RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 ABCB5Q2M3G0 1257 aa15.4■□□□□ 0.06
SRSF3-206ENST00000620242 KIAA1211Q6ZU35 1233 aa15.4■□□□□ 0.06
SRSF3-206ENST00000620242 FASTKD5Q7L8L6 764 aaKnown RBP15.4■□□□□ 0.06
SRSF3-206ENST00000620242 SAGE1Q9NXZ1 904 aa15.4■□□□□ 0.06
SRSF3-206ENST00000620242 ROBO3Q96MS0 1386 aa15.39■□□□□ 0.05
SRSF3-206ENST00000620242 AOC2O75106 756 aa15.39■□□□□ 0.05
SRSF3-206ENST00000620242 TMEM179Q6ZVK1 233 aa15.39■□□□□ 0.05
SRSF3-206ENST00000620242 ZNF444Q8N0Y2 327 aaPredicted RBP15.39■□□□□ 0.05
SRSF3-206ENST00000620242 RNF41Q9H4P4 317 aaPredicted RBP15.39■□□□□ 0.05
SRSF3-206ENST00000620242 SH2D4AQ9H788 454 aa15.39■□□□□ 0.05
SRSF3-206ENST00000620242 KCNH4Q9UQ05 1017 aa15.39■□□□□ 0.05
SRSF3-206ENST00000620242 ZHX2Q9Y6X8 837 aa15.39■□□□□ 0.05
SRSF3-206ENST00000620242 THSD7BQ9C0I4 1608 aa15.39■□□□□ 0.05
SRSF3-206ENST00000620242 TESPA1A2RU30 521 aaPredicted RBP15.38■□□□□ 0.05
SRSF3-206ENST00000620242 C19orf81C9J6K1 198 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 CDK8P49336 464 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 USP14P54578 494 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 PPARAQ07869 468 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 SLC4A8Q2Y0W8 1093 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 ZNF280CQ8ND82 737 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 DNAJC18Q9H819 358 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 WBP1LQ9NX94 342 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
SRSF3-206ENST00000620242 ANAPC4Q9UJX5 808 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 ZBTB21Q9ULJ3 1066 aa15.38■□□□□ 0.05
SRSF3-206ENST00000620242 DDX60LQ5H9U9 1706 aaKnown RBP15.37■□□□□ 0.05
SRSF3-206ENST00000620242 FAM196BA6NMK8 535 aa15.37■□□□□ 0.05
SRSF3-206ENST00000620242 IRF6O14896 467 aa15.37■□□□□ 0.05
SRSF3-206ENST00000620242 CDC45O75419 566 aa15.37■□□□□ 0.05
SRSF3-206ENST00000620242 FGAP02671 866 aa15.37■□□□□ 0.05
SRSF3-206ENST00000620242 SHMT1P34896 483 aa15.37■□□□□ 0.05
SRSF3-206ENST00000620242 PABPC4Q13310 644 aaKnown RBP eCLIP15.37■□□□□ 0.05
SRSF3-206ENST00000620242 IMMTQ16891 758 aaKnown RBP15.37■□□□□ 0.05
SRSF3-206ENST00000620242 CCDC129Q6ZRS4 1044 aa15.37■□□□□ 0.05
SRSF3-206ENST00000620242 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
SRSF3-206ENST00000620242 EPB41L4AQ9HCS5 686 aaPredicted RBP15.37■□□□□ 0.05
SRSF3-206ENST00000620242 AFG3L2Q9Y4W6 797 aa15.37■□□□□ 0.05
SRSF3-206ENST00000620242 CCL15-CCL14A0A0B4J2E2 113 aa15.36■□□□□ 0.05
SRSF3-206ENST00000620242 MPHOSPH10O00566 681 aaKnown RBP15.36■□□□□ 0.05
SRSF3-206ENST00000620242 ZNF213O14771 459 aa15.36■□□□□ 0.05
SRSF3-206ENST00000620242 GH2P01242 217 aa15.36■□□□□ 0.05
SRSF3-206ENST00000620242 MKRN3Q13064 507 aaKnown RBP15.36■□□□□ 0.05
SRSF3-206ENST00000620242 CCL15Q16663 113 aa15.36■□□□□ 0.05
SRSF3-206ENST00000620242 PROCA1Q8NCQ7 364 aaPredicted RBP15.36■□□□□ 0.05
SRSF3-206ENST00000620242 KANSL2Q9H9L4 492 aa15.36■□□□□ 0.05
SRSF3-206ENST00000620242 TMOD4Q9NZQ9 345 aa15.36■□□□□ 0.05
SRSF3-206ENST00000620242 OTOFQ9HC10 1997 aa15.36■□□□□ 0.05
SRSF3-206ENST00000620242 DOCK1Q14185 1865 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 USP17L10C9JJH3 530 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 SGSM2O43147 1006 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 CYP2D6P10635 497 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 CTCFP49711 727 aaPredicted RBP15.35■□□□□ 0.05
SRSF3-206ENST00000620242 RAB3GAP1Q15042 981 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 IFNL1Q8IU54 200 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 MS4A4AQ96JQ5 239 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 CFHR5Q9BXR6 569 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 ARHGEF10LQ9HCE6 1279 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 SLC45A1Q9Y2W3 748 aa15.35■□□□□ 0.05
SRSF3-206ENST00000620242 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
SRSF3-206ENST00000620242 A0A0G2JLL6 359 aaPredicted RBP15.34■□□□□ 0.05
SRSF3-206ENST00000620242 GDF11O95390 407 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 GJA5P36382 358 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 BACE1P56817 501 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 CCDC178Q5BJE1 867 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 NOM1Q5C9Z4 860 aaKnown RBP15.34■□□□□ 0.05
SRSF3-206ENST00000620242 SH3D19Q5HYK7 790 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 MFSD6Q6ZSS7 791 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 PRRT2Q7Z6L0 340 aaPredicted RBP15.34■□□□□ 0.05
SRSF3-206ENST00000620242 ANKRD23Q86SG2 305 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 DYNLL2Q96FJ2 89 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 FEZ1Q99689 392 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 CNNM2Q9H8M5 875 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 PNMA3Q9UL41 463 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 SYNPO2Q9UMS6 1093 aa15.34■□□□□ 0.05
SRSF3-206ENST00000620242 BAZ2AQ9UIF9 1905 aaKnown RBP15.34■□□□□ 0.05
SRSF3-206ENST00000620242 CYP2D7A0A087X1C5 515 aa15.33■□□□□ 0.04
SRSF3-206ENST00000620242 TRIM75PA6NK02 468 aa15.33■□□□□ 0.04
SRSF3-206ENST00000620242 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
SRSF3-206ENST00000620242 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
SRSF3-206ENST00000620242 HSPA1AP0DMV8 641 aaKnown RBP15.33■□□□□ 0.04
SRSF3-206ENST00000620242 HSPA1BP0DMV9 641 aaKnown RBP15.33■□□□□ 0.04
SRSF3-206ENST00000620242 SPP2Q13103 211 aa15.33■□□□□ 0.04
SRSF3-206ENST00000620242 USP17L2Q6R6M4 530 aa15.33■□□□□ 0.04
SRSF3-206ENST00000620242 ESYT1Q9BSJ8 1104 aa15.33■□□□□ 0.04
SRSF3-206ENST00000620242 ZFYVE28Q9HCC9 887 aa15.33■□□□□ 0.04
SRSF3-206ENST00000620242 SIPA1L1O43166 1804 aa15.33■□□□□ 0.04
SRSF3-206ENST00000620242 LAMB1P07942 1786 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 ORC4O43929 436 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 ICA1Q05084 483 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 TRDNQ13061 729 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 AKNAD1Q5T1N1 836 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 RNF20Q5VTR2 975 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 BRI3BPQ8WY22 251 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 PARK7Q99497 189 aaKnown RBP15.32■□□□□ 0.04
SRSF3-206ENST00000620242 KIAA1683Q9H0B3 1180 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 RNF186Q9NXI6 227 aa15.32■□□□□ 0.04
SRSF3-206ENST00000620242 TSPY2A6NKD2 308 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms