RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 DOCK1Q14185 1865 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 CCDC171Q6TFL3 1326 aa9.31□□□□□ -0.92
NR1I3-235ENST00000628566 TESPA1A2RU30 521 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-235ENST00000628566 GSG1L2A8MUP6 293 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 MPHOSPH10O00566 681 aaKnown RBP9.3□□□□□ -0.92
NR1I3-235ENST00000628566 IRF6O14896 467 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 TRPA1O75762 1119 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 PDE4AP27815 886 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 PLCD1P51178 756 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 PPP4R3BQ5MIZ7 849 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 TATDN1Q6P1N9 297 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 CTR9Q6PD62 1173 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 CWC27Q6UX04 472 aaKnown RBP9.3□□□□□ -0.92
NR1I3-235ENST00000628566 TMEM179Q6ZVK1 233 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 IFNL1Q8IU54 200 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 ZNF280CQ8ND82 737 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 FEZ1Q99689 392 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 SH2D4AQ9H788 454 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 RNF186Q9NXI6 227 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 TMOD4Q9NZQ9 345 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 ZBTB21Q9ULJ3 1066 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 KCNH4Q9UQ05 1017 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 RAD50Q92878 1312 aa9.3□□□□□ -0.92
NR1I3-235ENST00000628566 TRIM75PA6NK02 468 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 C19orf81C9J6K1 198 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 FOXN1O15353 648 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 GDF11O95390 407 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 CHGBP05060 677 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 NT5C2P49902 561 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 USP14P54578 494 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 GABPAQ06546 454 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 NMIQ13287 307 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-235ENST00000628566 RAB3GAP1Q15042 981 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 ARHGEF6Q15052 776 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 ANKRD23Q86SG2 305 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 ZNF444Q8N0Y2 327 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-235ENST00000628566 FAM227BQ96M60 508 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 ZIC5Q96T25 663 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 SEC62Q99442 399 aaKnown RBP9.29□□□□□ -0.92
NR1I3-235ENST00000628566 WDR18Q9BV38 432 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 ARHGEF10LQ9HCE6 1279 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 PRDM10Q9NQV6 1147 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 CTNNA3Q9UI47 895 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 PNMA3Q9UL41 463 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 AFG3L2Q9Y4W6 797 aa9.29□□□□□ -0.92
NR1I3-235ENST00000628566 DDX60LQ5H9U9 1706 aaKnown RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 LAMB1P07942 1786 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 A0A0D9SFI3 127 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 A0A0G2JLL6 359 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 USP17L10C9JJH3 530 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 GH2P01242 217 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 PCP11498 1178 aaKnown RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 GSPT1P15170 499 aaKnown RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 GJA5P36382 358 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 CDK8P49336 464 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 PPARAQ07869 468 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 SPP2Q13103 211 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 TAF1CQ15572 869 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 ALX1Q15699 326 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 NOM1Q5C9Z4 860 aaKnown RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 BMP2KLQ5H9B9 411 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 GADL1Q6ZQY3 521 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 KIAA1211Q6ZU35 1233 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 PRRT2Q7Z6L0 340 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 PROCA1Q8NCQ7 364 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 BRI3BPQ8WY22 251 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 MS4A4AQ96JQ5 239 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 PARK7Q99497 189 aaKnown RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 CFHR5Q9BXR6 569 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 RNF41Q9H4P4 317 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-235ENST00000628566 DNAJC18Q9H819 358 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 SLC45A1Q9Y2W3 748 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 ZMYM6O95789 1325 aa9.28□□□□□ -0.92
NR1I3-235ENST00000628566 ROBO3Q96MS0 1386 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 ATAD5Q96QE3 1844 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 ZNF213O14771 459 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 CYP2D6P10635 497 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 HSPD1P10809 573 aaKnown RBP9.27□□□□□ -0.93
NR1I3-235ENST00000628566 HSPA8P11142 646 aaKnown RBP9.27□□□□□ -0.93
NR1I3-235ENST00000628566 OSBPP22059 807 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 SHMT1P34896 483 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 LBX1P52954 281 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 BACE1P56817 501 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 USP17L2Q6R6M4 530 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 CCDC129Q6ZRS4 1044 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 DYNLL2Q96FJ2 89 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 DSCC1Q9BVC3 393 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 KANSL2Q9H9L4 492 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 AGTPBP1Q9UPW5 1226 aa9.27□□□□□ -0.93
NR1I3-235ENST00000628566 BAZ2AQ9UIF9 1905 aaKnown RBP9.27□□□□□ -0.93
NR1I3-235ENST00000628566 CYP2D7A0A087X1C5 515 aa9.26□□□□□ -0.93
NR1I3-235ENST00000628566 BTBD19C9JJ37 291 aa9.26□□□□□ -0.93
NR1I3-235ENST00000628566 PDHXO00330 501 aa9.26□□□□□ -0.93
NR1I3-235ENST00000628566 IGF2BP3O00425 579 aaKnown RBP eCLIP9.26□□□□□ -0.93
NR1I3-235ENST00000628566 TBC1D8O95759 1140 aa9.26□□□□□ -0.93
NR1I3-235ENST00000628566 TSPY3P0CV98 308 aa9.26□□□□□ -0.93
NR1I3-235ENST00000628566 TSPY8P0CW00 308 aa9.26□□□□□ -0.93
NR1I3-235ENST00000628566 CHMLP26374 656 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms