RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SETDB1Q15047 1291 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 POSTNQ15063 836 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 C8orf74Q6P047 294 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 NSMFQ6X4W1 530 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 MYCT1Q8N699 235 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 DSCC1Q9BVC3 393 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 CFBP00751 764 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 FAM47AQ5JRC9 791 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 TAB2Q9NYJ8 693 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 NKIRAS1Q9NYS0 192 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 ATP5JP18859 108 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 SLC9C1Q4G0N8 1177 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 CABP7Q86V35 215 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 SUPT20HQ8NEM7 779 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 DDX17Q92841 729 aaKnown RBP14.27□□□□□ -0.12
SCN8A-209ENST00000627620 NOX5Q96PH1 765 aa14.27□□□□□ -0.12
SCN8A-209ENST00000627620 SEC62Q99442 399 aaKnown RBP14.27□□□□□ -0.12
SCN8A-209ENST00000627620 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.12
SCN8A-209ENST00000627620 ZNF75DP51815 510 aa14.27□□□□□ -0.13
SCN8A-209ENST00000627620 NFE2L3Q9Y4A8 694 aa14.27□□□□□ -0.13
SCN8A-209ENST00000627620 RAD51AP2Q09MP3 1159 aa14.27□□□□□ -0.13
SCN8A-209ENST00000627620 PRKG1Q13976 671 aa14.27□□□□□ -0.13
SCN8A-209ENST00000627620 BEND3Q5T5X7 828 aa14.27□□□□□ -0.13
SCN8A-209ENST00000627620 PPP1R21Q6ZMI0 780 aa14.27□□□□□ -0.13
SCN8A-209ENST00000627620 FNBP4Q8N3X1 1017 aaPredicted RBP14.27□□□□□ -0.13
SCN8A-209ENST00000627620 UBL4BQ8N7F7 174 aa14.27□□□□□ -0.13
SCN8A-209ENST00000627620 CTTNBP2Q8WZ74 1663 aa14.27□□□□□ -0.13
SCN8A-209ENST00000627620 ERO1AQ96HE7 468 aa14.27□□□□□ -0.13
SCN8A-209ENST00000627620 ERCC3P19447 782 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
SCN8A-209ENST00000627620 HOOK2Q96ED9 719 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 VPS54Q9P1Q0 977 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 ODF2LQ9ULJ1 636 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 ZMYM4Q5VZL5 1548 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 ARHGEF10O15013 1369 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 ACTN4O43707 911 aaKnown RBP14.26□□□□□ -0.13
SCN8A-209ENST00000627620 EXOC3O60645 756 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 TBC1D22AQ8WUA7 517 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 AZI2Q9H6S1 392 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 PPARAQ07869 468 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 TCIRG1Q13488 830 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 ZNF365Q70YC5 407 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 NELFCDQ8IXH7 590 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 ANAPC4Q9UJX5 808 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 NELFBQ8WX92 580 aa14.26□□□□□ -0.13
SCN8A-209ENST00000627620 GADD45BO75293 160 aaPredicted RBP14.26□□□□□ -0.13
SCN8A-209ENST00000627620 TRIM6Q9C030 488 aaPredicted RBP14.26□□□□□ -0.13
SCN8A-209ENST00000627620 GCNT3O95395 438 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 ATP5DP30049 168 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 CDAN1Q8IWY9 1227 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 CTTNBP2NLQ9P2B4 639 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 TUBB2AQ13885 445 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 REXO1Q8N1G1 1221 aaKnown RBP14.25□□□□□ -0.13
SCN8A-209ENST00000627620 TUBB2BQ9BVA1 445 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 MRPL44Q9H9J2 332 aaKnown RBP14.25□□□□□ -0.13
SCN8A-209ENST00000627620 UTP11Q9Y3A2 253 aaKnown RBP14.25□□□□□ -0.13
SCN8A-209ENST00000627620 PZPP20742 1482 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 TMTC1Q8IUR5 882 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 PROCA1Q8NCQ7 364 aaPredicted RBP14.25□□□□□ -0.13
SCN8A-209ENST00000627620 STAMQ92783 540 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 BLZF1Q9H2G9 400 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 MAST1Q9Y2H9 1570 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 KDM2BQ8NHM5 1336 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 ERVV-2B6SEH9 535 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 CTSWP56202 376 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 RPS8P62241 208 aaKnown RBP14.25□□□□□ -0.13
SCN8A-209ENST00000627620 EDC3Q96F86 508 aaKnown RBP14.25□□□□□ -0.13
SCN8A-209ENST00000627620 ARPP21Q9UBL0 812 aaPredicted RBP14.25□□□□□ -0.13
SCN8A-209ENST00000627620 DAPK3O43293 454 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 HPDP32754 393 aaPredicted RBP14.25□□□□□ -0.13
SCN8A-209ENST00000627620 CEP128Q6ZU80 1094 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 SMC1BQ8NDV3 1235 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 GTF3C6Q969F1 213 aa14.25□□□□□ -0.13
SCN8A-209ENST00000627620 CCDC94Q9BW85 323 aaPredicted RBP14.25□□□□□ -0.13
SCN8A-209ENST00000627620 PDE6BP35913 854 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 GPIHBP1Q8IV16 184 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 MRRFQ96E11 262 aaKnown RBP14.24□□□□□ -0.13
SCN8A-209ENST00000627620 U2AF2P26368 475 aaKnown RBP eCLIP14.24□□□□□ -0.13
SCN8A-209ENST00000627620 ALDH1B1P30837 517 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 MAGEA1P43355 309 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 LONRF3Q496Y0 759 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 IMPACTQ9P2X3 320 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 KIAA0232Q92628 1395 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 DLGAP5Q15398 846 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 USP40Q9NVE5 1235 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 CLUL1Q15846 466 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 CEP57Q86XR8 500 aa14.24□□□□□ -0.13
SCN8A-209ENST00000627620 VIMP08670 466 aaKnown RBP14.23□□□□□ -0.13
SCN8A-209ENST00000627620 SMCO2A6NFE2 343 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 GTF2IP78347 998 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 TM6SF1Q9BZW5 370 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 TRIM31Q9BZY9 425 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 CCDC160A6NGH7 325 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 KLHL30Q0D2K2 578 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 NIM1KQ8IY84 436 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 OGFRQ9NZT2 677 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 ZNF654Q8IZM8 581 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 CARD6Q9BX69 1037 aa14.23□□□□□ -0.13
SCN8A-209ENST00000627620 USTQ9Y2C2 406 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms