENST00000628906 PTPRFP10586 1907 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 GBF1Q92538 1859 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 SNAP23O00161 211 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 PQBP1O60828 265 aaKnown RBP7.84□□□□□ -1.15
LINC00649-220ENST00000628906 HOXB3P14651 431 aaPredicted RBP7.84□□□□□ -1.15
LINC00649-220ENST00000628906 MYOGP15173 224 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 CSF2RAP15509 400 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 RABGGTBP53611 331 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 ZP2Q05996 745 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 MAP2K5Q13163 448 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 LRRC41Q15345 812 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 PUS10Q3MIT2 529 aaKnown RBP7.84□□□□□ -1.15
LINC00649-220ENST00000628906 PTCRAQ6ISU1 281 aaPredicted RBP7.84□□□□□ -1.15
LINC00649-220ENST00000628906 APOBEC3HQ6NTF7 200 aaKnown RBP7.84□□□□□ -1.15
LINC00649-220ENST00000628906 ZNF804AQ7Z570 1209 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 EDC3Q96F86 508 aaKnown RBP7.84□□□□□ -1.15
LINC00649-220ENST00000628906 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
LINC00649-220ENST00000628906 MTIF3Q9H2K0 278 aaKnown RBP7.84□□□□□ -1.15
LINC00649-220ENST00000628906 PICK1Q9NRD5 415 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 LMCD1Q9NZU5 365 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 TBX21Q9UL17 535 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 PHF24Q9UPV7 400 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 FRYLO94915 3013 aa7.84□□□□□ -1.15
LINC00649-220ENST00000628906 TRIM75PA6NK02 468 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 DCDC2CA8MYV0 355 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 H0Y858 1186 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 LPXNO60711 386 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 ACRP10323 421 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 CYBAP13498 195 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 IRS1P35568 1242 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 PABPC4Q13310 644 aaKnown RBP eCLIP7.83□□□□□ -1.16
LINC00649-220ENST00000628906 PUM1Q14671 1186 aaKnown RBP eCLIP7.83□□□□□ -1.16
LINC00649-220ENST00000628906 TRIM67Q6ZTA4 783 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 GPR142Q7Z601 462 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 SUGP1Q8IWZ8 645 aaKnown RBP7.83□□□□□ -1.16
LINC00649-220ENST00000628906 ADSSL1Q8N142 457 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 TMEM199Q8N511 208 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 FBXL6Q8N531 539 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 CCDC191Q8NCU4 936 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 GPRC5AQ8NFJ5 357 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 ZDHHC15Q96MV8 337 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 GREM2Q9H772 168 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 TLR9Q9NR96 1032 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 TMOD2Q9NZR1 351 aa7.83□□□□□ -1.16
LINC00649-220ENST00000628906 DBF4Q9UBU7 674 aaPredicted RBP7.83□□□□□ -1.16
LINC00649-220ENST00000628906 TMEM221A6NGB7 291 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 M0R296 226 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 FGBP02675 491 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 HOXC6P09630 235 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 KCNA5P22460 613 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 IGHMBP2P38935 993 aaKnown RBP7.82□□□□□ -1.16
LINC00649-220ENST00000628906 KCNJ4P48050 445 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 NUBP1P53384 320 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 CTSWP56202 376 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 MAP3K10Q02779 954 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 CHRNDQ07001 517 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 GRB10Q13322 594 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 Q3C1V9 767 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 PLEKHH3Q7Z736 793 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 POLR3GLQ9BT43 218 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 TXNRD2Q9NNW7 524 aa7.82□□□□□ -1.16
LINC00649-220ENST00000628906 IL23AQ9NPF7 189 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms