RNA–Protein interactions for RNA: ENST00000625282.2

SPTAN1-210, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 4,102 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-210ENST00000625282 A0A1W2PQ64 194 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 A0A1W2PQD8 194 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 TMCO5BA8MYB1 307 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 E7EVH7 732 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 SNRPA1P09661 255 aaKnown RBP10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 NBPF7P0C2Y1 421 aaPredicted RBP10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 PSMD2Q13200 908 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 RAD9BQ6WBX8 426 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 LINC00301Q8NCQ3 95 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 NSUN7Q8NE18 718 aaKnown RBP10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 CPS1P31327 1500 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 SRGAP2O75044 1071 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 IPO7O95373 1038 aaKnown RBP10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 NUP133Q8WUM0 1156 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 SAAL1Q96ER3 474 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 SLC40A1Q9NP59 571 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 PPANQ9NQ55 473 aaKnown RBP10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 TTF2Q9UNY4 1162 aaKnown RBP10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 ATP5J2-PTCD1G3V325 749 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 BICDL1Q6ZP65 573 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 CCDC129Q6ZRS4 1044 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 TMEM139Q8IV31 216 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 HDAC6Q9UBN7 1215 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 DACH1Q9UI36 760 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 SH3BP1Q9Y3L3 701 aa10.18□□□□□ -0.78
SPTAN1-210ENST00000625282 KCNQ3O43525 872 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 PRPF6O94906 941 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 HPDP32754 393 aaPredicted RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 DDR1Q08345 913 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 RBL2Q08999 1139 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 SF3A3Q12874 501 aaKnown RBP eCLIP10.17□□□□□ -0.784e-6■■□□□ 11.7
SPTAN1-210ENST00000625282 MSL1Q68DK7 614 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 ZNF589Q86UQ0 364 aaPredicted RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 PARP9Q8IXQ6 854 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 AMOTL1Q8IY63 956 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 SH2D3CQ8N5H7 860 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 EDC3Q96F86 508 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 THOC1Q96FV9 657 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 NEUROD6Q96NK8 337 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 NUCKS1Q9H1E3 243 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 A1CFQ9NQ94 594 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 RTEL1Q9NZ71 1219 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 MAP3K2Q9Y2U5 619 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 PCDHA5Q9Y5H7 936 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 GOLGA8KD6RF30 607 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 USP14P54578 494 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 FAM98CQ17RN3 349 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 SPATS2Q86XZ4 545 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 CCDC50Q8IVM0 306 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 MSL3Q8N5Y2 521 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 YIPF3Q9GZM5 350 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 DIP2AQ14689 1571 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 ODF2Q5BJF6 829 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 CCDC13Q8IYE1 715 aa10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 PHAXQ9H814 394 aaKnown RBP10.17□□□□□ -0.78
SPTAN1-210ENST00000625282 C3P01024 1663 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 ARHGAP23Q9P227 1491 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 PCDH11XQ9BZA7 1347 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 PCDH11YQ9BZA8 1340 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 A1BGP04217 495 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 ANO1Q5XXA6 986 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 LLPHQ9BRT6 129 aaKnown RBP10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 SAMSN1Q9NSI8 373 aaKnown RBP10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 SAR1BQ9Y6B6 198 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 COL3A1P02461 1466 aaPredicted RBP10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 CDK12Q9NYV4 1490 aaPredicted RBP10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 CASP14P31944 242 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 AARSP49588 968 aaKnown RBP eCLIP10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 CKAP4Q07065 602 aaKnown RBP10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 XAGE3Q8WTP9 111 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 DDX20Q9UHI6 824 aaKnown RBP10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 SLIT1O75093 1534 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 PNPLA6Q8IY17 1366 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 SLC8A1P32418 973 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 GUCY1A3Q02108 690 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 COPS6Q7L5N1 327 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 PNMA8AQ86V59 439 aaPredicted RBP10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 PARD3BQ8TEW8 1205 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 GJB4Q9NTQ9 266 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 ETAA1Q9NY74 926 aa10.16□□□□□ -0.78
SPTAN1-210ENST00000625282 ANKRD18BA2A2Z9 1011 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 FSBPO95073 299 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 SMTNP53814 917 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 SEC24CP53992 1094 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 TBC1D8BQ0IIM8 1120 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 ARMC3Q5W041 872 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 IQCEQ6IPM2 695 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 WDR93Q6P2C0 686 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 CNKSR2Q8WXI2 1034 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 AIDAQ96BJ3 306 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 HAUS2Q9NVX0 235 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 NDUFB9Q9Y6M9 179 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 EIF4E1BA6NMX2 242 aaKnown RBP10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 YEATS4O95619 227 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 CMA1P23946 247 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 MYO1EQ12965 1108 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 ZNF790Q6PG37 636 aa10.15□□□□□ -0.78
SPTAN1-210ENST00000625282 MMS19Q96T76 1030 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms